RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 RICTORQ6R327 1708 aa20.44■□□□□ 0.86
ATP2C1-224ENST00000533801 WASLO00401 505 aaPredicted RBP20.43■□□□□ 0.86
ATP2C1-224ENST00000533801 DCTN1Q14203 1278 aa20.43■□□□□ 0.86
ATP2C1-224ENST00000533801 COG3Q96JB2 828 aa20.43■□□□□ 0.86
ATP2C1-224ENST00000533801 SETBP1Q9Y6X0 1596 aa20.42■□□□□ 0.86
ATP2C1-224ENST00000533801 ARHGAP31Q2M1Z3 1444 aa20.41■□□□□ 0.86
ATP2C1-224ENST00000533801 PHACTR3Q96KR7 559 aa20.41■□□□□ 0.86
ATP2C1-224ENST00000533801 POLKQ9UBT6 870 aa20.41■□□□□ 0.86
ATP2C1-224ENST00000533801 WDR63Q8IWG1 891 aa20.4■□□□□ 0.86
ATP2C1-224ENST00000533801 INSRP06213 1382 aa20.4■□□□□ 0.86
ATP2C1-224ENST00000533801 MS4A1P11836 297 aa20.4■□□□□ 0.86
ATP2C1-224ENST00000533801 HDGFP51858 240 aaKnown RBP20.39■□□□□ 0.86
ATP2C1-224ENST00000533801 SSH1Q8WYL5 1049 aa20.39■□□□□ 0.86
ATP2C1-224ENST00000533801 PCDHB15Q9Y5E8 787 aa20.39■□□□□ 0.86
ATP2C1-224ENST00000533801 ABCC11Q96J66 1382 aa20.39■□□□□ 0.86
ATP2C1-224ENST00000533801 FAM83GA6ND36 823 aa20.39■□□□□ 0.85
ATP2C1-224ENST00000533801 KDM2BQ8NHM5 1336 aa20.39■□□□□ 0.85
ATP2C1-224ENST00000533801 ZKSCAN2Q63HK3 967 aa20.39■□□□□ 0.85
ATP2C1-224ENST00000533801 NOB1Q9ULX3 412 aaKnown RBP20.38■□□□□ 0.85
ATP2C1-224ENST00000533801 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.38■□□□□ 0.85
ATP2C1-224ENST00000533801 TRIM35Q9UPQ4 493 aa20.38■□□□□ 0.85
ATP2C1-224ENST00000533801 FAM161AQ3B820 660 aa20.37■□□□□ 0.85
ATP2C1-224ENST00000533801 DZIP1LQ8IYY4 767 aaKnown RBP20.37■□□□□ 0.85
ATP2C1-224ENST00000533801 LTKP29376 864 aa20.37■□□□□ 0.85
ATP2C1-224ENST00000533801 CCDC61Q9Y6R9 512 aa20.37■□□□□ 0.85
ATP2C1-224ENST00000533801 PREX1Q8TCU6 1659 aa20.36■□□□□ 0.85
ATP2C1-224ENST00000533801 PDE3AQ14432 1141 aa20.36■□□□□ 0.85
ATP2C1-224ENST00000533801 PTPRMP28827 1452 aa20.36■□□□□ 0.85
ATP2C1-224ENST00000533801 CLTCQ00610 1675 aaKnown RBP20.36■□□□□ 0.85
ATP2C1-224ENST00000533801 PPIP5K1Q6PFW1 1433 aa20.36■□□□□ 0.85
ATP2C1-224ENST00000533801 NGEFQ8N5V2 710 aa20.35■□□□□ 0.85
ATP2C1-224ENST00000533801 DIP2BQ9P265 1576 aa20.35■□□□□ 0.85
ATP2C1-224ENST00000533801 ARHGEF28Q8N1W1 1705 aaKnown RBP20.35■□□□□ 0.85
ATP2C1-224ENST00000533801 NGDNQ8NEJ9 315 aaKnown RBP20.35■□□□□ 0.85
ATP2C1-224ENST00000533801 LTV1Q96GA3 475 aaPredicted RBP20.35■□□□□ 0.85
ATP2C1-224ENST00000533801 ALKQ9UM73 1620 aa20.35■□□□□ 0.85
ATP2C1-224ENST00000533801 EID1Q9Y6B2 187 aa20.34■□□□□ 0.85
ATP2C1-224ENST00000533801 C1orf115Q9H7X2 142 aa20.34■□□□□ 0.85
ATP2C1-224ENST00000533801 A2ML1A8K2U0 1454 aa20.34■□□□□ 0.85
ATP2C1-224ENST00000533801 TNRQ92752 1358 aa20.34■□□□□ 0.85
ATP2C1-224ENST00000533801 NSD2O96028 1365 aa20.33■□□□□ 0.85
ATP2C1-224ENST00000533801 AEBP1Q8IUX7 1158 aa20.33■□□□□ 0.85
ATP2C1-224ENST00000533801 ZC3H13Q5T200 1668 aaKnown RBP20.33■□□□□ 0.84
ATP2C1-224ENST00000533801 NEURL4Q96JN8 1562 aa20.33■□□□□ 0.84
ATP2C1-224ENST00000533801 TMEM131LA2VDJ0 1609 aa20.32■□□□□ 0.84
ATP2C1-224ENST00000533801 TRIM27P14373 513 aa20.32■□□□□ 0.84
ATP2C1-224ENST00000533801 PLEKHF1Q96S99 279 aa20.32■□□□□ 0.84
ATP2C1-224ENST00000533801 SPRYD3Q8NCJ5 442 aa20.31■□□□□ 0.84
ATP2C1-224ENST00000533801 SULT6B1Q6IMI4 303 aa20.31■□□□□ 0.84
ATP2C1-224ENST00000533801 PDZRN3Q9UPQ7 1066 aa20.31■□□□□ 0.84
ATP2C1-224ENST00000533801 PUS7Q96PZ0 661 aaKnown RBP20.3■□□□□ 0.84
ATP2C1-224ENST00000533801 MYO3AQ8NEV4 1616 aa20.3■□□□□ 0.84
ATP2C1-224ENST00000533801 TMEM57Q8N5G2 664 aa20.3■□□□□ 0.84
ATP2C1-224ENST00000533801 C8orf34Q49A92 452 aa20.29■□□□□ 0.84
ATP2C1-224ENST00000533801 TSPYL6Q8N831 410 aa20.29■□□□□ 0.84
ATP2C1-224ENST00000533801 PNNQ9H307 717 aaKnown RBP20.29■□□□□ 0.84
ATP2C1-224ENST00000533801 DEKP35659 375 aaKnown RBP20.28■□□□□ 0.84
ATP2C1-224ENST00000533801 MVPQ14764 893 aaKnown RBP20.28■□□□□ 0.84
ATP2C1-224ENST00000533801 LMOD2Q6P5Q4 547 aa20.28■□□□□ 0.84
ATP2C1-224ENST00000533801 RWDD1Q9H446 243 aaPredicted RBP20.28■□□□□ 0.84
ATP2C1-224ENST00000533801 MIS18AQ9NYP9 233 aa20.28■□□□□ 0.84
ATP2C1-224ENST00000533801 AMOTL2Q9Y2J4 779 aa20.28■□□□□ 0.84
ATP2C1-224ENST00000533801 ACEP12821 1306 aa20.28■□□□□ 0.84
ATP2C1-224ENST00000533801 ZFYVE9O95405 1425 aa20.28■□□□□ 0.84
ATP2C1-224ENST00000533801 APBB1O00213 710 aa20.28■□□□□ 0.84
ATP2C1-224ENST00000533801 FCHSD2O94868 740 aa20.28■□□□□ 0.84
ATP2C1-224ENST00000533801 SEC24BO95487 1268 aa20.28■□□□□ 0.84
ATP2C1-224ENST00000533801 PRR36Q9H6K5 1346 aa20.27■□□□□ 0.84
ATP2C1-224ENST00000533801 HSP90AB2PQ58FF8 381 aa20.27■□□□□ 0.84
ATP2C1-224ENST00000533801 KRT24Q2M2I5 525 aa20.26■□□□□ 0.83
ATP2C1-224ENST00000533801 RSPH6AQ9H0K4 717 aa20.26■□□□□ 0.83
ATP2C1-224ENST00000533801 PPP6R1Q9UPN7 881 aa20.26■□□□□ 0.83
ATP2C1-224ENST00000533801 MCM10Q7L590 875 aa20.26■□□□□ 0.83
ATP2C1-224ENST00000533801 NINLQ9Y2I6 1382 aa20.26■□□□□ 0.83
ATP2C1-224ENST00000533801 ATF7IPQ6VMQ6 1270 aa20.26■□□□□ 0.83
ATP2C1-224ENST00000533801 CCDC27Q2M243 656 aa20.25■□□□□ 0.83
ATP2C1-224ENST00000533801 ROBO2Q9HCK4 1378 aa20.25■□□□□ 0.83
ATP2C1-224ENST00000533801 NECTIN2Q92692 538 aa20.24■□□□□ 0.83
ATP2C1-224ENST00000533801 DDRGK1Q96HY6 314 aa20.24■□□□□ 0.83
ATP2C1-224ENST00000533801 CD163L1Q9NR16 1453 aa20.24■□□□□ 0.83
ATP2C1-224ENST00000533801 NFE2L2Q16236 605 aa20.24■□□□□ 0.83
ATP2C1-224ENST00000533801 SLKQ9H2G2 1235 aaPredicted RBP20.24■□□□□ 0.83
ATP2C1-224ENST00000533801 PHF23Q9BUL5 403 aaPredicted RBP20.23■□□□□ 0.83
ATP2C1-224ENST00000533801 AMPHP49418 695 aa20.23■□□□□ 0.83
ATP2C1-224ENST00000533801 LNPKQ9C0E8 428 aa20.23■□□□□ 0.83
ATP2C1-224ENST00000533801 ARHGEF40Q8TER5 1519 aa20.22■□□□□ 0.83
ATP2C1-224ENST00000533801 MFAP1P55081 439 aaKnown RBP20.21■□□□□ 0.83
ATP2C1-224ENST00000533801 SHPRHQ149N8 1683 aa20.21■□□□□ 0.83
ATP2C1-224ENST00000533801 IPO8O15397 1037 aaKnown RBP20.21■□□□□ 0.83
ATP2C1-224ENST00000533801 MBIPQ9NS73 344 aa20.21■□□□□ 0.83
ATP2C1-224ENST00000533801 TMEM2Q9UHN6 1383 aa20.2■□□□□ 0.82
ATP2C1-224ENST00000533801 IL13P35225 146 aa20.2■□□□□ 0.82
ATP2C1-224ENST00000533801 NLRP6P59044 892 aa20.2■□□□□ 0.82
ATP2C1-224ENST00000533801 TWISTNBQ3B726 338 aaPredicted RBP20.19■□□□□ 0.82
ATP2C1-224ENST00000533801 UPF2Q9HAU5 1272 aaKnown RBP20.19■□□□□ 0.82
ATP2C1-224ENST00000533801 DDX19BQ9UMR2 479 aa20.19■□□□□ 0.82
ATP2C1-224ENST00000533801 FOXO3O43524 673 aa20.18■□□□□ 0.82
ATP2C1-224ENST00000533801 C8orf58Q8NAV2 365 aa20.18■□□□□ 0.82
ATP2C1-224ENST00000533801 XPCQ01831 940 aaPredicted RBP20.18■□□□□ 0.82
ATP2C1-224ENST00000533801 TTC21BQ7Z4L5 1316 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms