RNA–Protein interactions for RNA: ENST00000528462.5

PACSIN3-205, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 2

Gene PACSIN3, Length 1,560 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-205ENST00000528462 TTC21AQ8NDW8 1320 aa30.16■■■□□ 2.42
PACSIN3-205ENST00000528462 AHDC1Q5TGY3 1603 aaPredicted RBP30.16■■■□□ 2.42
PACSIN3-205ENST00000528462 AMER1Q5JTC6 1135 aaPredicted RBP30.15■■■□□ 2.42
PACSIN3-205ENST00000528462 SBNO1A3KN83 1393 aa30.15■■■□□ 2.42
PACSIN3-205ENST00000528462 PIP4K2BP78356 416 aa30.13■■■□□ 2.41
PACSIN3-205ENST00000528462 DDX17Q92841 729 aaKnown RBP30.13■■■□□ 2.41
PACSIN3-205ENST00000528462 NSD2O96028 1365 aa30.12■■■□□ 2.41
PACSIN3-205ENST00000528462 TRPM3Q9HCF6 1732 aaPredicted RBP30.11■■■□□ 2.41
PACSIN3-205ENST00000528462 FYB1O15117 783 aa30.1■■■□□ 2.41
PACSIN3-205ENST00000528462 XPCQ01831 940 aaPredicted RBP30.1■■■□□ 2.41
PACSIN3-205ENST00000528462 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.1■■■□□ 2.41
PACSIN3-205ENST00000528462 DIEXFQ68CQ4 756 aaKnown RBP30.07■■■□□ 2.4
PACSIN3-205ENST00000528462 SPATA31A3Q5VYP0 1347 aa30.06■■■□□ 2.4
PACSIN3-205ENST00000528462 SCAF1Q9H7N4 1312 aaKnown RBP30.06■■■□□ 2.4
PACSIN3-205ENST00000528462 USP31Q70CQ4 1352 aa30.06■■■□□ 2.4
PACSIN3-205ENST00000528462 TNS3Q68CZ2 1445 aa30.05■■■□□ 2.4
PACSIN3-205ENST00000528462 PAK3O75914 559 aaPredicted RBP30.05■■■□□ 2.4
PACSIN3-205ENST00000528462 NME9Q86XW9 330 aa30.04■■■□□ 2.4
PACSIN3-205ENST00000528462 PIK3C2AO00443 1686 aa30.03■■■□□ 2.4
PACSIN3-205ENST00000528462 ALS2Q96Q42 1657 aa30.03■■■□□ 2.4
PACSIN3-205ENST00000528462 ABTB2Q8N961 1025 aa30.03■■■□□ 2.4
PACSIN3-205ENST00000528462 ARHGEF10O15013 1369 aa30.02■■■□□ 2.4
PACSIN3-205ENST00000528462 KIF20BQ96Q89 1820 aa30.01■■■□□ 2.4
PACSIN3-205ENST00000528462 LRRC59Q96AG4 307 aaKnown RBP30.01■■■□□ 2.39
PACSIN3-205ENST00000528462 OVOS2A0A0J9YW53 1432 aa30.01■■■□□ 2.39
PACSIN3-205ENST00000528462 OVOS2Q6IE36 1432 aa30.01■■■□□ 2.39
PACSIN3-205ENST00000528462 GGNBP2Q9H3C7 697 aa30■■■□□ 2.39
PACSIN3-205ENST00000528462 USP54Q70EL1 1684 aa30■■■□□ 2.39
PACSIN3-205ENST00000528462 COL16A1Q07092 1604 aaPredicted RBP29.99■■■□□ 2.39
PACSIN3-205ENST00000528462 CC2D1BQ5T0F9 858 aaKnown RBP29.98■■■□□ 2.39
PACSIN3-205ENST00000528462 PHLPP1O60346 1717 aa29.98■■■□□ 2.39
PACSIN3-205ENST00000528462 NLRP6P59044 892 aa29.98■■■□□ 2.39
PACSIN3-205ENST00000528462 COG3Q96JB2 828 aa29.98■■■□□ 2.39
PACSIN3-205ENST00000528462 NLRP13Q86W25 1043 aa29.97■■■□□ 2.39
PACSIN3-205ENST00000528462 PARD3Q8TEW0 1356 aa29.97■■■□□ 2.39
PACSIN3-205ENST00000528462 ANKRD26Q9UPS8 1709 aa29.97■■■□□ 2.39
PACSIN3-205ENST00000528462 RALBP1Q15311 655 aa29.95■■■□□ 2.39
PACSIN3-205ENST00000528462 PRKRIP1Q9H875 184 aaPredicted RBP29.95■■■□□ 2.39
PACSIN3-205ENST00000528462 ZRANB1Q9UGI0 708 aa29.95■■■□□ 2.39
PACSIN3-205ENST00000528462 USP19O94966 1318 aa29.94■■■□□ 2.38
PACSIN3-205ENST00000528462 ANP32CO43423 234 aa29.94■■■□□ 2.38
PACSIN3-205ENST00000528462 MORC1Q86VD1 984 aa29.94■■■□□ 2.38
PACSIN3-205ENST00000528462 MED1Q15648 1581 aaPredicted RBP29.93■■■□□ 2.38
PACSIN3-205ENST00000528462 LMOD2Q6P5Q4 547 aa29.93■■■□□ 2.38
PACSIN3-205ENST00000528462 MARF1Q9Y4F3 1742 aaKnown RBP29.91■■■□□ 2.38
PACSIN3-205ENST00000528462 NUTM2GQ5VZR2 741 aa29.9■■■□□ 2.38
PACSIN3-205ENST00000528462 SLIT3O75094 1523 aa29.89■■■□□ 2.38
PACSIN3-205ENST00000528462 AATKQ6ZMQ8 1374 aa29.88■■■□□ 2.37
PACSIN3-205ENST00000528462 FBXO41Q8TF61 875 aa29.88■■■□□ 2.37
PACSIN3-205ENST00000528462 PNPLA6Q8IY17 1366 aa29.88■■■□□ 2.37
PACSIN3-205ENST00000528462 KCNH5Q8NCM2 988 aa29.87■■■□□ 2.37
PACSIN3-205ENST00000528462 COL22A1Q8NFW1 1626 aaPredicted RBP29.86■■■□□ 2.37
PACSIN3-205ENST00000528462 HSPA1LP34931 641 aa29.86■■■□□ 2.37
PACSIN3-205ENST00000528462 CNGB1Q14028 1251 aaPredicted RBP29.85■■■□□ 2.37
PACSIN3-205ENST00000528462 GCP02774 474 aa29.84■■■□□ 2.37
PACSIN3-205ENST00000528462 JCADQ9P266 1359 aa29.83■■■□□ 2.37
PACSIN3-205ENST00000528462 CRYBG1Q9Y4K1 1723 aa29.83■■■□□ 2.37
PACSIN3-205ENST00000528462 NFAT5O94916 1531 aa29.81■■■□□ 2.36
PACSIN3-205ENST00000528462 MYBBP1AQ9BQG0 1328 aaKnown RBP29.81■■■□□ 2.36
PACSIN3-205ENST00000528462 SHPRHQ149N8 1683 aa29.81■■■□□ 2.36
PACSIN3-205ENST00000528462 PPP2R1AP30153 589 aa29.79■■■□□ 2.36
PACSIN3-205ENST00000528462 PHRF1Q9P1Y6 1649 aaKnown RBP29.79■■■□□ 2.36
PACSIN3-205ENST00000528462 TNNT2P45379 298 aaPredicted RBP29.78■■■□□ 2.36
PACSIN3-205ENST00000528462 CABLES1Q8TDN4 633 aa29.77■■■□□ 2.36
PACSIN3-205ENST00000528462 SMG6Q86US8 1419 aaKnown RBP29.76■■■□□ 2.35
PACSIN3-205ENST00000528462 POLKQ9UBT6 870 aa29.76■■■□□ 2.35
PACSIN3-205ENST00000528462 CPDO75976 1380 aa29.76■■■□□ 2.35
PACSIN3-205ENST00000528462 KIF24Q5T7B8 1368 aa29.76■■■□□ 2.35
PACSIN3-205ENST00000528462 ABCA3Q99758 1704 aa29.75■■■□□ 2.35
PACSIN3-205ENST00000528462 FBLN1P23142 703 aa29.74■■■□□ 2.35
PACSIN3-205ENST00000528462 ARHGEF25Q86VW2 580 aa29.73■■■□□ 2.35
PACSIN3-205ENST00000528462 MAP3K19Q56UN5 1328 aa29.73■■■□□ 2.35
PACSIN3-205ENST00000528462 SPATA31A6Q5VVP1 1343 aa29.73■■■□□ 2.35
PACSIN3-205ENST00000528462 SOX12O15370 315 aa29.72■■■□□ 2.35
PACSIN3-205ENST00000528462 MIER1Q8N108 512 aa29.72■■■□□ 2.35
PACSIN3-205ENST00000528462 MTHFSP49914 203 aa29.71■■■□□ 2.35
PACSIN3-205ENST00000528462 RRS1Q15050 365 aaKnown RBP29.71■■■□□ 2.35
PACSIN3-205ENST00000528462 MAP2P11137 1827 aaKnown RBP29.71■■■□□ 2.35
PACSIN3-205ENST00000528462 HAP1P54257 671 aaPredicted RBP29.69■■■□□ 2.34
PACSIN3-205ENST00000528462 EMILIN1Q9Y6C2 1016 aa29.69■■■□□ 2.34
PACSIN3-205ENST00000528462 RTL1A6NKG5 1358 aa29.69■■■□□ 2.34
PACSIN3-205ENST00000528462 INSRP06213 1382 aa29.69■■■□□ 2.34
PACSIN3-205ENST00000528462 PLEKHG5O94827 1062 aa29.69■■■□□ 2.34
PACSIN3-205ENST00000528462 CDK12Q9NYV4 1490 aaPredicted RBP29.67■■■□□ 2.34
PACSIN3-205ENST00000528462 ZC3H6P61129 1189 aaKnown RBP29.67■■■□□ 2.34
PACSIN3-205ENST00000528462 KIAA0232Q92628 1395 aa29.67■■■□□ 2.34
PACSIN3-205ENST00000528462 ABCC6O95255 1503 aa29.66■■■□□ 2.34
PACSIN3-205ENST00000528462 CCER2I3L3R5 266 aa29.66■■■□□ 2.34
PACSIN3-205ENST00000528462 FLT4P35916 1363 aa29.66■■■□□ 2.34
PACSIN3-205ENST00000528462 LTN1O94822 1766 aa29.64■■■□□ 2.34
PACSIN3-205ENST00000528462 IP6K1Q92551 441 aa29.64■■■□□ 2.33
PACSIN3-205ENST00000528462 AMPHP49418 695 aa29.63■■■□□ 2.33
PACSIN3-205ENST00000528462 PEAK1Q9H792 1746 aa29.62■■■□□ 2.33
PACSIN3-205ENST00000528462 PPM1GO15355 546 aaPredicted RBP29.61■■■□□ 2.33
PACSIN3-205ENST00000528462 HOXC9P31274 260 aa29.61■■■□□ 2.33
PACSIN3-205ENST00000528462 PRDM11Q9NQV5 511 aa29.61■■■□□ 2.33
PACSIN3-205ENST00000528462 CFAP53Q96M91 514 aa29.6■■■□□ 2.33
PACSIN3-205ENST00000528462 BLMP54132 1417 aaPredicted RBP29.6■■■□□ 2.33
PACSIN3-205ENST00000528462 COL18A1P39060 1754 aa29.59■■■□□ 2.33
PACSIN3-205ENST00000528462 COL3A1P02461 1466 aaPredicted RBP29.58■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms