RNA–Protein interactions for RNA: ENST00000533370.1

TGFBR3-211, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-211ENST00000533370 ATF3P18847 181 aa16.54■□□□□ 0.24
TGFBR3-211ENST00000533370 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.53■□□□□ 0.24
TGFBR3-211ENST00000533370 PMFBP1Q8TBY8 1022 aa16.53■□□□□ 0.24
TGFBR3-211ENST00000533370 PNISRQ8TF01 805 aaKnown RBP16.53■□□□□ 0.24
TGFBR3-211ENST00000533370 YTHDC1Q96MU7 727 aaKnown RBP16.53■□□□□ 0.24
TGFBR3-211ENST00000533370 PHF8Q9UPP1 1060 aa16.53■□□□□ 0.24
TGFBR3-211ENST00000533370 GGNBP2Q9H3C7 697 aa16.52■□□□□ 0.24
TGFBR3-211ENST00000533370 ZNF335Q9H4Z2 1342 aaPredicted RBP16.51■□□□□ 0.23
TGFBR3-211ENST00000533370 FMN2Q9NZ56 1722 aa16.51■□□□□ 0.23
TGFBR3-211ENST00000533370 ESCO1Q5FWF5 840 aa16.51■□□□□ 0.23
TGFBR3-211ENST00000533370 CADPS2Q86UW7 1296 aa16.51■□□□□ 0.23
TGFBR3-211ENST00000533370 NALCNQ8IZF0 1738 aa16.5■□□□□ 0.23
TGFBR3-211ENST00000533370 TTC21BQ7Z4L5 1316 aa16.5■□□□□ 0.23
TGFBR3-211ENST00000533370 FAM9BQ8IZU0 186 aa16.5■□□□□ 0.23
TGFBR3-211ENST00000533370 ZNF219Q9P2Y4 722 aaPredicted RBP16.5■□□□□ 0.23
TGFBR3-211ENST00000533370 DCCP43146 1447 aa16.5■□□□□ 0.23
TGFBR3-211ENST00000533370 TOPAZ1Q8N9V7 1692 aa16.5■□□□□ 0.23
TGFBR3-211ENST00000533370 TTC21AQ8NDW8 1320 aa16.49■□□□□ 0.23
TGFBR3-211ENST00000533370 USP6P35125 1406 aa16.49■□□□□ 0.23
TGFBR3-211ENST00000533370 MSH6P52701 1360 aa16.49■□□□□ 0.23
TGFBR3-211ENST00000533370 STRCP1A6NGW2 1772 aa16.48■□□□□ 0.23
TGFBR3-211ENST00000533370 SSH2Q76I76 1423 aa16.47■□□□□ 0.23
TGFBR3-211ENST00000533370 LRRC7Q96NW7 1537 aa16.47■□□□□ 0.23
TGFBR3-211ENST00000533370 TNNT2P45379 298 aaPredicted RBP16.47■□□□□ 0.23
TGFBR3-211ENST00000533370 NME9Q86XW9 330 aa16.47■□□□□ 0.23
TGFBR3-211ENST00000533370 COG3Q96JB2 828 aa16.47■□□□□ 0.23
TGFBR3-211ENST00000533370 ITSN1Q15811 1721 aa16.47■□□□□ 0.23
TGFBR3-211ENST00000533370 PSME1Q06323 249 aa16.46■□□□□ 0.23
TGFBR3-211ENST00000533370 ORAI2Q96SN7 254 aa16.46■□□□□ 0.23
TGFBR3-211ENST00000533370 CENPBP07199 599 aaPredicted RBP16.45■□□□□ 0.22
TGFBR3-211ENST00000533370 C1orf167Q5SNV9 1468 aa16.45■□□□□ 0.22
TGFBR3-211ENST00000533370 AKAP12Q02952 1782 aa16.45■□□□□ 0.22
TGFBR3-211ENST00000533370 MTHFSP49914 203 aa16.44■□□□□ 0.22
TGFBR3-211ENST00000533370 CFAP53Q96M91 514 aa16.44■□□□□ 0.22
TGFBR3-211ENST00000533370 MON2Q7Z3U7 1717 aa16.43■□□□□ 0.22
TGFBR3-211ENST00000533370 FOXO3O43524 673 aa16.42■□□□□ 0.22
TGFBR3-211ENST00000533370 ZRANB1Q9UGI0 708 aa16.42■□□□□ 0.22
TGFBR3-211ENST00000533370 MST1RQ04912 1400 aa16.42■□□□□ 0.22
TGFBR3-211ENST00000533370 INSRP06213 1382 aa16.41■□□□□ 0.22
TGFBR3-211ENST00000533370 USP31Q70CQ4 1352 aa16.41■□□□□ 0.22
TGFBR3-211ENST00000533370 WDR43Q15061 677 aaKnown RBP eCLIP16.41■□□□□ 0.22
TGFBR3-211ENST00000533370 SLAIN2Q9P270 581 aa16.41■□□□□ 0.22
TGFBR3-211ENST00000533370 RGPD8O14715 1765 aaPredicted RBP16.41■□□□□ 0.22
TGFBR3-211ENST00000533370 AATKQ6ZMQ8 1374 aa16.4■□□□□ 0.22
TGFBR3-211ENST00000533370 PAK3O75914 559 aaPredicted RBP16.4■□□□□ 0.22
TGFBR3-211ENST00000533370 NLRP6P59044 892 aa16.39■□□□□ 0.21
TGFBR3-211ENST00000533370 KRT28Q7Z3Y7 464 aa16.39■□□□□ 0.21
TGFBR3-211ENST00000533370 ABTB2Q8N961 1025 aa16.39■□□□□ 0.21
TGFBR3-211ENST00000533370 POLKQ9UBT6 870 aa16.39■□□□□ 0.21
TGFBR3-211ENST00000533370 HNRNPUQ00839 825 aaKnown RBP eCLIP16.38■□□□□ 0.21
TGFBR3-211ENST00000533370 ADAMTS8Q9UP79 889 aa16.38■□□□□ 0.21
TGFBR3-211ENST00000533370 KIF20BQ96Q89 1820 aa16.38■□□□□ 0.21
TGFBR3-211ENST00000533370 ANKRD26Q9UPS8 1709 aa16.37■□□□□ 0.21
TGFBR3-211ENST00000533370 NRKQ7Z2Y5 1582 aa16.37■□□□□ 0.21
TGFBR3-211ENST00000533370 RTN4Q9NQC3 1192 aaKnown RBP16.36■□□□□ 0.21
TGFBR3-211ENST00000533370 NUDCQ9Y266 331 aa16.36■□□□□ 0.21
TGFBR3-211ENST00000533370 PNPLA6Q8IY17 1366 aa16.36■□□□□ 0.21
TGFBR3-211ENST00000533370 OVOS2A0A0J9YW53 1432 aa16.36■□□□□ 0.21
TGFBR3-211ENST00000533370 OVOS2Q6IE36 1432 aa16.36■□□□□ 0.21
TGFBR3-211ENST00000533370 NPHP3Q7Z494 1330 aa16.35■□□□□ 0.21
TGFBR3-211ENST00000533370 XIRP1Q702N8 1843 aaKnown RBP16.34■□□□□ 0.21
TGFBR3-211ENST00000533370 FBLN1P23142 703 aa16.34■□□□□ 0.21
TGFBR3-211ENST00000533370 BRINP3Q76B58 766 aa16.34■□□□□ 0.21
TGFBR3-211ENST00000533370 KIF1AQ12756 1690 aa16.34■□□□□ 0.21
TGFBR3-211ENST00000533370 DIAPH1O60610 1272 aaKnown RBP16.33■□□□□ 0.2
TGFBR3-211ENST00000533370 PPM1GO15355 546 aaPredicted RBP16.32■□□□□ 0.2
TGFBR3-211ENST00000533370 XPCQ01831 940 aaPredicted RBP16.32■□□□□ 0.2
TGFBR3-211ENST00000533370 SBNO1A3KN83 1393 aa16.31■□□□□ 0.2
TGFBR3-211ENST00000533370 NUTM2GQ5VZR2 741 aa16.31■□□□□ 0.2
TGFBR3-211ENST00000533370 KCNH5Q8NCM2 988 aa16.31■□□□□ 0.2
TGFBR3-211ENST00000533370 EMILIN1Q9Y6C2 1016 aa16.31■□□□□ 0.2
TGFBR3-211ENST00000533370 LTBP4Q8N2S1 1624 aa16.3■□□□□ 0.2
TGFBR3-211ENST00000533370 SMG6Q86US8 1419 aaKnown RBP16.3■□□□□ 0.2
TGFBR3-211ENST00000533370 RRS1Q15050 365 aaKnown RBP16.3■□□□□ 0.2
TGFBR3-211ENST00000533370 ZBED9Q6R2W3 1325 aa16.29■□□□□ 0.2
TGFBR3-211ENST00000533370 BLMP54132 1417 aaPredicted RBP16.28■□□□□ 0.2
TGFBR3-211ENST00000533370 U2AF1L5P0DN76 240 aaPredicted RBP16.28■□□□□ 0.2
TGFBR3-211ENST00000533370 U2AF1Q01081 240 aaKnown RBP eCLIP16.28■□□□□ 0.2
TGFBR3-211ENST00000533370 LMOD2Q6P5Q4 547 aa16.28■□□□□ 0.2
TGFBR3-211ENST00000533370 RNF39Q9H2S5 420 aa16.28■□□□□ 0.2
TGFBR3-211ENST00000533370 PNNQ9H307 717 aaKnown RBP16.28■□□□□ 0.2
TGFBR3-211ENST00000533370 PIK3C2AO00443 1686 aa16.27■□□□□ 0.2
TGFBR3-211ENST00000533370 KIF24Q5T7B8 1368 aa16.27■□□□□ 0.2
TGFBR3-211ENST00000533370 MAP3K19Q56UN5 1328 aa16.27■□□□□ 0.2
TGFBR3-211ENST00000533370 U2SURPO15042 1029 aaKnown RBP16.27■□□□□ 0.2
TGFBR3-211ENST00000533370 IL13P35225 146 aa16.27■□□□□ 0.2
TGFBR3-211ENST00000533370 NGEFQ8N5V2 710 aa16.27■□□□□ 0.2
TGFBR3-211ENST00000533370 DDX17Q92841 729 aaKnown RBP16.27■□□□□ 0.2
TGFBR3-211ENST00000533370 SPATA31A3Q5VYP0 1347 aa16.26■□□□□ 0.19
TGFBR3-211ENST00000533370 SOX12O15370 315 aa16.26■□□□□ 0.19
TGFBR3-211ENST00000533370 GCP02774 474 aa16.26■□□□□ 0.19
TGFBR3-211ENST00000533370 AMPHP49418 695 aa16.26■□□□□ 0.19
TGFBR3-211ENST00000533370 RUNDC1Q96C34 613 aa16.26■□□□□ 0.19
TGFBR3-211ENST00000533370 COL3A1P02461 1466 aaPredicted RBP16.26■□□□□ 0.19
TGFBR3-211ENST00000533370 CDK12Q9NYV4 1490 aaPredicted RBP16.26■□□□□ 0.19
TGFBR3-211ENST00000533370 SOS2Q07890 1332 aaPredicted RBP16.25■□□□□ 0.19
TGFBR3-211ENST00000533370 FCHSD2O94868 740 aa16.25■□□□□ 0.19
TGFBR3-211ENST00000533370 USP54Q70EL1 1684 aa16.24■□□□□ 0.19
TGFBR3-211ENST00000533370 USP19O94966 1318 aa16.24■□□□□ 0.19
TGFBR3-211ENST00000533370 PXDNQ92626 1479 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms