RNA–Protein interactions for RNA: ENST00000523276.1

SHPRH-210, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 2

Gene SHPRH, Length 2,030 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-210ENST00000523276 TNNT2P45379 298 aaPredicted RBP8.76□□□□□ -1.01
SHPRH-210ENST00000523276 SHPRHQ149N8 1683 aa8.76□□□□□ -1.01
SHPRH-210ENST00000523276 MINK1Q8N4C8 1332 aaPredicted RBP8.75□□□□□ -1.01
SHPRH-210ENST00000523276 ZMYM3Q14202 1370 aa8.75□□□□□ -1.01
SHPRH-210ENST00000523276 PLIN1O60240 522 aa8.75□□□□□ -1.01
SHPRH-210ENST00000523276 MTHFSP49914 203 aa8.75□□□□□ -1.01
SHPRH-210ENST00000523276 ESF1Q9H501 851 aaKnown RBP8.75□□□□□ -1.01
SHPRH-210ENST00000523276 CD163L1Q9NR16 1453 aa8.74□□□□□ -1.01
SHPRH-210ENST00000523276 E9PSI1 815 aa8.74□□□□□ -1.01
SHPRH-210ENST00000523276 C14orf37Q86TY3 774 aa8.74□□□□□ -1.01
SHPRH-210ENST00000523276 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.74□□□□□ -1.01
SHPRH-210ENST00000523276 CFAP53Q96M91 514 aa8.74□□□□□ -1.01
SHPRH-210ENST00000523276 TERF2IPQ9NYB0 399 aa8.74□□□□□ -1.01
SHPRH-210ENST00000523276 FANCIQ9NVI1 1328 aa8.74□□□□□ -1.01
SHPRH-210ENST00000523276 MED14O60244 1454 aa8.74□□□□□ -1.01
SHPRH-210ENST00000523276 IQSEC2Q5JU85 1478 aa8.74□□□□□ -1.01
SHPRH-210ENST00000523276 RGL2O15211 777 aa8.73□□□□□ -1.01
SHPRH-210ENST00000523276 CDK19Q9BWU1 502 aa8.73□□□□□ -1.01
SHPRH-210ENST00000523276 SETD1AO15047 1707 aaKnown RBP8.73□□□□□ -1.01
SHPRH-210ENST00000523276 NKTRP30414 1462 aaKnown RBP8.73□□□□□ -1.01
SHPRH-210ENST00000523276 TNRQ92752 1358 aa8.73□□□□□ -1.01
SHPRH-210ENST00000523276 RUNDC1Q96C34 613 aa8.73□□□□□ -1.01
SHPRH-210ENST00000523276 CRBNQ96SW2 442 aa8.73□□□□□ -1.01
SHPRH-210ENST00000523276 NLRP1Q9C000 1473 aa8.72□□□□□ -1.01
SHPRH-210ENST00000523276 NRXN3Q9Y4C0 1643 aa8.72□□□□□ -1.01
SHPRH-210ENST00000523276 HDGFL2Q7Z4V5 671 aaPredicted RBP8.71□□□□□ -1.01
SHPRH-210ENST00000523276 WWC1Q8IX03 1113 aa8.71□□□□□ -1.01
SHPRH-210ENST00000523276 FYB1O15117 783 aa8.71□□□□□ -1.02
SHPRH-210ENST00000523276 C20orf194Q5TEA3 1177 aa8.71□□□□□ -1.02
SHPRH-210ENST00000523276 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.71□□□□□ -1.02
SHPRH-210ENST00000523276 GGNBP2Q9H3C7 697 aa8.71□□□□□ -1.02
SHPRH-210ENST00000523276 METP08581 1390 aa8.71□□□□□ -1.02
SHPRH-210ENST00000523276 HDGFP51858 240 aaKnown RBP8.7□□□□□ -1.02
SHPRH-210ENST00000523276 WAPLQ7Z5K2 1190 aa8.7□□□□□ -1.02
SHPRH-210ENST00000523276 TCP11L2Q8N4U5 519 aa8.7□□□□□ -1.02
SHPRH-210ENST00000523276 CABP1Q9NZU7 370 aa8.7□□□□□ -1.02
SHPRH-210ENST00000523276 TECPR2O15040 1411 aa8.7□□□□□ -1.02
SHPRH-210ENST00000523276 COL3A1P02461 1466 aaPredicted RBP8.7□□□□□ -1.02
SHPRH-210ENST00000523276 ATP7BP35670 1465 aa8.7□□□□□ -1.02
SHPRH-210ENST00000523276 CCDC27Q2M243 656 aa8.7□□□□□ -1.02
SHPRH-210ENST00000523276 ERICH6Q7L0X2 663 aa8.7□□□□□ -1.02
SHPRH-210ENST00000523276 SIRT1Q96EB6 747 aa8.7□□□□□ -1.02
SHPRH-210ENST00000523276 TMEM2Q9UHN6 1383 aa8.69□□□□□ -1.02
SHPRH-210ENST00000523276 FAM135BQ49AJ0 1406 aa8.69□□□□□ -1.02
SHPRH-210ENST00000523276 ANKRD26Q9UPS8 1709 aa8.68□□□□□ -1.02
SHPRH-210ENST00000523276 WDR63Q8IWG1 891 aa8.68□□□□□ -1.02
SHPRH-210ENST00000523276 SPDYE1Q8NFV5 336 aaPredicted RBP8.68□□□□□ -1.02
SHPRH-210ENST00000523276 ADGRB2O60241 1585 aa8.68□□□□□ -1.02
SHPRH-210ENST00000523276 WASLO00401 505 aaPredicted RBP8.68□□□□□ -1.02
SHPRH-210ENST00000523276 U2AF1L5P0DN76 240 aaPredicted RBP8.68□□□□□ -1.02
SHPRH-210ENST00000523276 FXR2P51116 673 aaKnown RBP eCLIP8.68□□□□□ -1.02
SHPRH-210ENST00000523276 U2AF1Q01081 240 aaKnown RBP eCLIP8.68□□□□□ -1.02
SHPRH-210ENST00000523276 RRP7AQ9Y3A4 280 aaKnown RBP8.68□□□□□ -1.02
SHPRH-210ENST00000523276 TCERG1O14776 1098 aaKnown RBP8.67□□□□□ -1.02
SHPRH-210ENST00000523276 CPS1P31327 1500 aa8.67□□□□□ -1.02
SHPRH-210ENST00000523276 NEUROD2Q15784 382 aa8.67□□□□□ -1.02
SHPRH-210ENST00000523276 KNDC1Q76NI1 1749 aa8.67□□□□□ -1.02
SHPRH-210ENST00000523276 PNPLA6Q8IY17 1366 aa8.67□□□□□ -1.02
SHPRH-210ENST00000523276 PIP4P2Q8N4L2 257 aa8.67□□□□□ -1.02
SHPRH-210ENST00000523276 UBR1Q8IWV7 1749 aa8.67□□□□□ -1.02
SHPRH-210ENST00000523276 CPSF1Q10570 1443 aaKnown RBP8.66□□□□□ -1.02
SHPRH-210ENST00000523276 BCAR3O75815 825 aa8.66□□□□□ -1.02
SHPRH-210ENST00000523276 TXNDC2Q86VQ3 553 aa8.66□□□□□ -1.02
SHPRH-210ENST00000523276 EDC4Q6P2E9 1401 aaKnown RBP8.66□□□□□ -1.02
SHPRH-210ENST00000523276 PPIP5K1Q6PFW1 1433 aa8.66□□□□□ -1.02
SHPRH-210ENST00000523276 ADAMTS13Q76LX8 1427 aa8.66□□□□□ -1.02
SHPRH-210ENST00000523276 KDM2BQ8NHM5 1336 aa8.66□□□□□ -1.02
SHPRH-210ENST00000523276 PLEKHF1Q96S99 279 aa8.66□□□□□ -1.02
SHPRH-210ENST00000523276 PLEKHG1Q9ULL1 1385 aa8.65□□□□□ -1.02
SHPRH-210ENST00000523276 MS4A1P11836 297 aa8.65□□□□□ -1.02
SHPRH-210ENST00000523276 KLHL34Q8N239 644 aa8.65□□□□□ -1.02
SHPRH-210ENST00000523276 ANP32EQ9BTT0 268 aa8.65□□□□□ -1.02
SHPRH-210ENST00000523276 KIF20BQ96Q89 1820 aa8.65□□□□□ -1.03
SHPRH-210ENST00000523276 U2SURPO15042 1029 aaKnown RBP8.64□□□□□ -1.03
SHPRH-210ENST00000523276 DNAJC5Q9H3Z4 198 aa8.64□□□□□ -1.03
SHPRH-210ENST00000523276 CDC42BPGQ6DT37 1551 aa8.64□□□□□ -1.03
SHPRH-210ENST00000523276 DIAPH1O60610 1272 aaKnown RBP8.64□□□□□ -1.03
SHPRH-210ENST00000523276 PDE3AQ14432 1141 aa8.64□□□□□ -1.03
SHPRH-210ENST00000523276 CENPQQ7L2Z9 268 aaPredicted RBP8.64□□□□□ -1.03
SHPRH-210ENST00000523276 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.64□□□□□ -1.03
SHPRH-210ENST00000523276 NUDT16Q96DE0 195 aaKnown RBP8.64□□□□□ -1.03
SHPRH-210ENST00000523276 CLEC11AQ9Y240 323 aa8.64□□□□□ -1.03
SHPRH-210ENST00000523276 ROBO2Q9HCK4 1378 aa8.63□□□□□ -1.03
SHPRH-210ENST00000523276 LTKP29376 864 aa8.63□□□□□ -1.03
SHPRH-210ENST00000523276 RARSP54136 660 aaKnown RBP8.63□□□□□ -1.03
SHPRH-210ENST00000523276 MYT1Q01538 1121 aa8.63□□□□□ -1.03
SHPRH-210ENST00000523276 SPOCK2Q92563 424 aa8.63□□□□□ -1.03
SHPRH-210ENST00000523276 MYH16Q9H6N6 1097 aa8.63□□□□□ -1.03
SHPRH-210ENST00000523276 MAPK8IP3Q9UPT6 1336 aa8.63□□□□□ -1.03
SHPRH-210ENST00000523276 TMPOP42166 694 aaKnown RBP8.63□□□□□ -1.03
SHPRH-210ENST00000523276 POLKQ9UBT6 870 aa8.63□□□□□ -1.03
SHPRH-210ENST00000523276 CCDC61Q9Y6R9 512 aa8.63□□□□□ -1.03
SHPRH-210ENST00000523276 CEBPAP49715 358 aaPredicted RBP8.62□□□□□ -1.03
SHPRH-210ENST00000523276 PNNQ9H307 717 aaKnown RBP8.62□□□□□ -1.03
SHPRH-210ENST00000523276 SLIT1O75093 1534 aa8.62□□□□□ -1.03
SHPRH-210ENST00000523276 ARHGAP23Q9P227 1491 aa8.62□□□□□ -1.03
SHPRH-210ENST00000523276 PRR36Q9H6K5 1346 aa8.62□□□□□ -1.03
SHPRH-210ENST00000523276 NME9Q86XW9 330 aa8.61□□□□□ -1.03
SHPRH-210ENST00000523276 TRIM35Q9UPQ4 493 aa8.61□□□□□ -1.03
SHPRH-210ENST00000523276 AATKQ6ZMQ8 1374 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms