RNA–Protein interactions for RNA: ENST00000538367.5

TRA2A-211, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-211ENST00000538367 MCM5P33992 734 aa22.27■■□□□ 1.15
TRA2A-211ENST00000538367 MVPQ14764 893 aaKnown RBP22.27■■□□□ 1.15
TRA2A-211ENST00000538367 CT47B1P0C2W7 299 aaPredicted RBP22.26■■□□□ 1.15
TRA2A-211ENST00000538367 KLHL40Q2TBA0 621 aa22.26■■□□□ 1.15
TRA2A-211ENST00000538367 CSPP1Q1MSJ5 1256 aa22.25■■□□□ 1.15
TRA2A-211ENST00000538367 CCDC27Q2M243 656 aa22.25■■□□□ 1.15
TRA2A-211ENST00000538367 DYNC1I1O14576 645 aa22.25■■□□□ 1.15
TRA2A-211ENST00000538367 KIF3BO15066 747 aa22.25■■□□□ 1.15
TRA2A-211ENST00000538367 ZNF445P59923 1031 aa22.24■■□□□ 1.15
TRA2A-211ENST00000538367 NOL7Q9UMY1 257 aaKnown RBP22.24■■□□□ 1.15
TRA2A-211ENST00000538367 RLBP1P12271 317 aa22.24■■□□□ 1.15
TRA2A-211ENST00000538367 REREQ9P2R6 1566 aa22.23■■□□□ 1.15
TRA2A-211ENST00000538367 MROH1Q8NDA8 1641 aa22.23■■□□□ 1.15
TRA2A-211ENST00000538367 YEATS2Q9ULM3 1422 aa22.22■■□□□ 1.15
TRA2A-211ENST00000538367 HSP90AB1P08238 724 aaKnown RBP22.22■■□□□ 1.15
TRA2A-211ENST00000538367 KIF16BQ96L93 1317 aa22.22■■□□□ 1.15
TRA2A-211ENST00000538367 VWDEQ8N2E2 1590 aa22.21■■□□□ 1.15
TRA2A-211ENST00000538367 NEURL4Q96JN8 1562 aa22.21■■□□□ 1.15
TRA2A-211ENST00000538367 UTP14CQ5TAP6 766 aaKnown RBP22.2■■□□□ 1.14
TRA2A-211ENST00000538367 PDLIM2Q96JY6 352 aa22.2■■□□□ 1.14
TRA2A-211ENST00000538367 RUNDC1Q96C34 613 aa22.19■■□□□ 1.14
TRA2A-211ENST00000538367 TET3O43151 1660 aa22.19■■□□□ 1.14
TRA2A-211ENST00000538367 TRHP20396 242 aaPredicted RBP22.19■■□□□ 1.14
TRA2A-211ENST00000538367 ZKSCAN2Q63HK3 967 aa22.18■■□□□ 1.14
TRA2A-211ENST00000538367 TRPM2O94759 1503 aa22.16■■□□□ 1.14
TRA2A-211ENST00000538367 USP32Q8NFA0 1604 aa22.16■■□□□ 1.14
TRA2A-211ENST00000538367 DZIP1LQ8IYY4 767 aaKnown RBP22.15■■□□□ 1.14
TRA2A-211ENST00000538367 MYO3AQ8NEV4 1616 aa22.15■■□□□ 1.14
TRA2A-211ENST00000538367 ADGRB2O60241 1585 aa22.15■■□□□ 1.14
TRA2A-211ENST00000538367 K7ELQ4 463 aaPredicted RBP22.15■■□□□ 1.14
TRA2A-211ENST00000538367 DDX19BQ9UMR2 479 aa22.15■■□□□ 1.14
TRA2A-211ENST00000538367 UQCRHLA0A096LP55 91 aa22.14■■□□□ 1.13
TRA2A-211ENST00000538367 UQCRHP07919 91 aa22.14■■□□□ 1.13
TRA2A-211ENST00000538367 FAM13BQ9NYF5 915 aa22.13■■□□□ 1.13
TRA2A-211ENST00000538367 R3HCC1Q9Y3T6 440 aaKnown RBP22.13■■□□□ 1.13
TRA2A-211ENST00000538367 RBM10P98175 930 aaKnown RBP22.13■■□□□ 1.13
TRA2A-211ENST00000538367 ARHGEF40Q8TER5 1519 aa22.12■■□□□ 1.13
TRA2A-211ENST00000538367 SASS6Q6UVJ0 657 aa22.12■■□□□ 1.13
TRA2A-211ENST00000538367 FTSJ3Q8IY81 847 aaKnown RBP22.12■■□□□ 1.13
TRA2A-211ENST00000538367 ZKSCAN5Q9Y2L8 839 aa22.12■■□□□ 1.13
TRA2A-211ENST00000538367 ERVK-7P63135 1459 aa22.12■■□□□ 1.13
TRA2A-211ENST00000538367 LMTK2Q8IWU2 1503 aa22.11■■□□□ 1.13
TRA2A-211ENST00000538367 DDX49Q9Y6V7 483 aaKnown RBP22.11■■□□□ 1.13
TRA2A-211ENST00000538367 SBNO2Q9Y2G9 1366 aa22.1■■□□□ 1.13
TRA2A-211ENST00000538367 BMP2KLQ5H9B9 411 aa22.1■■□□□ 1.13
TRA2A-211ENST00000538367 BAG4O95429 457 aaKnown RBP22.09■■□□□ 1.13
TRA2A-211ENST00000538367 NCLP19338 710 aaKnown RBP22.09■■□□□ 1.13
TRA2A-211ENST00000538367 GGT6Q6P531 493 aa22.09■■□□□ 1.13
TRA2A-211ENST00000538367 TNNQ9UQP3 1299 aa22.09■■□□□ 1.13
TRA2A-211ENST00000538367 EFCAB6Q5THR3 1501 aa22.08■■□□□ 1.13
TRA2A-211ENST00000538367 NUCB1Q02818 461 aa22.08■■□□□ 1.13
TRA2A-211ENST00000538367 KIF2CQ99661 725 aa22.08■■□□□ 1.13
TRA2A-211ENST00000538367 CLTCL1P53675 1640 aa22.08■■□□□ 1.13
TRA2A-211ENST00000538367 CCDC94Q9BW85 323 aaPredicted RBP22.07■■□□□ 1.12
TRA2A-211ENST00000538367 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.07■■□□□ 1.12
TRA2A-211ENST00000538367 CCDC39Q9UFE4 941 aa22.07■■□□□ 1.12
TRA2A-211ENST00000538367 NUCB2P80303 420 aa22.07■■□□□ 1.12
TRA2A-211ENST00000538367 DMTNQ08495 405 aa22.07■■□□□ 1.12
TRA2A-211ENST00000538367 TCP11L2Q8N4U5 519 aa22.07■■□□□ 1.12
TRA2A-211ENST00000538367 ZC3H13Q5T200 1668 aaKnown RBP22.06■■□□□ 1.12
TRA2A-211ENST00000538367 AGLP35573 1532 aa22.06■■□□□ 1.12
TRA2A-211ENST00000538367 CFAP44Q96MT7 982 aa22.06■■□□□ 1.12
TRA2A-211ENST00000538367 ABCC3O15438 1527 aa22.05■■□□□ 1.12
TRA2A-211ENST00000538367 SSFA2P28290 1259 aa22.04■■□□□ 1.12
TRA2A-211ENST00000538367 PTPRTO14522 1441 aa22.04■■□□□ 1.12
TRA2A-211ENST00000538367 MYOM2P54296 1465 aa22.03■■□□□ 1.12
TRA2A-211ENST00000538367 ZSCAN23Q3MJ62 389 aa22.03■■□□□ 1.12
TRA2A-211ENST00000538367 CAMSAP1Q5T5Y3 1602 aa22.03■■□□□ 1.12
TRA2A-211ENST00000538367 SIGLEC1Q9BZZ2 1709 aa22.03■■□□□ 1.12
TRA2A-211ENST00000538367 ABCC11Q96J66 1382 aa22.03■■□□□ 1.12
TRA2A-211ENST00000538367 CYP2E1P05181 493 aaPredicted RBP22.01■■□□□ 1.11
TRA2A-211ENST00000538367 CARD14Q9BXL6 1004 aa22.01■■□□□ 1.11
TRA2A-211ENST00000538367 BCL2L13Q9BXK5 485 aa22■■□□□ 1.11
TRA2A-211ENST00000538367 ATF7IPQ6VMQ6 1270 aa22■■□□□ 1.11
TRA2A-211ENST00000538367 GTPBP4Q9BZE4 634 aaKnown RBP22■■□□□ 1.11
TRA2A-211ENST00000538367 ZBTB40Q9NUA8 1239 aa22■■□□□ 1.11
TRA2A-211ENST00000538367 NOS1P29475 1434 aa21.99■■□□□ 1.11
TRA2A-211ENST00000538367 TRIM27P14373 513 aa21.99■■□□□ 1.11
TRA2A-211ENST00000538367 XPCQ01831 940 aaPredicted RBP21.99■■□□□ 1.11
TRA2A-211ENST00000538367 PLEKHG5O94827 1062 aa21.98■■□□□ 1.11
TRA2A-211ENST00000538367 CHD1LQ86WJ1 897 aa21.98■■□□□ 1.11
TRA2A-211ENST00000538367 RBSNQ9H1K0 784 aa21.98■■□□□ 1.11
TRA2A-211ENST00000538367 LMBRD1Q9NUN5 540 aa21.98■■□□□ 1.11
TRA2A-211ENST00000538367 MED14O60244 1454 aa21.98■■□□□ 1.11
TRA2A-211ENST00000538367 PRIMPOLQ96LW4 560 aa21.98■■□□□ 1.11
TRA2A-211ENST00000538367 CWC22Q9HCG8 908 aaKnown RBP21.98■■□□□ 1.11
TRA2A-211ENST00000538367 TNNT2P45379 298 aaPredicted RBP21.97■■□□□ 1.11
TRA2A-211ENST00000538367 RABEP1Q15276 862 aa21.97■■□□□ 1.11
TRA2A-211ENST00000538367 GAS2L2Q8NHY3 880 aa21.97■■□□□ 1.11
TRA2A-211ENST00000538367 CFAP53Q96M91 514 aa21.97■■□□□ 1.11
TRA2A-211ENST00000538367 IL16Q14005 1332 aa21.97■■□□□ 1.11
TRA2A-211ENST00000538367 CFAP65Q6ZU64 1925 aaKnown RBP21.97■■□□□ 1.11
TRA2A-211ENST00000538367 KIF20AO95235 890 aa21.97■■□□□ 1.11
TRA2A-211ENST00000538367 MYRIPQ8NFW9 859 aa21.97■■□□□ 1.11
TRA2A-211ENST00000538367 CHMP4BQ9H444 224 aaKnown RBP21.97■■□□□ 1.11
TRA2A-211ENST00000538367 ITPRIPQ8IWB1 547 aa21.96■■□□□ 1.11
TRA2A-211ENST00000538367 SMC4Q9NTJ3 1288 aa21.96■■□□□ 1.11
TRA2A-211ENST00000538367 NPATQ14207 1427 aa21.96■■□□□ 1.11
TRA2A-211ENST00000538367 GTF2F1P35269 517 aaKnown RBP eCLIP21.95■■□□□ 1.117e-10■□□□□ 10.7
TRA2A-211ENST00000538367 HMGN5P82970 282 aaKnown RBP21.95■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms