RNA–Protein interactions for RNA: ENST00000535147.5

DDB1-204, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,789 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-204ENST00000535147 USP32Q8NFA0 1604 aa12.99□□□□□ -0.33
DDB1-204ENST00000535147 RPGRIP1LQ68CZ1 1315 aa12.99□□□□□ -0.33
DDB1-204ENST00000535147 GLI2P10070 1586 aa12.98□□□□□ -0.33
DDB1-204ENST00000535147 VGFO15240 615 aaPredicted RBP12.98□□□□□ -0.33
DDB1-204ENST00000535147 FAM43AQ8N2R8 423 aa12.98□□□□□ -0.33
DDB1-204ENST00000535147 DDX19BQ9UMR2 479 aa12.98□□□□□ -0.33
DDB1-204ENST00000535147 RIPK4P57078 832 aa12.98□□□□□ -0.33
DDB1-204ENST00000535147 ADGRB2O60241 1585 aa12.97□□□□□ -0.33
DDB1-204ENST00000535147 NSD2O96028 1365 aa12.97□□□□□ -0.33
DDB1-204ENST00000535147 HDAC1Q13547 482 aaPredicted RBP12.97□□□□□ -0.33
DDB1-204ENST00000535147 MCM4P33991 863 aa12.97□□□□□ -0.33
DDB1-204ENST00000535147 MINK1Q8N4C8 1332 aaPredicted RBP12.96□□□□□ -0.33
DDB1-204ENST00000535147 FRMPD1Q5SYB0 1578 aa12.96□□□□□ -0.33
DDB1-204ENST00000535147 FYB1O15117 783 aa12.96□□□□□ -0.33
DDB1-204ENST00000535147 CT47B1P0C2W7 299 aaPredicted RBP12.96□□□□□ -0.33
DDB1-204ENST00000535147 SMC5Q8IY18 1101 aa12.95□□□□□ -0.34
DDB1-204ENST00000535147 LNPKQ9C0E8 428 aa12.95□□□□□ -0.34
DDB1-204ENST00000535147 ZBTB40Q9NUA8 1239 aa12.95□□□□□ -0.34
DDB1-204ENST00000535147 ABCC11Q96J66 1382 aa12.95□□□□□ -0.34
DDB1-204ENST00000535147 FBLN1P23142 703 aa12.95□□□□□ -0.34
DDB1-204ENST00000535147 IDI1Q13907 227 aa12.95□□□□□ -0.34
DDB1-204ENST00000535147 PUS7Q96PZ0 661 aaKnown RBP12.95□□□□□ -0.34
DDB1-204ENST00000535147 ARHGEF28Q8N1W1 1705 aaKnown RBP12.95□□□□□ -0.34
DDB1-204ENST00000535147 RAPGEF3O95398 923 aa12.94□□□□□ -0.34
DDB1-204ENST00000535147 XRCC6P12956 609 aaKnown RBP eCLIP12.94□□□□□ -0.34
DDB1-204ENST00000535147 L1TD1Q5T7N2 865 aaKnown RBP12.94□□□□□ -0.34
DDB1-204ENST00000535147 RRAGDQ9NQL2 400 aaPredicted RBP12.94□□□□□ -0.34
DDB1-204ENST00000535147 ABCC3O15438 1527 aa12.93□□□□□ -0.34
DDB1-204ENST00000535147 PANK2Q9BZ23 570 aa12.93□□□□□ -0.34
DDB1-204ENST00000535147 CHMP5Q9NZZ3 219 aa12.93□□□□□ -0.34
DDB1-204ENST00000535147 CAMSAP1Q5T5Y3 1602 aa12.93□□□□□ -0.34
DDB1-204ENST00000535147 POGZQ7Z3K3 1410 aa12.93□□□□□ -0.34
DDB1-204ENST00000535147 COL3A1P02461 1466 aaPredicted RBP12.93□□□□□ -0.34
DDB1-204ENST00000535147 PRAM1Q96QH2 718 aa12.92□□□□□ -0.34
DDB1-204ENST00000535147 DIAPH1O60610 1272 aaKnown RBP12.92□□□□□ -0.34
DDB1-204ENST00000535147 SIGLEC1Q9BZZ2 1709 aa12.92□□□□□ -0.34
DDB1-204ENST00000535147 GOLGA6L3A6NEY3 463 aa12.92□□□□□ -0.34
DDB1-204ENST00000535147 TRAK2O60296 914 aa12.92□□□□□ -0.34
DDB1-204ENST00000535147 HSCBQ8IWL3 235 aa12.92□□□□□ -0.34
DDB1-204ENST00000535147 NEXMIFQ5QGS0 1516 aa12.91□□□□□ -0.34
DDB1-204ENST00000535147 HECW2Q9P2P5 1572 aa12.91□□□□□ -0.34
DDB1-204ENST00000535147 NPM1P06748 294 aaKnown RBP eCLIP12.91□□□□□ -0.34
DDB1-204ENST00000535147 NUCB1Q02818 461 aa12.91□□□□□ -0.34
DDB1-204ENST00000535147 THUMPD2Q9BTF0 503 aaKnown RBP12.91□□□□□ -0.34
DDB1-204ENST00000535147 C1orf115Q9H7X2 142 aa12.91□□□□□ -0.34
DDB1-204ENST00000535147 TERF2IPQ9NYB0 399 aa12.91□□□□□ -0.34
DDB1-204ENST00000535147 KIF16BQ96L93 1317 aa12.91□□□□□ -0.34
DDB1-204ENST00000535147 MLH3Q9UHC1 1453 aa12.9□□□□□ -0.34
DDB1-204ENST00000535147 IPO8O15397 1037 aaKnown RBP12.9□□□□□ -0.34
DDB1-204ENST00000535147 IL16Q14005 1332 aa12.9□□□□□ -0.34
DDB1-204ENST00000535147 FSD2A1L4K1 749 aa12.9□□□□□ -0.34
DDB1-204ENST00000535147 ZNF692Q9BU19 519 aaPredicted RBP12.9□□□□□ -0.34
DDB1-204ENST00000535147 PRKAR2BP31323 418 aa12.89□□□□□ -0.35
DDB1-204ENST00000535147 CHD1LQ86WJ1 897 aa12.89□□□□□ -0.35
DDB1-204ENST00000535147 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.89□□□□□ -0.35
DDB1-204ENST00000535147 ELL2O00472 640 aaPredicted RBP12.89□□□□□ -0.35
DDB1-204ENST00000535147 CABP1Q9NZU7 370 aa12.89□□□□□ -0.35
DDB1-204ENST00000535147 CD163L1Q9NR16 1453 aa12.88□□□□□ -0.35
DDB1-204ENST00000535147 HMOX1P09601 288 aa12.88□□□□□ -0.35
DDB1-204ENST00000535147 ANKRD45Q5TZF3 282 aa12.88□□□□□ -0.35
DDB1-204ENST00000535147 TSPYL6Q8N831 410 aa12.87□□□□□ -0.35
DDB1-204ENST00000535147 PHACTR3Q96KR7 559 aa12.87□□□□□ -0.35
DDB1-204ENST00000535147 ATAD2Q6PL18 1390 aa12.87□□□□□ -0.35
DDB1-204ENST00000535147 RBM25P49756 843 aaKnown RBP12.87□□□□□ -0.35
DDB1-204ENST00000535147 CDK19Q9BWU1 502 aa12.87□□□□□ -0.35
DDB1-204ENST00000535147 FOXD4L1Q9NU39 408 aa12.87□□□□□ -0.35
DDB1-204ENST00000535147 HDGFL2Q7Z4V5 671 aaPredicted RBP12.86□□□□□ -0.35
DDB1-204ENST00000535147 ALDH1L2Q3SY69 923 aa12.86□□□□□ -0.35
DDB1-204ENST00000535147 RSPH6AQ9H0K4 717 aa12.86□□□□□ -0.35
DDB1-204ENST00000535147 PTPRMP28827 1452 aa12.86□□□□□ -0.35
DDB1-204ENST00000535147 PIK3C2BO00750 1634 aa12.86□□□□□ -0.35
DDB1-204ENST00000535147 ZBTB7BO15156 539 aaPredicted RBP12.86□□□□□ -0.35
DDB1-204ENST00000535147 FCHSD2O94868 740 aa12.86□□□□□ -0.35
DDB1-204ENST00000535147 CD2BP2O95400 341 aaKnown RBP12.86□□□□□ -0.35
DDB1-204ENST00000535147 DDIT3P35638 169 aa12.85□□□□□ -0.35
DDB1-204ENST00000535147 PNPLA6Q8IY17 1366 aa12.85□□□□□ -0.35
DDB1-204ENST00000535147 PPIP5K1Q6PFW1 1433 aa12.85□□□□□ -0.35
DDB1-204ENST00000535147 HSP90AB1P08238 724 aaKnown RBP12.85□□□□□ -0.35
DDB1-204ENST00000535147 TNPO1Q92973 898 aaKnown RBP12.85□□□□□ -0.35
DDB1-204ENST00000535147 KIF2CQ99661 725 aa12.85□□□□□ -0.35
DDB1-204ENST00000535147 RBM42Q9BTD8 480 aaKnown RBP12.85□□□□□ -0.35
DDB1-204ENST00000535147 POLKQ9UBT6 870 aa12.85□□□□□ -0.35
DDB1-204ENST00000535147 VAMP4O75379 141 aa12.84□□□□□ -0.35
DDB1-204ENST00000535147 BMP2KLQ5H9B9 411 aa12.84□□□□□ -0.35
DDB1-204ENST00000535147 LRRC7Q96NW7 1537 aa12.84□□□□□ -0.35
DDB1-204ENST00000535147 YTHDC2Q9H6S0 1430 aaKnown RBP12.84□□□□□ -0.35
DDB1-204ENST00000535147 PNNQ9H307 717 aaKnown RBP12.84□□□□□ -0.35
DDB1-204ENST00000535147 NCOA3Q9Y6Q9 1424 aa12.83□□□□□ -0.35
DDB1-204ENST00000535147 FBXO31Q5XUX0 539 aaPredicted RBP12.83□□□□□ -0.36
DDB1-204ENST00000535147 SIRT2Q8IXJ6 389 aa12.83□□□□□ -0.36
DDB1-204ENST00000535147 SNX21Q969T3 373 aa12.83□□□□□ -0.36
DDB1-204ENST00000535147 SLC52A1Q9NWF4 448 aa12.83□□□□□ -0.36
DDB1-204ENST00000535147 DDX11L8A8MPP1 907 aa12.83□□□□□ -0.36
DDB1-204ENST00000535147 MRPL50Q8N5N7 158 aaKnown RBP12.83□□□□□ -0.36
DDB1-204ENST00000535147 TBC1D9Q6ZT07 1266 aa12.82□□□□□ -0.36
DDB1-204ENST00000535147 WAPLQ7Z5K2 1190 aa12.82□□□□□ -0.36
DDB1-204ENST00000535147 EMILIN1Q9Y6C2 1016 aa12.82□□□□□ -0.36
DDB1-204ENST00000535147 MYO5BQ9ULV0 1848 aa12.82□□□□□ -0.36
DDB1-204ENST00000535147 HSP90AA1P07900 732 aaKnown RBP12.82□□□□□ -0.36
DDB1-204ENST00000535147 MED14O60244 1454 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms