RNA–Protein interactions for RNA: ENST00000530267.5

USP35-204, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 2 BASIC

Gene USP35, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-204ENST00000530267 SLC26A8Q96RN1 970 aa19.64■□□□□ 0.74
USP35-204ENST00000530267 COL3A1P02461 1466 aaPredicted RBP19.64■□□□□ 0.74
USP35-204ENST00000530267 RARSP54136 660 aaKnown RBP19.64■□□□□ 0.73
USP35-204ENST00000530267 CCDC27Q2M243 656 aa19.64■□□□□ 0.73
USP35-204ENST00000530267 NPM2Q86SE8 214 aaKnown RBP19.64■□□□□ 0.73
USP35-204ENST00000530267 COG6Q9Y2V7 657 aa19.64■□□□□ 0.73
USP35-204ENST00000530267 ANKRD26Q9UPS8 1709 aa19.64■□□□□ 0.73
USP35-204ENST00000530267 KDM2BQ8NHM5 1336 aa19.64■□□□□ 0.73
USP35-204ENST00000530267 TMPOP42166 694 aaKnown RBP19.63■□□□□ 0.73
USP35-204ENST00000530267 POLKQ9UBT6 870 aa19.63■□□□□ 0.73
USP35-204ENST00000530267 MED14O60244 1454 aa19.63■□□□□ 0.73
USP35-204ENST00000530267 PDE4AP27815 886 aa19.63■□□□□ 0.73
USP35-204ENST00000530267 KIF20BQ96Q89 1820 aa19.63■□□□□ 0.73
USP35-204ENST00000530267 TNNQ9UQP3 1299 aa19.62■□□□□ 0.73
USP35-204ENST00000530267 UBR1Q8IWV7 1749 aa19.62■□□□□ 0.73
USP35-204ENST00000530267 EMILIN1Q9Y6C2 1016 aa19.62■□□□□ 0.73
USP35-204ENST00000530267 ATP7BP35670 1465 aa19.62■□□□□ 0.73
USP35-204ENST00000530267 ROBO2Q9HCK4 1378 aa19.61■□□□□ 0.73
USP35-204ENST00000530267 CENPQQ7L2Z9 268 aaPredicted RBP19.61■□□□□ 0.73
USP35-204ENST00000530267 MYH16Q9H6N6 1097 aa19.61■□□□□ 0.73
USP35-204ENST00000530267 CCDC61Q9Y6R9 512 aa19.61■□□□□ 0.73
USP35-204ENST00000530267 TRHP20396 242 aaPredicted RBP19.61■□□□□ 0.73
USP35-204ENST00000530267 ANP32AP39687 249 aaKnown RBP19.6■□□□□ 0.73
USP35-204ENST00000530267 RIPK4P57078 832 aa19.6■□□□□ 0.73
USP35-204ENST00000530267 TRIM35Q9UPQ4 493 aa19.6■□□□□ 0.73
USP35-204ENST00000530267 HMOX1P09601 288 aa19.6■□□□□ 0.73
USP35-204ENST00000530267 CLUAP1Q96AJ1 413 aa19.6■□□□□ 0.73
USP35-204ENST00000530267 PRR36Q9H6K5 1346 aa19.58■□□□□ 0.73
USP35-204ENST00000530267 PDE3AQ14432 1141 aa19.58■□□□□ 0.72
USP35-204ENST00000530267 RRS1Q15050 365 aaKnown RBP19.58■□□□□ 0.72
USP35-204ENST00000530267 PNPLA6Q8IY17 1366 aa19.58■□□□□ 0.72
USP35-204ENST00000530267 CPSF1Q10570 1443 aaKnown RBP19.58■□□□□ 0.72
USP35-204ENST00000530267 ADGRB2O60241 1585 aa19.58■□□□□ 0.72
USP35-204ENST00000530267 ADAMTS13Q76LX8 1427 aa19.57■□□□□ 0.72
USP35-204ENST00000530267 BACH2Q9BYV9 841 aa19.57■□□□□ 0.72
USP35-204ENST00000530267 FAM135BQ49AJ0 1406 aa19.57■□□□□ 0.72
USP35-204ENST00000530267 EDC4Q6P2E9 1401 aaKnown RBP19.57■□□□□ 0.72
USP35-204ENST00000530267 MS4A1P11836 297 aa19.57■□□□□ 0.72
USP35-204ENST00000530267 PRKAR2BP31323 418 aa19.57■□□□□ 0.72
USP35-204ENST00000530267 RLBP1P12271 317 aa19.56■□□□□ 0.72
USP35-204ENST00000530267 RGS3P49796 1198 aa19.56■□□□□ 0.72
USP35-204ENST00000530267 MAP2P11137 1827 aaKnown RBP19.56■□□□□ 0.72
USP35-204ENST00000530267 EXOSC9Q06265 439 aaKnown RBP19.56■□□□□ 0.72
USP35-204ENST00000530267 COG3Q96JB2 828 aa19.56■□□□□ 0.72
USP35-204ENST00000530267 EID1Q9Y6B2 187 aa19.55■□□□□ 0.72
USP35-204ENST00000530267 TECPR2O15040 1411 aa19.55■□□□□ 0.72
USP35-204ENST00000530267 IGHDP01880 384 aa19.55■□□□□ 0.72
USP35-204ENST00000530267 PAK3O75914 559 aaPredicted RBP19.54■□□□□ 0.72
USP35-204ENST00000530267 CPS1P31327 1500 aa19.54■□□□□ 0.72
USP35-204ENST00000530267 SIRT1Q96EB6 747 aa19.54■□□□□ 0.72
USP35-204ENST00000530267 RSPH6AQ9H0K4 717 aa19.53■□□□□ 0.72
USP35-204ENST00000530267 FCHSD2O94868 740 aa19.53■□□□□ 0.72
USP35-204ENST00000530267 PHACTR3Q96KR7 559 aa19.53■□□□□ 0.72
USP35-204ENST00000530267 LAS1LQ9Y4W2 734 aaKnown RBP19.53■□□□□ 0.72
USP35-204ENST00000530267 PLEKHG1Q9ULL1 1385 aa19.53■□□□□ 0.72
USP35-204ENST00000530267 KNDC1Q76NI1 1749 aa19.52■□□□□ 0.72
USP35-204ENST00000530267 IPO9Q96P70 1041 aaKnown RBP19.52■□□□□ 0.71
USP35-204ENST00000530267 PNNQ9H307 717 aaKnown RBP19.52■□□□□ 0.71
USP35-204ENST00000530267 NOP58Q9Y2X3 529 aaKnown RBP19.52■□□□□ 0.71
USP35-204ENST00000530267 NEFMP07197 916 aa19.51■□□□□ 0.71
USP35-204ENST00000530267 CDC42BPGQ6DT37 1551 aa19.51■□□□□ 0.71
USP35-204ENST00000530267 SOX12O15370 315 aa19.51■□□□□ 0.71
USP35-204ENST00000530267 NCBP3Q53F19 620 aaKnown RBP19.51■□□□□ 0.71
USP35-204ENST00000530267 AMOTL2Q9Y2J4 779 aa19.51■□□□□ 0.71
USP35-204ENST00000530267 LRRC7Q96NW7 1537 aa19.5■□□□□ 0.71
USP35-204ENST00000530267 THUMPD2Q9BTF0 503 aaKnown RBP19.5■□□□□ 0.71
USP35-204ENST00000530267 SMC4Q9NTJ3 1288 aa19.5■□□□□ 0.71
USP35-204ENST00000530267 PTPRUQ92729 1446 aa19.5■□□□□ 0.71
USP35-204ENST00000530267 ACEP12821 1306 aa19.5■□□□□ 0.71
USP35-204ENST00000530267 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.49■□□□□ 0.71
USP35-204ENST00000530267 C3P01024 1663 aa19.49■□□□□ 0.71
USP35-204ENST00000530267 IL13P35225 146 aa19.49■□□□□ 0.71
USP35-204ENST00000530267 ZNF692Q9BU19 519 aaPredicted RBP19.49■□□□□ 0.71
USP35-204ENST00000530267 PMFBP1Q8TBY8 1022 aa19.47■□□□□ 0.71
USP35-204ENST00000530267 FTSJ3Q8IY81 847 aaKnown RBP19.47■□□□□ 0.71
USP35-204ENST00000530267 SSH1Q8WYL5 1049 aa19.47■□□□□ 0.71
USP35-204ENST00000530267 ZKSCAN2Q63HK3 967 aa19.45■□□□□ 0.7
USP35-204ENST00000530267 ZBTB47Q9UFB7 747 aaPredicted RBP19.45■□□□□ 0.7
USP35-204ENST00000530267 PCDHB15Q9Y5E8 787 aa19.45■□□□□ 0.7
USP35-204ENST00000530267 ITSN1Q15811 1721 aa19.45■□□□□ 0.7
USP35-204ENST00000530267 TTC21BQ7Z4L5 1316 aa19.45■□□□□ 0.7
USP35-204ENST00000530267 MON2Q7Z3U7 1717 aa19.45■□□□□ 0.7
USP35-204ENST00000530267 FER1L4A9Z1Z3 1794 aa19.45■□□□□ 0.7
USP35-204ENST00000530267 THEMISQ8N1K5 641 aaPredicted RBP19.44■□□□□ 0.7
USP35-204ENST00000530267 NFE2L2Q16236 605 aa19.44■□□□□ 0.7
USP35-204ENST00000530267 IL16Q14005 1332 aa19.43■□□□□ 0.7
USP35-204ENST00000530267 DZIP1LQ8IYY4 767 aaKnown RBP19.43■□□□□ 0.7
USP35-204ENST00000530267 AATKQ6ZMQ8 1374 aa19.43■□□□□ 0.7
USP35-204ENST00000530267 NOB1Q9ULX3 412 aaKnown RBP19.43■□□□□ 0.7
USP35-204ENST00000530267 AKAP12Q02952 1782 aa19.43■□□□□ 0.7
USP35-204ENST00000530267 TRIM27P14373 513 aa19.42■□□□□ 0.7
USP35-204ENST00000530267 CDK12Q9NYV4 1490 aaPredicted RBP19.42■□□□□ 0.7
USP35-204ENST00000530267 CT47B1P0C2W7 299 aaPredicted RBP19.42■□□□□ 0.7
USP35-204ENST00000530267 MVPQ14764 893 aaKnown RBP19.42■□□□□ 0.7
USP35-204ENST00000530267 FAM83GA6ND36 823 aa19.41■□□□□ 0.7
USP35-204ENST00000530267 C8orf34Q49A92 452 aa19.41■□□□□ 0.7
USP35-204ENST00000530267 TBX22Q9Y458 520 aa19.41■□□□□ 0.7
USP35-204ENST00000530267 PLEKHG3A1L390 1219 aa19.4■□□□□ 0.7
USP35-204ENST00000530267 ELL2O00472 640 aaPredicted RBP19.4■□□□□ 0.7
USP35-204ENST00000530267 FAM161AQ3B820 660 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms