RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 ROCK2O75116 1388 aaKnown RBP10.38□□□□□ -0.75
CPSF7-216ENST00000536548 PLCH1Q4KWH8 1693 aa10.38□□□□□ -0.75
CPSF7-216ENST00000536548 KIF7Q2M1P5 1343 aa10.37□□□□□ -0.75
CPSF7-216ENST00000536548 CCDC184Q52MB2 194 aa10.37□□□□□ -0.75
CPSF7-216ENST00000536548 SPATA31E1Q6ZUB1 1445 aa10.37□□□□□ -0.75
CPSF7-216ENST00000536548 CABLES1Q8TDN4 633 aa10.37□□□□□ -0.75
CPSF7-216ENST00000536548 E9PCH4 1651 aa10.37□□□□□ -0.75
CPSF7-216ENST00000536548 ANKRD30BQ9BXX2 1392 aa10.37□□□□□ -0.75
CPSF7-216ENST00000536548 DISP2A7MBM2 1401 aa10.36□□□□□ -0.75
CPSF7-216ENST00000536548 ROBO2Q9HCK4 1378 aa10.36□□□□□ -0.75
CPSF7-216ENST00000536548 SPON1Q9HCB6 807 aa10.35□□□□□ -0.75
CPSF7-216ENST00000536548 USP35Q9P2H5 1018 aa10.35□□□□□ -0.75
CPSF7-216ENST00000536548 KTN1Q86UP2 1357 aaKnown RBP10.35□□□□□ -0.75
CPSF7-216ENST00000536548 ANKRD30AQ9BXX3 1397 aa10.35□□□□□ -0.75
CPSF7-216ENST00000536548 NINLQ9Y2I6 1382 aa10.35□□□□□ -0.75
CPSF7-216ENST00000536548 NWD2Q9ULI1 1742 aa10.35□□□□□ -0.75
CPSF7-216ENST00000536548 NUTM2FA1L443 756 aa10.34□□□□□ -0.75
CPSF7-216ENST00000536548 TCERG1O14776 1098 aaKnown RBP10.34□□□□□ -0.75
CPSF7-216ENST00000536548 KCNQ2O43526 872 aa10.34□□□□□ -0.75
CPSF7-216ENST00000536548 TRIM37O94972 964 aa10.34□□□□□ -0.75
CPSF7-216ENST00000536548 NBR1Q14596 966 aa10.34□□□□□ -0.75
CPSF7-216ENST00000536548 ADGRL2O95490 1459 aa10.34□□□□□ -0.75
CPSF7-216ENST00000536548 NUP188Q5SRE5 1749 aa10.33□□□□□ -0.76
CPSF7-216ENST00000536548 C11orf95C9JLR9 678 aaPredicted RBP10.33□□□□□ -0.76
CPSF7-216ENST00000536548 PAK3O75914 559 aaPredicted RBP10.33□□□□□ -0.76
CPSF7-216ENST00000536548 CHD4Q14839 1912 aa10.33□□□□□ -0.76
CPSF7-216ENST00000536548 SPATA31A3Q5VYP0 1347 aa10.33□□□□□ -0.76
CPSF7-216ENST00000536548 RREB1Q92766 1687 aa10.32□□□□□ -0.76
CPSF7-216ENST00000536548 APBA3O96018 575 aa10.32□□□□□ -0.76
CPSF7-216ENST00000536548 HAP1P54257 671 aaPredicted RBP10.32□□□□□ -0.76
CPSF7-216ENST00000536548 ZNF326Q5BKZ1 582 aaKnown RBP10.32□□□□□ -0.76
CPSF7-216ENST00000536548 IQGAP3Q86VI3 1631 aa10.32□□□□□ -0.76
CPSF7-216ENST00000536548 FAM83GA6ND36 823 aa10.31□□□□□ -0.76
CPSF7-216ENST00000536548 PPM1GO15355 546 aaPredicted RBP10.31□□□□□ -0.76
CPSF7-216ENST00000536548 MS4A1P11836 297 aa10.31□□□□□ -0.76
CPSF7-216ENST00000536548 NRAPQ86VF7 1730 aa10.3□□□□□ -0.76
CPSF7-216ENST00000536548 NBPF8Q3BBV2 869 aa10.3□□□□□ -0.76
CPSF7-216ENST00000536548 ANKRD50Q9ULJ7 1429 aa10.29□□□□□ -0.76
CPSF7-216ENST00000536548 ABCA3Q99758 1704 aa10.29□□□□□ -0.76
CPSF7-216ENST00000536548 BRD4O60885 1362 aaPredicted RBP10.28□□□□□ -0.76
CPSF7-216ENST00000536548 LRPPRCP42704 1394 aaKnown RBP10.28□□□□□ -0.76
CPSF7-216ENST00000536548 ADGRB2O60241 1585 aa10.28□□□□□ -0.76
CPSF7-216ENST00000536548 NRKQ7Z2Y5 1582 aa10.28□□□□□ -0.76
CPSF7-216ENST00000536548 PDE3BQ13370 1112 aa10.28□□□□□ -0.76
CPSF7-216ENST00000536548 NBPF14Q5TI25 921 aa10.28□□□□□ -0.76
CPSF7-216ENST00000536548 KRT28Q7Z3Y7 464 aa10.28□□□□□ -0.76
CPSF7-216ENST00000536548 TMC1Q8TDI8 760 aa10.28□□□□□ -0.76
CPSF7-216ENST00000536548 DDRGK1Q96HY6 314 aa10.28□□□□□ -0.76
CPSF7-216ENST00000536548 SLC4A1APQ9BWU0 796 aaKnown RBP10.28□□□□□ -0.76
CPSF7-216ENST00000536548 PDGFDQ9GZP0 370 aaPredicted RBP10.28□□□□□ -0.76
CPSF7-216ENST00000536548 BTG4Q9NY30 223 aa10.28□□□□□ -0.76
CPSF7-216ENST00000536548 USP47Q96K76 1375 aa10.27□□□□□ -0.76
CPSF7-216ENST00000536548 GIGYF1O75420 1035 aaPredicted RBP10.27□□□□□ -0.77
CPSF7-216ENST00000536548 RALBP1Q15311 655 aa10.27□□□□□ -0.77
CPSF7-216ENST00000536548 MYOM1P52179 1685 aa10.27□□□□□ -0.77
CPSF7-216ENST00000536548 THSD7AQ9UPZ6 1657 aa10.27□□□□□ -0.77
CPSF7-216ENST00000536548 PARD3Q8TEW0 1356 aa10.26□□□□□ -0.77
CPSF7-216ENST00000536548 CDC42BPGQ6DT37 1551 aa10.26□□□□□ -0.77
CPSF7-216ENST00000536548 RRP1P56182 461 aaKnown RBP10.26□□□□□ -0.77
CPSF7-216ENST00000536548 LMOD2Q6P5Q4 547 aa10.26□□□□□ -0.77
CPSF7-216ENST00000536548 PNISRQ8TF01 805 aaKnown RBP10.26□□□□□ -0.77
CPSF7-216ENST00000536548 NEXMIFQ5QGS0 1516 aa10.26□□□□□ -0.77
CPSF7-216ENST00000536548 FAM196AQ6ZSG2 479 aa10.25□□□□□ -0.77
CPSF7-216ENST00000536548 MYBBP1AQ9BQG0 1328 aaKnown RBP10.25□□□□□ -0.77
CPSF7-216ENST00000536548 INSRP06213 1382 aa10.25□□□□□ -0.77
CPSF7-216ENST00000536548 PCNTO95613 3336 aa10.25□□□□□ -0.77
CPSF7-216ENST00000536548 RGPD8O14715 1765 aaPredicted RBP10.24□□□□□ -0.77
CPSF7-216ENST00000536548 ZBTB7AO95365 584 aa10.24□□□□□ -0.77
CPSF7-216ENST00000536548 SYT17Q9BSW7 474 aa10.24□□□□□ -0.77
CPSF7-216ENST00000536548 SPATA31A5Q5VU36 1347 aa10.24□□□□□ -0.77
CPSF7-216ENST00000536548 SPATA31A7Q8IWB4 1347 aa10.24□□□□□ -0.77
CPSF7-216ENST00000536548 CCDC144AA2RUR9 1427 aa10.24□□□□□ -0.77
CPSF7-216ENST00000536548 TNS3Q68CZ2 1445 aa10.24□□□□□ -0.77
CPSF7-216ENST00000536548 PRKCSHP14314 528 aaPredicted RBP10.23□□□□□ -0.77
CPSF7-216ENST00000536548 PTGER2P43116 358 aa10.23□□□□□ -0.77
CPSF7-216ENST00000536548 FHDC1Q9C0D6 1143 aaPredicted RBP10.23□□□□□ -0.77
CPSF7-216ENST00000536548 CASZ1Q86V15 1759 aa10.23□□□□□ -0.77
CPSF7-216ENST00000536548 PDE4AP27815 886 aa10.22□□□□□ -0.77
CPSF7-216ENST00000536548 WAPLQ7Z5K2 1190 aa10.22□□□□□ -0.77
CPSF7-216ENST00000536548 RCAN3Q9UKA8 241 aa10.22□□□□□ -0.77
CPSF7-216ENST00000536548 ATF5Q9Y2D1 282 aaPredicted RBP10.22□□□□□ -0.77
CPSF7-216ENST00000536548 NEFMP07197 916 aa10.21□□□□□ -0.77
CPSF7-216ENST00000536548 BACH2Q9BYV9 841 aa10.21□□□□□ -0.77
CPSF7-216ENST00000536548 ANO8Q9HCE9 1232 aaPredicted RBP10.21□□□□□ -0.77
CPSF7-216ENST00000536548 PRAG1Q86YV5 1406 aa10.21□□□□□ -0.78
CPSF7-216ENST00000536548 KIF1AQ12756 1690 aa10.21□□□□□ -0.78
CPSF7-216ENST00000536548 COL14A1Q05707 1796 aaKnown RBP10.2□□□□□ -0.78
CPSF7-216ENST00000536548 FMN2Q9NZ56 1722 aa10.2□□□□□ -0.78
CPSF7-216ENST00000536548 CLTCL1P53675 1640 aa10.19□□□□□ -0.78
CPSF7-216ENST00000536548 NPM2Q86SE8 214 aaKnown RBP10.19□□□□□ -0.78
CPSF7-216ENST00000536548 POLR3GLQ9BT43 218 aa10.19□□□□□ -0.78
CPSF7-216ENST00000536548 SHANK3Q9BYB0 1731 aa10.19□□□□□ -0.78
CPSF7-216ENST00000536548 NUP155O75694 1391 aa10.18□□□□□ -0.78
CPSF7-216ENST00000536548 PLEKHH1Q9ULM0 1364 aa10.18□□□□□ -0.78
CPSF7-216ENST00000536548 PSME1Q06323 249 aa10.18□□□□□ -0.78
CPSF7-216ENST00000536548 NLRP13Q86W25 1043 aa10.18□□□□□ -0.78
CPSF7-216ENST00000536548 STK26Q9P289 416 aa10.18□□□□□ -0.78
CPSF7-216ENST00000536548 SPATA31A1Q5TZJ5 1347 aa10.17□□□□□ -0.78
CPSF7-216ENST00000536548 CAPN15O75808 1086 aa10.17□□□□□ -0.78
CPSF7-216ENST00000536548 EXOC6Q8TAG9 804 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms