RNA–Protein interactions for RNA: ENST00000539021.1

PPME1-205, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 2

Gene PPME1, Length 4,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-205ENST00000539021 NUTM2DQ5VT03 806 aaPredicted RBP10.88□□□□□ -0.67
PPME1-205ENST00000539021 CHD1LQ86WJ1 897 aa10.88□□□□□ -0.67
PPME1-205ENST00000539021 ANP32BQ92688 251 aaKnown RBP10.88□□□□□ -0.67
PPME1-205ENST00000539021 ZBTB40Q9NUA8 1239 aa10.88□□□□□ -0.67
PPME1-205ENST00000539021 FANCAO15360 1455 aa10.88□□□□□ -0.67
PPME1-205ENST00000539021 NUCB1Q02818 461 aa10.88□□□□□ -0.67
PPME1-205ENST00000539021 GGNBP2Q9H3C7 697 aa10.88□□□□□ -0.67
PPME1-205ENST00000539021 ANKRD36BQ8N2N9 1353 aa10.88□□□□□ -0.67
PPME1-205ENST00000539021 VWDEQ8N2E2 1590 aa10.88□□□□□ -0.67
PPME1-205ENST00000539021 ANKRD45Q5TZF3 282 aa10.88□□□□□ -0.67
PPME1-205ENST00000539021 MROH2AA6NES4 1674 aa10.87□□□□□ -0.67
PPME1-205ENST00000539021 ABCC11Q96J66 1382 aa10.87□□□□□ -0.67
PPME1-205ENST00000539021 SENP3Q9H4L4 574 aaPredicted RBP10.87□□□□□ -0.67
PPME1-205ENST00000539021 ADGRL1O94910 1474 aa10.87□□□□□ -0.67
PPME1-205ENST00000539021 SRPK2P78362 688 aaKnown RBP10.87□□□□□ -0.67
PPME1-205ENST00000539021 TRIM35Q9UPQ4 493 aa10.87□□□□□ -0.67
PPME1-205ENST00000539021 SETBP1Q9Y6X0 1596 aa10.87□□□□□ -0.67
PPME1-205ENST00000539021 CFAP65Q6ZU64 1925 aaKnown RBP10.87□□□□□ -0.67
PPME1-205ENST00000539021 NRXN1Q9ULB1 1477 aa10.86□□□□□ -0.67
PPME1-205ENST00000539021 EFCAB6Q5THR3 1501 aa10.86□□□□□ -0.67
PPME1-205ENST00000539021 RAB3GAP1Q15042 981 aa10.86□□□□□ -0.67
PPME1-205ENST00000539021 GGT6Q6P531 493 aa10.86□□□□□ -0.67
PPME1-205ENST00000539021 IFT172Q9UG01 1749 aa10.86□□□□□ -0.67
PPME1-205ENST00000539021 BMP2KLQ5H9B9 411 aa10.85□□□□□ -0.67
PPME1-205ENST00000539021 NCOA3Q9Y6Q9 1424 aa10.85□□□□□ -0.67
PPME1-205ENST00000539021 RRP9O43818 475 aaKnown RBP10.85□□□□□ -0.67
PPME1-205ENST00000539021 INO80Q9ULG1 1556 aaPredicted RBP10.85□□□□□ -0.67
PPME1-205ENST00000539021 CD109Q6YHK3 1445 aa10.85□□□□□ -0.67
PPME1-205ENST00000539021 IL16Q14005 1332 aa10.85□□□□□ -0.67
PPME1-205ENST00000539021 K7ELQ4 463 aaPredicted RBP10.85□□□□□ -0.67
PPME1-205ENST00000539021 USP32Q8NFA0 1604 aa10.85□□□□□ -0.67
PPME1-205ENST00000539021 GAS2L3Q86XJ1 694 aa10.84□□□□□ -0.67
PPME1-205ENST00000539021 PLEKHF1Q96S99 279 aa10.84□□□□□ -0.67
PPME1-205ENST00000539021 CHMP4BQ9H444 224 aaKnown RBP10.84□□□□□ -0.67
PPME1-205ENST00000539021 C1orf115Q9H7X2 142 aa10.84□□□□□ -0.67
PPME1-205ENST00000539021 ADGRB2O60241 1585 aa10.84□□□□□ -0.67
PPME1-205ENST00000539021 ARAP3Q8WWN8 1544 aa10.84□□□□□ -0.67
PPME1-205ENST00000539021 ERBB4Q15303 1308 aa10.84□□□□□ -0.67
PPME1-205ENST00000539021 DDIT3P35638 169 aa10.84□□□□□ -0.67
PPME1-205ENST00000539021 STK26Q9P289 416 aa10.84□□□□□ -0.67
PPME1-205ENST00000539021 DIAPH1O60610 1272 aaKnown RBP10.84□□□□□ -0.67
PPME1-205ENST00000539021 VSIG10Q8N0Z9 540 aa10.84□□□□□ -0.67
PPME1-205ENST00000539021 DDX49Q9Y6V7 483 aaKnown RBP10.84□□□□□ -0.67
PPME1-205ENST00000539021 ADGRB3O60242 1522 aa10.84□□□□□ -0.67
PPME1-205ENST00000539021 ALDH1L2Q3SY69 923 aa10.83□□□□□ -0.68
PPME1-205ENST00000539021 PPRC1Q5VV67 1664 aaKnown RBP10.83□□□□□ -0.68
PPME1-205ENST00000539021 UHRF1BP1LA0JNW5 1464 aa10.83□□□□□ -0.68
PPME1-205ENST00000539021 GCC1Q96CN9 775 aa10.83□□□□□ -0.68
PPME1-205ENST00000539021 ZC3H13Q5T200 1668 aaKnown RBP10.83□□□□□ -0.68
PPME1-205ENST00000539021 MROH1Q8NDA8 1641 aa10.83□□□□□ -0.68
PPME1-205ENST00000539021 SSFA2P28290 1259 aa10.83□□□□□ -0.68
PPME1-205ENST00000539021 NASPP49321 788 aaPredicted RBP10.83□□□□□ -0.68
PPME1-205ENST00000539021 TBC1D9Q6ZT07 1266 aa10.83□□□□□ -0.68
PPME1-205ENST00000539021 NCLP19338 710 aaKnown RBP10.82□□□□□ -0.68
PPME1-205ENST00000539021 PUS7Q96PZ0 661 aaKnown RBP10.82□□□□□ -0.68
PPME1-205ENST00000539021 TERF2IPQ9NYB0 399 aa10.82□□□□□ -0.68
PPME1-205ENST00000539021 RPGRIP1LQ68CZ1 1315 aa10.82□□□□□ -0.68
PPME1-205ENST00000539021 RBM42Q9BTD8 480 aaKnown RBP10.82□□□□□ -0.68
PPME1-205ENST00000539021 A0A1W2PP64 1363 aa10.82□□□□□ -0.68
PPME1-205ENST00000539021 VGFO15240 615 aaPredicted RBP10.82□□□□□ -0.68
PPME1-205ENST00000539021 CD2BP2O95400 341 aaKnown RBP10.82□□□□□ -0.68
PPME1-205ENST00000539021 CCDC173Q0VFZ6 552 aa10.82□□□□□ -0.68
PPME1-205ENST00000539021 ADGRB1O14514 1584 aa10.81□□□□□ -0.68
PPME1-205ENST00000539021 MSNP26038 577 aaKnown RBP10.81□□□□□ -0.68
PPME1-205ENST00000539021 CDC45O75419 566 aa10.8□□□□□ -0.68
PPME1-205ENST00000539021 ELL2O00472 640 aaPredicted RBP10.8□□□□□ -0.68
PPME1-205ENST00000539021 GAS2L2Q8NHY3 880 aa10.8□□□□□ -0.68
PPME1-205ENST00000539021 KIF2CQ99661 725 aa10.8□□□□□ -0.68
PPME1-205ENST00000539021 TULP4Q9NRJ4 1543 aa10.8□□□□□ -0.68
PPME1-205ENST00000539021 NPATQ14207 1427 aa10.79□□□□□ -0.68
PPME1-205ENST00000539021 TPM2P07951 284 aa10.79□□□□□ -0.68
PPME1-205ENST00000539021 MINK1Q8N4C8 1332 aaPredicted RBP10.79□□□□□ -0.68
PPME1-205ENST00000539021 PPLO60437 1756 aa10.79□□□□□ -0.68
PPME1-205ENST00000539021 PRKAR2BP31323 418 aa10.79□□□□□ -0.68
PPME1-205ENST00000539021 FYB1O15117 783 aa10.79□□□□□ -0.68
PPME1-205ENST00000539021 HDGFL2Q7Z4V5 671 aaPredicted RBP10.79□□□□□ -0.68
PPME1-205ENST00000539021 GLI2P10070 1586 aa10.79□□□□□ -0.68
PPME1-205ENST00000539021 BAG4O95429 457 aaKnown RBP10.79□□□□□ -0.68
PPME1-205ENST00000539021 MCTP1Q6DN14 999 aa10.79□□□□□ -0.68
PPME1-205ENST00000539021 ZNF428Q96B54 188 aa10.79□□□□□ -0.68
PPME1-205ENST00000539021 PKNOX2Q96KN3 472 aa10.79□□□□□ -0.68
PPME1-205ENST00000539021 CFAP74Q9C0B2 1584 aa10.78□□□□□ -0.68
PPME1-205ENST00000539021 PPIP5K1Q6PFW1 1433 aa10.78□□□□□ -0.68
PPME1-205ENST00000539021 ZBTB7BO15156 539 aaPredicted RBP10.78□□□□□ -0.68
PPME1-205ENST00000539021 CALD1Q05682 793 aaKnown RBP10.78□□□□□ -0.68
PPME1-205ENST00000539021 KLHL40Q2TBA0 621 aa10.78□□□□□ -0.68
PPME1-205ENST00000539021 ABCA9Q8IUA7 1624 aa10.78□□□□□ -0.68
PPME1-205ENST00000539021 PLPPR3Q6T4P5 718 aa10.78□□□□□ -0.68
PPME1-205ENST00000539021 KIAA1211Q6ZU35 1233 aa10.78□□□□□ -0.68
PPME1-205ENST00000539021 ZSCAN30Q86W11 494 aa10.78□□□□□ -0.68
PPME1-205ENST00000539021 FCHSD2O94868 740 aa10.77□□□□□ -0.68
PPME1-205ENST00000539021 THUMPD2Q9BTF0 503 aaKnown RBP10.77□□□□□ -0.68
PPME1-205ENST00000539021 LMTK2Q8IWU2 1503 aa10.77□□□□□ -0.69
PPME1-205ENST00000539021 RABEP1Q15276 862 aa10.77□□□□□ -0.69
PPME1-205ENST00000539021 CAVIN1Q6NZI2 390 aaKnown RBP10.77□□□□□ -0.69
PPME1-205ENST00000539021 NUCB2P80303 420 aa10.77□□□□□ -0.69
PPME1-205ENST00000539021 ATAD2Q6PL18 1390 aa10.76□□□□□ -0.69
PPME1-205ENST00000539021 HMOX1P09601 288 aa10.76□□□□□ -0.69
PPME1-205ENST00000539021 CFAP44Q96MT7 982 aa10.76□□□□□ -0.69
PPME1-205ENST00000539021 MRPL50Q8N5N7 158 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms