RNA–Protein interactions for RNA: ENST00000523215.1

ERGIC1-211, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 3,621 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-211ENST00000523215 DDIT3P35638 169 aa13.65□□□□□ -0.22
ERGIC1-211ENST00000523215 CARD14Q9BXL6 1004 aa13.65□□□□□ -0.22
ERGIC1-211ENST00000523215 C14orf93Q9H972 538 aaKnown RBP13.65□□□□□ -0.22
ERGIC1-211ENST00000523215 ADAMTS7Q9UKP4 1686 aa13.64□□□□□ -0.23
ERGIC1-211ENST00000523215 CC2D1BQ5T0F9 858 aaKnown RBP13.64□□□□□ -0.23
ERGIC1-211ENST00000523215 XRN1Q8IZH2 1706 aaKnown RBP13.64□□□□□ -0.23
ERGIC1-211ENST00000523215 MAP2P11137 1827 aaKnown RBP13.63□□□□□ -0.23
ERGIC1-211ENST00000523215 ADAMTS8Q9UP79 889 aa13.63□□□□□ -0.23
ERGIC1-211ENST00000523215 ANTXR1Q9H6X2 564 aa13.63□□□□□ -0.23
ERGIC1-211ENST00000523215 NPM1P06748 294 aaKnown RBP eCLIP13.62□□□□□ -0.23
ERGIC1-211ENST00000523215 KIF13AQ9H1H9 1805 aa13.62□□□□□ -0.23
ERGIC1-211ENST00000523215 PTCH1Q13635 1447 aa13.62□□□□□ -0.23
ERGIC1-211ENST00000523215 IL16Q14005 1332 aa13.62□□□□□ -0.23
ERGIC1-211ENST00000523215 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.61□□□□□ -0.23
ERGIC1-211ENST00000523215 YTHDC2Q9H6S0 1430 aaKnown RBP13.61□□□□□ -0.23
ERGIC1-211ENST00000523215 WDR63Q8IWG1 891 aa13.6□□□□□ -0.23
ERGIC1-211ENST00000523215 CGNL1Q0VF96 1302 aa13.6□□□□□ -0.23
ERGIC1-211ENST00000523215 DDRGK1Q96HY6 314 aa13.6□□□□□ -0.23
ERGIC1-211ENST00000523215 CACNA1FO60840 1977 aa13.6□□□□□ -0.23
ERGIC1-211ENST00000523215 CPSF1Q10570 1443 aaKnown RBP13.6□□□□□ -0.23
ERGIC1-211ENST00000523215 E9PSI1 815 aa13.59□□□□□ -0.23
ERGIC1-211ENST00000523215 PEAK1Q9H792 1746 aa13.59□□□□□ -0.23
ERGIC1-211ENST00000523215 ADGRF5Q8IZF2 1346 aa13.59□□□□□ -0.23
ERGIC1-211ENST00000523215 CYB5RLQ6IPT4 315 aa13.59□□□□□ -0.23
ERGIC1-211ENST00000523215 KIF24Q5T7B8 1368 aa13.58□□□□□ -0.23
ERGIC1-211ENST00000523215 CRBNQ96SW2 442 aa13.58□□□□□ -0.23
ERGIC1-211ENST00000523215 MED1Q15648 1581 aaPredicted RBP13.58□□□□□ -0.24
ERGIC1-211ENST00000523215 PLEKHF1Q96S99 279 aa13.58□□□□□ -0.24
ERGIC1-211ENST00000523215 PPM1GO15355 546 aaPredicted RBP13.58□□□□□ -0.24
ERGIC1-211ENST00000523215 FAM161AQ3B820 660 aa13.57□□□□□ -0.24
ERGIC1-211ENST00000523215 CHRM1P11229 460 aaPredicted RBP13.57□□□□□ -0.24
ERGIC1-211ENST00000523215 ANP32AP39687 249 aaKnown RBP13.56□□□□□ -0.24
ERGIC1-211ENST00000523215 NAP1L5Q96NT1 182 aaPredicted RBP13.56□□□□□ -0.24
ERGIC1-211ENST00000523215 GOLGA2Q08379 1002 aa13.56□□□□□ -0.24
ERGIC1-211ENST00000523215 SPINK5Q9NQ38 1064 aaPredicted RBP13.56□□□□□ -0.24
ERGIC1-211ENST00000523215 C20orf194Q5TEA3 1177 aa13.56□□□□□ -0.24
ERGIC1-211ENST00000523215 NSD3Q9BZ95 1437 aa13.54□□□□□ -0.24
ERGIC1-211ENST00000523215 SIPA1L3O60292 1781 aaPredicted RBP13.54□□□□□ -0.24
ERGIC1-211ENST00000523215 KIF3BO15066 747 aa13.54□□□□□ -0.24
ERGIC1-211ENST00000523215 MAPK8IP3Q9UPT6 1336 aa13.53□□□□□ -0.24
ERGIC1-211ENST00000523215 CFAP70Q5T0N1 1121 aa13.53□□□□□ -0.24
ERGIC1-211ENST00000523215 AATKQ6ZMQ8 1374 aa13.53□□□□□ -0.24
ERGIC1-211ENST00000523215 CENPJQ9HC77 1338 aaPredicted RBP13.52□□□□□ -0.25
ERGIC1-211ENST00000523215 CLEC17AQ6ZS10 378 aa13.52□□□□□ -0.25
ERGIC1-211ENST00000523215 IL17RAQ96F46 866 aa13.52□□□□□ -0.25
ERGIC1-211ENST00000523215 PLIN1O60240 522 aa13.51□□□□□ -0.25
ERGIC1-211ENST00000523215 CHD2O14647 1828 aaKnown RBP13.51□□□□□ -0.25
ERGIC1-211ENST00000523215 KDM3BQ7LBC6 1761 aa13.51□□□□□ -0.25
ERGIC1-211ENST00000523215 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.51□□□□□ -0.25
ERGIC1-211ENST00000523215 WWC1Q8IX03 1113 aa13.5□□□□□ -0.25
ERGIC1-211ENST00000523215 A2ML1A8K2U0 1454 aa13.5□□□□□ -0.25
ERGIC1-211ENST00000523215 KIF16BQ96L93 1317 aa13.49□□□□□ -0.25
ERGIC1-211ENST00000523215 HDAC1Q13547 482 aaPredicted RBP13.49□□□□□ -0.25
ERGIC1-211ENST00000523215 ZNF692Q9BU19 519 aaPredicted RBP13.49□□□□□ -0.25
ERGIC1-211ENST00000523215 ZBTB47Q9UFB7 747 aaPredicted RBP13.49□□□□□ -0.25
ERGIC1-211ENST00000523215 PIK3C2AO00443 1686 aa13.48□□□□□ -0.25
ERGIC1-211ENST00000523215 SSH2Q76I76 1423 aa13.48□□□□□ -0.25
ERGIC1-211ENST00000523215 FSD2A1L4K1 749 aa13.48□□□□□ -0.25
ERGIC1-211ENST00000523215 SKAP1Q86WV1 359 aa13.47□□□□□ -0.25
ERGIC1-211ENST00000523215 DMRT2Q9Y5R5 561 aa13.47□□□□□ -0.25
ERGIC1-211ENST00000523215 LMO7Q8WWI1 1683 aa13.47□□□□□ -0.25
ERGIC1-211ENST00000523215 SIRT1Q96EB6 747 aa13.46□□□□□ -0.25
ERGIC1-211ENST00000523215 NAP1L2Q9ULW6 460 aaPredicted RBP13.46□□□□□ -0.25
ERGIC1-211ENST00000523215 KNSTRNQ9Y448 316 aa13.46□□□□□ -0.25
ERGIC1-211ENST00000523215 RGS12O14924 1447 aa13.46□□□□□ -0.25
ERGIC1-211ENST00000523215 ABCC6O95255 1503 aa13.46□□□□□ -0.25
ERGIC1-211ENST00000523215 CEP170BQ9Y4F5 1589 aaPredicted RBP13.46□□□□□ -0.25
ERGIC1-211ENST00000523215 RARSP54136 660 aaKnown RBP13.46□□□□□ -0.25
ERGIC1-211ENST00000523215 ZNF142P52746 1687 aaPredicted RBP13.46□□□□□ -0.25
ERGIC1-211ENST00000523215 IBTKQ9P2D0 1353 aaPredicted RBP13.46□□□□□ -0.26
ERGIC1-211ENST00000523215 NWD1Q149M9 1564 aa13.45□□□□□ -0.26
ERGIC1-211ENST00000523215 TBC1D32Q96NH3 1257 aa13.45□□□□□ -0.26
ERGIC1-211ENST00000523215 SLIT1O75093 1534 aa13.45□□□□□ -0.26
ERGIC1-211ENST00000523215 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.44□□□□□ -0.26
ERGIC1-211ENST00000523215 A0A1W2PP64 1363 aa13.44□□□□□ -0.26
ERGIC1-211ENST00000523215 IGHDP01880 384 aa13.44□□□□□ -0.26
ERGIC1-211ENST00000523215 RUNDC1Q96C34 613 aa13.44□□□□□ -0.26
ERGIC1-211ENST00000523215 BRPF3Q9ULD4 1205 aa13.44□□□□□ -0.26
ERGIC1-211ENST00000523215 ATAD2Q6PL18 1390 aa13.43□□□□□ -0.26
ERGIC1-211ENST00000523215 DDX60Q8IY21 1712 aaKnown RBP13.43□□□□□ -0.26
ERGIC1-211ENST00000523215 ZNF428Q96B54 188 aa13.43□□□□□ -0.26
ERGIC1-211ENST00000523215 ZFP91Q96JP5 570 aaPredicted RBP13.42□□□□□ -0.26
ERGIC1-211ENST00000523215 COL22A1Q8NFW1 1626 aaPredicted RBP13.42□□□□□ -0.26
ERGIC1-211ENST00000523215 CLUAP1Q96AJ1 413 aa13.41□□□□□ -0.26
ERGIC1-211ENST00000523215 DNAJC5Q9H3Z4 198 aa13.41□□□□□ -0.26
ERGIC1-211ENST00000523215 SMC5Q8IY18 1101 aa13.41□□□□□ -0.26
ERGIC1-211ENST00000523215 ARHGAP23Q9P227 1491 aa13.4□□□□□ -0.26
ERGIC1-211ENST00000523215 RBM25P49756 843 aaKnown RBP13.4□□□□□ -0.26
ERGIC1-211ENST00000523215 TSPOAP1O95153 1857 aa13.4□□□□□ -0.26
ERGIC1-211ENST00000523215 NFKBIBQ15653 356 aa13.4□□□□□ -0.26
ERGIC1-211ENST00000523215 NCAPD2Q15021 1401 aa13.39□□□□□ -0.27
ERGIC1-211ENST00000523215 CCDC146Q8IYE0 955 aa13.39□□□□□ -0.27
ERGIC1-211ENST00000523215 PXDNLA1KZ92 1463 aa13.39□□□□□ -0.27
ERGIC1-211ENST00000523215 EDC4Q6P2E9 1401 aaKnown RBP13.39□□□□□ -0.27
ERGIC1-211ENST00000523215 GSE1Q14687 1217 aa13.39□□□□□ -0.27
ERGIC1-211ENST00000523215 SNX21Q969T3 373 aa13.39□□□□□ -0.27
ERGIC1-211ENST00000523215 CFAP44Q96MT7 982 aa13.39□□□□□ -0.27
ERGIC1-211ENST00000523215 OVOS2A0A0J9YW53 1432 aa13.38□□□□□ -0.27
ERGIC1-211ENST00000523215 OVOS2Q6IE36 1432 aa13.38□□□□□ -0.27
ERGIC1-211ENST00000523215 ZNF853P0CG23 659 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms