RNA–Protein interactions for RNA: ENST00000533167.5

PMS2P3-208, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 3, humanhuman

TSL 1 (best)

Gene PMS2P3, Length 637 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P3-208ENST00000533167 CCER2I3L3R5 266 aa11.65□□□□□ -0.54
PMS2P3-208ENST00000533167 NME9Q86XW9 330 aa11.65□□□□□ -0.54
PMS2P3-208ENST00000533167 ZRANB1Q9UGI0 708 aa11.65□□□□□ -0.54
PMS2P3-208ENST00000533167 IQSEC2Q5JU85 1478 aa11.64□□□□□ -0.55
PMS2P3-208ENST00000533167 TTC21AQ8NDW8 1320 aa11.64□□□□□ -0.55
PMS2P3-208ENST00000533167 NGDNQ8NEJ9 315 aaKnown RBP11.64□□□□□ -0.55
PMS2P3-208ENST00000533167 GGNBP2Q9H3C7 697 aa11.64□□□□□ -0.55
PMS2P3-208ENST00000533167 PXDNQ92626 1479 aa11.63□□□□□ -0.55
PMS2P3-208ENST00000533167 KIF1AQ12756 1690 aa11.63□□□□□ -0.55
PMS2P3-208ENST00000533167 FOXO3O43524 673 aa11.63□□□□□ -0.55
PMS2P3-208ENST00000533167 PPP2R1AP30153 589 aa11.63□□□□□ -0.55
PMS2P3-208ENST00000533167 SOS2Q07890 1332 aaPredicted RBP11.62□□□□□ -0.55
PMS2P3-208ENST00000533167 MYBBP1AQ9BQG0 1328 aaKnown RBP11.62□□□□□ -0.55
PMS2P3-208ENST00000533167 SCAF1Q9H7N4 1312 aaKnown RBP11.62□□□□□ -0.55
PMS2P3-208ENST00000533167 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.62□□□□□ -0.559e-7■■□□□ 13.3
PMS2P3-208ENST00000533167 DDX17Q92841 729 aaKnown RBP11.62□□□□□ -0.55
PMS2P3-208ENST00000533167 SBNO1A3KN83 1393 aa11.62□□□□□ -0.55
PMS2P3-208ENST00000533167 TRPM3Q9HCF6 1732 aaPredicted RBP11.61□□□□□ -0.55
PMS2P3-208ENST00000533167 PIK3C2AO00443 1686 aa11.6□□□□□ -0.55
PMS2P3-208ENST00000533167 USP54Q70EL1 1684 aa11.6□□□□□ -0.55
PMS2P3-208ENST00000533167 AATKQ6ZMQ8 1374 aa11.6□□□□□ -0.55
PMS2P3-208ENST00000533167 KRT28Q7Z3Y7 464 aa11.6□□□□□ -0.55
PMS2P3-208ENST00000533167 NLRP13Q86W25 1043 aa11.6□□□□□ -0.55
PMS2P3-208ENST00000533167 SMG6Q86US8 1419 aaKnown RBP11.6□□□□□ -0.55
PMS2P3-208ENST00000533167 USP19O94966 1318 aa11.6□□□□□ -0.55
PMS2P3-208ENST00000533167 NPHP3Q7Z494 1330 aa11.6□□□□□ -0.55
PMS2P3-208ENST00000533167 XPCQ01831 940 aaPredicted RBP11.59□□□□□ -0.55
PMS2P3-208ENST00000533167 MORC1Q86VD1 984 aa11.59□□□□□ -0.55
PMS2P3-208ENST00000533167 CERKQ8TCT0 537 aa11.59□□□□□ -0.55
PMS2P3-208ENST00000533167 SPATA31A3Q5VYP0 1347 aa11.59□□□□□ -0.55
PMS2P3-208ENST00000533167 MARF1Q9Y4F3 1742 aaKnown RBP11.58□□□□□ -0.56
PMS2P3-208ENST00000533167 INSRP06213 1382 aa11.58□□□□□ -0.56
PMS2P3-208ENST00000533167 PSME1Q06323 249 aa11.58□□□□□ -0.56
PMS2P3-208ENST00000533167 CNGB1Q14028 1251 aaPredicted RBP11.58□□□□□ -0.56
PMS2P3-208ENST00000533167 AHDC1Q5TGY3 1603 aaPredicted RBP11.57□□□□□ -0.56
PMS2P3-208ENST00000533167 PNPLA6Q8IY17 1366 aa11.57□□□□□ -0.56
PMS2P3-208ENST00000533167 FBLN1P23142 703 aa11.57□□□□□ -0.56
PMS2P3-208ENST00000533167 POLKQ9UBT6 870 aa11.57□□□□□ -0.56
PMS2P3-208ENST00000533167 TNS3Q68CZ2 1445 aa11.57□□□□□ -0.56
PMS2P3-208ENST00000533167 ANKRD26Q9UPS8 1709 aa11.57□□□□□ -0.56
PMS2P3-208ENST00000533167 COL3A1P02461 1466 aaPredicted RBP11.57□□□□□ -0.56
PMS2P3-208ENST00000533167 NHSL1Q5SYE7 1610 aa11.57□□□□□ -0.56
PMS2P3-208ENST00000533167 SLIT3O75094 1523 aa11.56□□□□□ -0.56
PMS2P3-208ENST00000533167 ALS2Q96Q42 1657 aa11.56□□□□□ -0.56
PMS2P3-208ENST00000533167 KIF20BQ96Q89 1820 aa11.56□□□□□ -0.56
PMS2P3-208ENST00000533167 PNISRQ8TF01 805 aaKnown RBP11.56□□□□□ -0.56
PMS2P3-208ENST00000533167 COG3Q96JB2 828 aa11.56□□□□□ -0.56
PMS2P3-208ENST00000533167 ABTB2Q8N961 1025 aa11.55□□□□□ -0.56
PMS2P3-208ENST00000533167 NFAT5O94916 1531 aa11.55□□□□□ -0.56
PMS2P3-208ENST00000533167 MED1Q15648 1581 aaPredicted RBP11.54□□□□□ -0.56
PMS2P3-208ENST00000533167 TOM1O60784 492 aa11.54□□□□□ -0.56
PMS2P3-208ENST00000533167 MTHFSP49914 203 aa11.54□□□□□ -0.56
PMS2P3-208ENST00000533167 NLRP6P59044 892 aa11.54□□□□□ -0.56
PMS2P3-208ENST00000533167 ROBO1Q9Y6N7 1651 aa11.54□□□□□ -0.56
PMS2P3-208ENST00000533167 TNNT2P45379 298 aaPredicted RBP11.53□□□□□ -0.56
PMS2P3-208ENST00000533167 NUTM2GQ5VZR2 741 aa11.53□□□□□ -0.56
PMS2P3-208ENST00000533167 MRS2Q9HD23 443 aa11.53□□□□□ -0.56
PMS2P3-208ENST00000533167 EMILIN1Q9Y6C2 1016 aa11.53□□□□□ -0.56
PMS2P3-208ENST00000533167 CDK12Q9NYV4 1490 aaPredicted RBP11.52□□□□□ -0.56
PMS2P3-208ENST00000533167 PAK3O75914 559 aaPredicted RBP11.52□□□□□ -0.57
PMS2P3-208ENST00000533167 MAP3K19Q56UN5 1328 aa11.52□□□□□ -0.57
PMS2P3-208ENST00000533167 ARHGEF10O15013 1369 aa11.52□□□□□ -0.57
PMS2P3-208ENST00000533167 UBAP1LF5GYI3 381 aa11.51□□□□□ -0.57
PMS2P3-208ENST00000533167 RRS1Q15050 365 aaKnown RBP11.51□□□□□ -0.57
PMS2P3-208ENST00000533167 COL16A1Q07092 1604 aaPredicted RBP11.5□□□□□ -0.57
PMS2P3-208ENST00000533167 PEAK1Q9H792 1746 aa11.5□□□□□ -0.57
PMS2P3-208ENST00000533167 CRYBG1Q9Y4K1 1723 aa11.5□□□□□ -0.57
PMS2P3-208ENST00000533167 GCP02774 474 aa11.5□□□□□ -0.57
PMS2P3-208ENST00000533167 ARHGEF25Q86VW2 580 aa11.5□□□□□ -0.57
PMS2P3-208ENST00000533167 KIF24Q5T7B8 1368 aa11.5□□□□□ -0.57
PMS2P3-208ENST00000533167 IL13P35225 146 aa11.48□□□□□ -0.57
PMS2P3-208ENST00000533167 KCNH5Q8NCM2 988 aa11.48□□□□□ -0.57
PMS2P3-208ENST00000533167 CPDO75976 1380 aa11.48□□□□□ -0.57
PMS2P3-208ENST00000533167 SHPRHQ149N8 1683 aa11.47□□□□□ -0.57
PMS2P3-208ENST00000533167 PHRF1Q9P1Y6 1649 aaKnown RBP11.47□□□□□ -0.57
PMS2P3-208ENST00000533167 RTL1A6NKG5 1358 aa11.47□□□□□ -0.57
PMS2P3-208ENST00000533167 CABLES1Q8TDN4 633 aa11.47□□□□□ -0.57
PMS2P3-208ENST00000533167 LRRC59Q96AG4 307 aaKnown RBP11.47□□□□□ -0.57
PMS2P3-208ENST00000533167 BLMP54132 1417 aaPredicted RBP11.46□□□□□ -0.57
PMS2P3-208ENST00000533167 FLT4P35916 1363 aa11.46□□□□□ -0.57
PMS2P3-208ENST00000533167 HOXC9P31274 260 aa11.46□□□□□ -0.57
PMS2P3-208ENST00000533167 PIP4K2BP78356 416 aa11.46□□□□□ -0.57
PMS2P3-208ENST00000533167 HSP90AB2PQ58FF8 381 aa11.46□□□□□ -0.57
PMS2P3-208ENST00000533167 IP6K1Q92551 441 aa11.46□□□□□ -0.57
PMS2P3-208ENST00000533167 COL22A1Q8NFW1 1626 aaPredicted RBP11.46□□□□□ -0.58
PMS2P3-208ENST00000533167 EIF4A2Q14240 407 aaKnown RBP11.45□□□□□ -0.58
PMS2P3-208ENST00000533167 LMOD2Q6P5Q4 547 aa11.45□□□□□ -0.58
PMS2P3-208ENST00000533167 ILDR1Q86SU0 546 aaPredicted RBP11.45□□□□□ -0.58
PMS2P3-208ENST00000533167 FBXO41Q8TF61 875 aa11.45□□□□□ -0.58
PMS2P3-208ENST00000533167 ADAMTS8Q9UP79 889 aa11.45□□□□□ -0.58
PMS2P3-208ENST00000533167 SOX12O15370 315 aa11.44□□□□□ -0.58
PMS2P3-208ENST00000533167 CFAP53Q96M91 514 aa11.44□□□□□ -0.58
PMS2P3-208ENST00000533167 ABCC6O95255 1503 aa11.44□□□□□ -0.58
PMS2P3-208ENST00000533167 NCAPD2Q15021 1401 aa11.43□□□□□ -0.58
PMS2P3-208ENST00000533167 DIAPH1O60610 1272 aaKnown RBP11.43□□□□□ -0.58
PMS2P3-208ENST00000533167 FAM9BQ8IZU0 186 aa11.43□□□□□ -0.58
PMS2P3-208ENST00000533167 AXIN2Q9Y2T1 843 aa11.43□□□□□ -0.58
PMS2P3-208ENST00000533167 COL18A1P39060 1754 aa11.43□□□□□ -0.58
PMS2P3-208ENST00000533167 ABCA3Q99758 1704 aa11.43□□□□□ -0.58
PMS2P3-208ENST00000533167 KIAA0232Q92628 1395 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms