RNA–Protein interactions for RNA: ENST00000525428.5

CLNS1A-204, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLNS1A, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-204ENST00000525428 PPP4R3BQ5MIZ7 849 aa14.03□□□□□ -0.16
CLNS1A-204ENST00000525428 DNTTIP2Q5QJE6 756 aaKnown RBP14.03□□□□□ -0.16
CLNS1A-204ENST00000525428 CCDC94Q9BW85 323 aaPredicted RBP14.03□□□□□ -0.16
CLNS1A-204ENST00000525428 RWDD1Q9H446 243 aaPredicted RBP14.03□□□□□ -0.16
CLNS1A-204ENST00000525428 NOL7Q9UMY1 257 aaKnown RBP14.03□□□□□ -0.16
CLNS1A-204ENST00000525428 RAB3GAP1Q15042 981 aa14.03□□□□□ -0.16
CLNS1A-204ENST00000525428 MTERF4Q7Z6M4 381 aaKnown RBP14.03□□□□□ -0.16
CLNS1A-204ENST00000525428 MPNDQ8N594 471 aa14.03□□□□□ -0.16
CLNS1A-204ENST00000525428 STAC3Q96MF2 364 aa14.03□□□□□ -0.16
CLNS1A-204ENST00000525428 ESF1Q9H501 851 aaKnown RBP14.03□□□□□ -0.16
CLNS1A-204ENST00000525428 UHRF1BP1Q6BDS2 1440 aa14.02□□□□□ -0.16
CLNS1A-204ENST00000525428 VGLL3A8MV65 326 aa14.02□□□□□ -0.16
CLNS1A-204ENST00000525428 NAP1L2Q9ULW6 460 aaPredicted RBP14.02□□□□□ -0.16
CLNS1A-204ENST00000525428 VIRMAQ69YN4 1812 aaKnown RBP14.02□□□□□ -0.16
CLNS1A-204ENST00000525428 GOLGA6L22H0YM25 854 aa14.02□□□□□ -0.17
CLNS1A-204ENST00000525428 CEP152O94986 1710 aa14.02□□□□□ -0.17
CLNS1A-204ENST00000525428 RRP7AQ9Y3A4 280 aaKnown RBP14.01□□□□□ -0.17
CLNS1A-204ENST00000525428 DDIT3P35638 169 aa14.01□□□□□ -0.17
CLNS1A-204ENST00000525428 RBSNQ9H1K0 784 aa14.01□□□□□ -0.17
CLNS1A-204ENST00000525428 CD2BP2O95400 341 aaKnown RBP14.01□□□□□ -0.17
CLNS1A-204ENST00000525428 ADGRF5Q8IZF2 1346 aa14.01□□□□□ -0.17
CLNS1A-204ENST00000525428 SIGLEC1Q9BZZ2 1709 aa14□□□□□ -0.17
CLNS1A-204ENST00000525428 DEPDC5O75140 1603 aa14□□□□□ -0.17
CLNS1A-204ENST00000525428 ZNF500O60304 480 aaPredicted RBP14□□□□□ -0.17
CLNS1A-204ENST00000525428 INSRP06213 1382 aa14□□□□□ -0.17
CLNS1A-204ENST00000525428 TMF1P82094 1093 aa14□□□□□ -0.17
CLNS1A-204ENST00000525428 MCTP1Q6DN14 999 aa14□□□□□ -0.17
CLNS1A-204ENST00000525428 TESK2Q96S53 571 aa14□□□□□ -0.17
CLNS1A-204ENST00000525428 ABCC3O15438 1527 aa14□□□□□ -0.17
CLNS1A-204ENST00000525428 VWDEQ8N2E2 1590 aa14□□□□□ -0.17
CLNS1A-204ENST00000525428 SASS6Q6UVJ0 657 aa13.99□□□□□ -0.17
CLNS1A-204ENST00000525428 PTPRTO14522 1441 aa13.99□□□□□ -0.17
CLNS1A-204ENST00000525428 PDIA4P13667 645 aaKnown RBP13.99□□□□□ -0.17
CLNS1A-204ENST00000525428 MAPK8IP2Q13387 824 aaPredicted RBP13.99□□□□□ -0.17
CLNS1A-204ENST00000525428 CFAP70Q5T0N1 1121 aa13.99□□□□□ -0.17
CLNS1A-204ENST00000525428 UTP14CQ5TAP6 766 aaKnown RBP13.99□□□□□ -0.17
CLNS1A-204ENST00000525428 RBM42Q9BTD8 480 aaKnown RBP13.99□□□□□ -0.17
CLNS1A-204ENST00000525428 SPDYE4A6NLX3 237 aa13.98□□□□□ -0.17
CLNS1A-204ENST00000525428 SMC5Q8IY18 1101 aa13.98□□□□□ -0.17
CLNS1A-204ENST00000525428 ZKSCAN5Q9Y2L8 839 aa13.98□□□□□ -0.17
CLNS1A-204ENST00000525428 PRIM1P49642 420 aaKnown RBP13.98□□□□□ -0.17
CLNS1A-204ENST00000525428 STAG3Q9UJ98 1225 aa13.98□□□□□ -0.17
CLNS1A-204ENST00000525428 PLCD3Q8N3E9 789 aa13.98□□□□□ -0.17
CLNS1A-204ENST00000525428 RNF214Q8ND24 703 aa13.98□□□□□ -0.17
CLNS1A-204ENST00000525428 CSPP1Q1MSJ5 1256 aa13.97□□□□□ -0.17
CLNS1A-204ENST00000525428 KLHL40Q2TBA0 621 aa13.97□□□□□ -0.17
CLNS1A-204ENST00000525428 EIF2AK4Q9P2K8 1649 aaKnown RBP13.97□□□□□ -0.17
CLNS1A-204ENST00000525428 ZBTB22O15209 634 aa13.97□□□□□ -0.17
CLNS1A-204ENST00000525428 ZSCAN23Q3MJ62 389 aa13.97□□□□□ -0.17
CLNS1A-204ENST00000525428 RBM27Q9P2N5 1060 aaKnown RBP13.97□□□□□ -0.17
CLNS1A-204ENST00000525428 EFCAB6Q5THR3 1501 aa13.97□□□□□ -0.17
CLNS1A-204ENST00000525428 TET3O43151 1660 aa13.97□□□□□ -0.17
CLNS1A-204ENST00000525428 CLTCL1P53675 1640 aa13.97□□□□□ -0.17
CLNS1A-204ENST00000525428 PTMAP06454 111 aaKnown RBP13.96□□□□□ -0.17
CLNS1A-204ENST00000525428 RARSP54136 660 aaKnown RBP13.96□□□□□ -0.17
CLNS1A-204ENST00000525428 BAG4O95429 457 aaKnown RBP13.96□□□□□ -0.17
CLNS1A-204ENST00000525428 TMEM132EQ6IEE7 984 aa13.96□□□□□ -0.17
CLNS1A-204ENST00000525428 CIZ1Q9ULV3 898 aaPredicted RBP13.95□□□□□ -0.18
CLNS1A-204ENST00000525428 ATP2B3Q16720 1220 aa13.95□□□□□ -0.18
CLNS1A-204ENST00000525428 GAS2L2Q8NHY3 880 aa13.95□□□□□ -0.18
CLNS1A-204ENST00000525428 WWC1Q8IX03 1113 aa13.95□□□□□ -0.18
CLNS1A-204ENST00000525428 PRAG1Q86YV5 1406 aa13.94□□□□□ -0.18
CLNS1A-204ENST00000525428 RNF17Q9BXT8 1623 aaKnown RBP13.94□□□□□ -0.18
CLNS1A-204ENST00000525428 HS1BP3Q53T59 392 aa13.94□□□□□ -0.18
CLNS1A-204ENST00000525428 FTSJ3Q8IY81 847 aaKnown RBP13.94□□□□□ -0.18
CLNS1A-204ENST00000525428 TRPM2O94759 1503 aa13.93□□□□□ -0.18
CLNS1A-204ENST00000525428 PTMSP20962 102 aa13.93□□□□□ -0.18
CLNS1A-204ENST00000525428 AEBP2Q6ZN18 517 aaPredicted RBP13.93□□□□□ -0.18
CLNS1A-204ENST00000525428 CHAMP1Q96JM3 812 aa13.93□□□□□ -0.18
CLNS1A-204ENST00000525428 ZMYM3Q14202 1370 aa13.93□□□□□ -0.18
CLNS1A-204ENST00000525428 SNX21Q969T3 373 aa13.92□□□□□ -0.18
CLNS1A-204ENST00000525428 CGNQ9P2M7 1197 aaKnown RBP13.92□□□□□ -0.18
CLNS1A-204ENST00000525428 ZNF710Q8N1W2 664 aa13.92□□□□□ -0.18
CLNS1A-204ENST00000525428 LNPKQ9C0E8 428 aa13.92□□□□□ -0.18
CLNS1A-204ENST00000525428 TMEM51Q9NW97 253 aa13.92□□□□□ -0.18
CLNS1A-204ENST00000525428 NCOA3Q9Y6Q9 1424 aa13.92□□□□□ -0.18
CLNS1A-204ENST00000525428 PRPF40AO75400 957 aaKnown RBP13.92□□□□□ -0.18
CLNS1A-204ENST00000525428 NOS1P29475 1434 aa13.92□□□□□ -0.18
CLNS1A-204ENST00000525428 SPHKAPQ2M3C7 1700 aa13.92□□□□□ -0.18
CLNS1A-204ENST00000525428 PDLIM2Q96JY6 352 aa13.92□□□□□ -0.18
CLNS1A-204ENST00000525428 ZNF830Q96NB3 372 aaPredicted RBP13.92□□□□□ -0.18
CLNS1A-204ENST00000525428 K7ELQ4 463 aaPredicted RBP13.91□□□□□ -0.18
CLNS1A-204ENST00000525428 SYCE3A1L190 88 aa13.91□□□□□ -0.18
CLNS1A-204ENST00000525428 ZNF445P59923 1031 aa13.91□□□□□ -0.18
CLNS1A-204ENST00000525428 C17orf53Q8N3J3 647 aaPredicted RBP13.91□□□□□ -0.18
CLNS1A-204ENST00000525428 RBM25P49756 843 aaKnown RBP13.9□□□□□ -0.18
CLNS1A-204ENST00000525428 PKP1Q13835 747 aa13.9□□□□□ -0.18
CLNS1A-204ENST00000525428 FOXD4L5Q5VV16 416 aaPredicted RBP13.9□□□□□ -0.18
CLNS1A-204ENST00000525428 FOXD4L4Q8WXT5 416 aaPredicted RBP13.9□□□□□ -0.18
CLNS1A-204ENST00000525428 LMTK2Q8IWU2 1503 aa13.9□□□□□ -0.18
CLNS1A-204ENST00000525428 KIF20AO95235 890 aa13.9□□□□□ -0.18
CLNS1A-204ENST00000525428 GTPBP4Q9BZE4 634 aaKnown RBP13.9□□□□□ -0.18
CLNS1A-204ENST00000525428 CCDC39Q9UFE4 941 aa13.9□□□□□ -0.18
CLNS1A-204ENST00000525428 ARHGEF40Q8TER5 1519 aa13.9□□□□□ -0.19
CLNS1A-204ENST00000525428 SAFB2Q14151 953 aaKnown RBP eCLIP13.89□□□□□ -0.19
CLNS1A-204ENST00000525428 ITPRIPQ8IWB1 547 aa13.89□□□□□ -0.19
CLNS1A-204ENST00000525428 STK26Q9P289 416 aa13.89□□□□□ -0.19
CLNS1A-204ENST00000525428 TRAK1Q9UPV9 953 aa13.89□□□□□ -0.19
CLNS1A-204ENST00000525428 MVPQ14764 893 aaKnown RBP13.89□□□□□ -0.19
CLNS1A-204ENST00000525428 MYRIPQ8NFW9 859 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms