RNA–Protein interactions for RNA: ENST00000525566.5

TXNRD1-208, Transcript of thioredoxin reductase 1, human

TSL 1 (best) BASIC

Gene TXNRD1, Length 3,836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TXNRD1-208	ENST00000525566	CENPQ	Q7L2Z9	268 aa	Predicted RBP	11.43	□□□□□ -0.58
TXNRD1-208	ENST00000525566	NME9	Q86XW9	330 aa		11.43	□□□□□ -0.58
TXNRD1-208	ENST00000525566	PANK1	Q8TE04	598 aa		11.43	□□□□□ -0.58
TXNRD1-208	ENST00000525566	PDE4A	P27815	886 aa		11.42	□□□□□ -0.58
TXNRD1-208	ENST00000525566	SLC26A8	Q96RN1	970 aa		11.42	□□□□□ -0.58
TXNRD1-208	ENST00000525566	POLK	Q9UBT6	870 aa		11.42	□□□□□ -0.58
TXNRD1-208	ENST00000525566	NUTM2F	A1L443	756 aa		11.42	□□□□□ -0.58
TXNRD1-208	ENST00000525566	ANP32A	P39687	249 aa	Known RBP	11.42	□□□□□ -0.58
TXNRD1-208	ENST00000525566	COG6	Q9Y2V7	657 aa		11.42	□□□□□ -0.58
TXNRD1-208	ENST00000525566	PDE3A	Q14432	1141 aa		11.42	□□□□□ -0.58
TXNRD1-208	ENST00000525566	ZRANB1	Q9UGI0	708 aa		11.42	□□□□□ -0.58
TXNRD1-208	ENST00000525566	ATP7B	P35670	1465 aa		11.42	□□□□□ -0.58
TXNRD1-208	ENST00000525566	KDM2B	Q8NHM5	1336 aa		11.42	□□□□□ -0.58
TXNRD1-208	ENST00000525566	MS4A1	P11836	297 aa		11.41	□□□□□ -0.58
TXNRD1-208	ENST00000525566	TRH	P20396	242 aa	Predicted RBP	11.41	□□□□□ -0.58
TXNRD1-208	ENST00000525566	TSR2	Q969E8	191 aa	Known RBP	11.41	□□□□□ -0.58
TXNRD1-208	ENST00000525566	RIPK4	P57078	832 aa		11.41	□□□□□ -0.58
TXNRD1-208	ENST00000525566	SIRT1	Q96EB6	747 aa		11.41	□□□□□ -0.58
TXNRD1-208	ENST00000525566	NPM2	Q86SE8	214 aa	Known RBP	11.41	□□□□□ -0.58
TXNRD1-208	ENST00000525566	PNN	Q9H307	717 aa	Known RBP	11.41	□□□□□ -0.58
TXNRD1-208	ENST00000525566	EID1	Q9Y6B2	187 aa		11.41	□□□□□ -0.58
TXNRD1-208	ENST00000525566	COL3A1	P02461	1466 aa	Predicted RBP	11.4	□□□□□ -0.58
TXNRD1-208	ENST00000525566	NCBP3	Q53F19	620 aa	Known RBP	11.4	□□□□□ -0.58
TXNRD1-208	ENST00000525566	EMILIN1	Q9Y6C2	1016 aa		11.4	□□□□□ -0.58
TXNRD1-208	ENST00000525566	FAM135B	Q49AJ0	1406 aa		11.4	□□□□□ -0.58
TXNRD1-208	ENST00000525566	MYT1	Q01538	1121 aa		11.4	□□□□□ -0.58
TXNRD1-208	ENST00000525566	TRIM35	Q9UPQ4	493 aa		11.4	□□□□□ -0.58
TXNRD1-208	ENST00000525566	NEFM	P07197	916 aa		11.4	□□□□□ -0.59
TXNRD1-208	ENST00000525566	PNPLA6	Q8IY17	1366 aa		11.4	□□□□□ -0.59
TXNRD1-208	ENST00000525566	ROBO2	Q9HCK4	1378 aa		11.4	□□□□□ -0.59
TXNRD1-208	ENST00000525566	COG3	Q96JB2	828 aa		11.39	□□□□□ -0.59
TXNRD1-208	ENST00000525566	CPSF1	Q10570	1443 aa	Known RBP	11.39	□□□□□ -0.59
TXNRD1-208	ENST00000525566	EDC4	Q6P2E9	1401 aa	Known RBP	11.39	□□□□□ -0.59
TXNRD1-208	ENST00000525566	BACH2	Q9BYV9	841 aa		11.39	□□□□□ -0.59
TXNRD1-208	ENST00000525566	ANKRD26	Q9UPS8	1709 aa		11.39	□□□□□ -0.59
TXNRD1-208	ENST00000525566	FCHSD2	O94868	740 aa		11.39	□□□□□ -0.59
TXNRD1-208	ENST00000525566	HMOX1	P09601	288 aa		11.39	□□□□□ -0.59
TXNRD1-208	ENST00000525566	PRKAR2B	P31323	418 aa		11.39	□□□□□ -0.59
TXNRD1-208	ENST00000525566	CLUAP1	Q96AJ1	413 aa		11.39	□□□□□ -0.59
TXNRD1-208	ENST00000525566	UBR1	Q8IWV7	1749 aa		11.38	□□□□□ -0.59
TXNRD1-208	ENST00000525566	TECPR2	O15040	1411 aa		11.38	□□□□□ -0.59
TXNRD1-208	ENST00000525566	ADAMTS13	Q76LX8	1427 aa		11.38	□□□□□ -0.59
TXNRD1-208	ENST00000525566	PRR36	Q9H6K5	1346 aa		11.38	□□□□□ -0.59
TXNRD1-208	ENST00000525566	KIF20B	Q96Q89	1820 aa		11.38	□□□□□ -0.59
TXNRD1-208	ENST00000525566	EXOSC9	Q06265	439 aa	Known RBP	11.38	□□□□□ -0.59
TXNRD1-208	ENST00000525566	RRS1	Q15050	365 aa	Known RBP	11.38	□□□□□ -0.59
TXNRD1-208	ENST00000525566	TNN	Q9UQP3	1299 aa		11.38	□□□□□ -0.59
TXNRD1-208	ENST00000525566	RGS3	P49796	1198 aa		11.37	□□□□□ -0.59
TXNRD1-208	ENST00000525566	ZNF692	Q9BU19	519 aa	Predicted RBP	11.37	□□□□□ -0.59
TXNRD1-208	ENST00000525566	ADGRB2	O60241	1585 aa		11.37	□□□□□ -0.59
TXNRD1-208	ENST00000525566	PLEKHG1	Q9ULL1	1385 aa		11.37	□□□□□ -0.59
TXNRD1-208	ENST00000525566	IGHD	P01880	384 aa		11.36	□□□□□ -0.59
TXNRD1-208	ENST00000525566	RLBP1	P12271	317 aa		11.36	□□□□□ -0.59
TXNRD1-208	ENST00000525566	IPO9	Q96P70	1041 aa	Known RBP	11.36	□□□□□ -0.59
TXNRD1-208	ENST00000525566	RSPH6A	Q9H0K4	717 aa		11.36	□□□□□ -0.59
TXNRD1-208	ENST00000525566	AMOTL2	Q9Y2J4	779 aa		11.36	□□□□□ -0.59
TXNRD1-208	ENST00000525566	NOP58	Q9Y2X3	529 aa	Known RBP	11.36	□□□□□ -0.59
TXNRD1-208	ENST00000525566	LAS1L	Q9Y4W2	734 aa	Known RBP	11.35	□□□□□ -0.59
TXNRD1-208	ENST00000525566	PHACTR3	Q96KR7	559 aa		11.35	□□□□□ -0.59
TXNRD1-208	ENST00000525566	SMC4	Q9NTJ3	1288 aa		11.35	□□□□□ -0.59
TXNRD1-208	ENST00000525566	CPS1	P31327	1500 aa		11.35	□□□□□ -0.59
TXNRD1-208	ENST00000525566	THEMIS	Q8N1K5	641 aa	Predicted RBP	11.35	□□□□□ -0.59
TXNRD1-208	ENST00000525566	ACE	P12821	1306 aa		11.35	□□□□□ -0.59
TXNRD1-208	ENST00000525566	MAP2	P11137	1827 aa	Known RBP	11.34	□□□□□ -0.59
TXNRD1-208	ENST00000525566	IL13	P35225	146 aa		11.34	□□□□□ -0.59
TXNRD1-208	ENST00000525566	CT47B1	P0C2W7	299 aa	Predicted RBP	11.34	□□□□□ -0.59
TXNRD1-208	ENST00000525566	ZKSCAN2	Q63HK3	967 aa		11.34	□□□□□ -0.59
TXNRD1-208	ENST00000525566	FTSJ3	Q8IY81	847 aa	Known RBP	11.34	□□□□□ -0.59
TXNRD1-208	ENST00000525566	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.34	□□□□□ -0.59
TXNRD1-208	ENST00000525566	IL16	Q14005	1332 aa		11.34	□□□□□ -0.59
TXNRD1-208	ENST00000525566	PAK3	O75914	559 aa	Predicted RBP	11.33	□□□□□ -0.6
TXNRD1-208	ENST00000525566	CDC42BPG	Q6DT37	1551 aa		11.33	□□□□□ -0.6
TXNRD1-208	ENST00000525566	KNDC1	Q76NI1	1749 aa		11.33	□□□□□ -0.6
TXNRD1-208	ENST00000525566	SOX12	O15370	315 aa		11.33	□□□□□ -0.6
TXNRD1-208	ENST00000525566	SSH1	Q8WYL5	1049 aa		11.33	□□□□□ -0.6
TXNRD1-208	ENST00000525566	TTC21B	Q7Z4L5	1316 aa		11.33	□□□□□ -0.6
TXNRD1-208	ENST00000525566	PMFBP1	Q8TBY8	1022 aa		11.32	□□□□□ -0.6
TXNRD1-208	ENST00000525566	THUMPD2	Q9BTF0	503 aa	Known RBP	11.32	□□□□□ -0.6
TXNRD1-208	ENST00000525566	AATK	Q6ZMQ8	1374 aa		11.32	□□□□□ -0.6
TXNRD1-208	ENST00000525566	PTPRU	Q92729	1446 aa		11.32	□□□□□ -0.6
TXNRD1-208	ENST00000525566	NFE2L2	Q16236	605 aa		11.32	□□□□□ -0.6
TXNRD1-208	ENST00000525566	TBX22	Q9Y458	520 aa		11.32	□□□□□ -0.6
TXNRD1-208	ENST00000525566	LRRC7	Q96NW7	1537 aa		11.32	□□□□□ -0.6
TXNRD1-208	ENST00000525566	DZIP1L	Q8IYY4	767 aa	Known RBP	11.32	□□□□□ -0.6
TXNRD1-208	ENST00000525566	PLEKHG3	A1L390	1219 aa		11.31	□□□□□ -0.6
TXNRD1-208	ENST00000525566	PCDHB15	Q9Y5E8	787 aa		11.31	□□□□□ -0.6
TXNRD1-208	ENST00000525566	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	11.3	□□□□□ -0.6
TXNRD1-208	ENST00000525566	C3	P01024	1663 aa		11.3	□□□□□ -0.6
TXNRD1-208	ENST00000525566	MVP	Q14764	893 aa	Known RBP	11.3	□□□□□ -0.6
TXNRD1-208	ENST00000525566	FAM161A	Q3B820	660 aa		11.3	□□□□□ -0.6
TXNRD1-208	ENST00000525566	NOB1	Q9ULX3	412 aa	Known RBP	11.3	□□□□□ -0.6
TXNRD1-208	ENST00000525566	CDK12	Q9NYV4	1490 aa	Predicted RBP	11.3	□□□□□ -0.6
TXNRD1-208	ENST00000525566	AAMP	Q13685	434 aa		11.3	□□□□□ -0.6
TXNRD1-208	ENST00000525566	TRIM27	P14373	513 aa		11.29	□□□□□ -0.6
TXNRD1-208	ENST00000525566	NGDN	Q8NEJ9	315 aa	Known RBP	11.29	□□□□□ -0.6
TXNRD1-208	ENST00000525566	ITPRIP	Q8IWB1	547 aa		11.29	□□□□□ -0.6
TXNRD1-208	ENST00000525566	MON2	Q7Z3U7	1717 aa		11.28	□□□□□ -0.6
TXNRD1-208	ENST00000525566	CALD1	Q05682	793 aa	Known RBP	11.28	□□□□□ -0.6
TXNRD1-208	ENST00000525566	ATF7IP	Q6VMQ6	1270 aa		11.28	□□□□□ -0.6
TXNRD1-208	ENST00000525566	ITSN1	Q15811	1721 aa		11.28	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms