RNA–Protein interactions for RNA: ENST00000520096.5

LINC00535-203, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 790 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-203ENST00000520096 FOXC1Q12948 553 aa10.92□□□□□ -0.66
LINC00535-203ENST00000520096 FNBP4Q8N3X1 1017 aaPredicted RBP10.92□□□□□ -0.66
LINC00535-203ENST00000520096 ARXQ96QS3 562 aa10.92□□□□□ -0.66
LINC00535-203ENST00000520096 SALL2Q9Y467 1007 aaPredicted RBP10.92□□□□□ -0.66
LINC00535-203ENST00000520096 CFAP99D6REC4 459 aa10.91□□□□□ -0.66
LINC00535-203ENST00000520096 APBB1O00213 710 aa10.91□□□□□ -0.66
LINC00535-203ENST00000520096 ST8SIA5O15466 376 aa10.91□□□□□ -0.66
LINC00535-203ENST00000520096 CTDSPL2Q05D32 466 aa10.91□□□□□ -0.66
LINC00535-203ENST00000520096 BRICD5Q6PL45 260 aa10.91□□□□□ -0.66
LINC00535-203ENST00000520096 RNF19BQ6ZMZ0 732 aa10.91□□□□□ -0.66
LINC00535-203ENST00000520096 TSC1Q92574 1164 aa10.9□□□□□ -0.66
LINC00535-203ENST00000520096 AAASQ9NRG9 546 aa10.9□□□□□ -0.66
LINC00535-203ENST00000520096 GDPD2Q9HCC8 539 aa10.89□□□□□ -0.67
LINC00535-203ENST00000520096 SOCS7O14512 581 aa10.88□□□□□ -0.67
LINC00535-203ENST00000520096 MSS51Q4VC12 460 aa10.88□□□□□ -0.67
LINC00535-203ENST00000520096 HELBQ8NG08 1087 aaPredicted RBP10.87□□□□□ -0.67
LINC00535-203ENST00000520096 ARID3AQ99856 593 aa10.87□□□□□ -0.67
LINC00535-203ENST00000520096 HMX1Q9NP08 348 aaPredicted RBP10.87□□□□□ -0.67
LINC00535-203ENST00000520096 TOR4AQ9NXH8 423 aa10.87□□□□□ -0.67
LINC00535-203ENST00000520096 PRR7Q8TB68 274 aa10.86□□□□□ -0.67
LINC00535-203ENST00000520096 LRRN4Q8WUT4 740 aa10.86□□□□□ -0.67
LINC00535-203ENST00000520096 GJD4Q96KN9 370 aaPredicted RBP10.86□□□□□ -0.67
LINC00535-203ENST00000520096 ZNF777Q9ULD5 760 aaPredicted RBP10.86□□□□□ -0.67
LINC00535-203ENST00000520096 TBC1D2BQ9UPU7 963 aa10.86□□□□□ -0.67
LINC00535-203ENST00000520096 CD2BP2O95400 341 aaKnown RBP10.85□□□□□ -0.67
LINC00535-203ENST00000520096 AVPP01185 164 aa10.84□□□□□ -0.67
LINC00535-203ENST00000520096 ABL2P42684 1182 aa10.84□□□□□ -0.67
LINC00535-203ENST00000520096 RETREG3Q86VR2 466 aa10.84□□□□□ -0.67
LINC00535-203ENST00000520096 CRIPAKQ8N1N5 446 aa10.84□□□□□ -0.67
LINC00535-203ENST00000520096 Q3C1V9 767 aa10.83□□□□□ -0.68
LINC00535-203ENST00000520096 TRIM34Q9BYJ4 488 aa10.83□□□□□ -0.68
LINC00535-203ENST00000520096 HOMEZQ8IX15 550 aa10.82□□□□□ -0.68
LINC00535-203ENST00000520096 DACH1Q9UI36 760 aa10.82□□□□□ -0.68
LINC00535-203ENST00000520096 PER1O15534 1290 aaPredicted RBP10.81□□□□□ -0.68
LINC00535-203ENST00000520096 MMP16P51512 607 aa10.81□□□□□ -0.68
LINC00535-203ENST00000520096 CYP4X1Q8N118 509 aa10.81□□□□□ -0.68
LINC00535-203ENST00000520096 PRM3Q9NNZ6 103 aa10.81□□□□□ -0.68
LINC00535-203ENST00000520096 ZNF330Q9Y3S2 320 aaPredicted RBP10.81□□□□□ -0.68
LINC00535-203ENST00000520096 CCDC82Q8N4S0 544 aa10.8□□□□□ -0.68
LINC00535-203ENST00000520096 EPS8L1Q8TE68 723 aa10.8□□□□□ -0.68
LINC00535-203ENST00000520096 NDUFB9Q9Y6M9 179 aa10.8□□□□□ -0.68
LINC00535-203ENST00000520096 ZBTB24O43167 697 aaPredicted RBP10.79□□□□□ -0.68
LINC00535-203ENST00000520096 GPR37L1O60883 481 aa10.78□□□□□ -0.68
LINC00535-203ENST00000520096 USB1Q9BQ65 265 aaKnown RBP10.78□□□□□ -0.68
LINC00535-203ENST00000520096 IRF5Q13568 498 aa10.77□□□□□ -0.69
LINC00535-203ENST00000520096 WNT7AO00755 349 aa10.76□□□□□ -0.69
LINC00535-203ENST00000520096 TRIM32Q13049 653 aa10.76□□□□□ -0.69
LINC00535-203ENST00000520096 LCE2AQ5TA79 106 aaPredicted RBP10.76□□□□□ -0.69
LINC00535-203ENST00000520096 DESI1Q6ICB0 168 aa10.76□□□□□ -0.69
LINC00535-203ENST00000520096 POM121CA8CG34 1229 aa10.75□□□□□ -0.69
LINC00535-203ENST00000520096 AXIN1O15169 862 aa10.75□□□□□ -0.69
LINC00535-203ENST00000520096 DXOO77932 396 aaKnown RBP10.75□□□□□ -0.69
LINC00535-203ENST00000520096 SMCPP49901 116 aaPredicted RBP10.75□□□□□ -0.69
LINC00535-203ENST00000520096 NR6A1Q15406 480 aa10.75□□□□□ -0.69
LINC00535-203ENST00000520096 CTC1Q2NKJ3 1217 aa10.75□□□□□ -0.69
LINC00535-203ENST00000520096 WWC1Q8IX03 1113 aa10.75□□□□□ -0.69
LINC00535-203ENST00000520096 GMPR2Q9P2T1 348 aaKnown RBP10.75□□□□□ -0.69
LINC00535-203ENST00000520096 LYPD8Q6UX82 237 aa10.74□□□□□ -0.69
LINC00535-203ENST00000520096 TTC24A2A3L6 582 aaPredicted RBP10.73□□□□□ -0.69
LINC00535-203ENST00000520096 SMPD1P17405 629 aa10.72□□□□□ -0.69
LINC00535-203ENST00000520096 TREML4Q6UXN2 200 aa10.72□□□□□ -0.69
LINC00535-203ENST00000520096 MRGPRX2Q96LB1 330 aa10.72□□□□□ -0.69
LINC00535-203ENST00000520096 SNIP1Q8TAD8 396 aaKnown RBP10.71□□□□□ -0.69
LINC00535-203ENST00000520096 JUNDP17535 347 aa10.7□□□□□ -0.7
LINC00535-203ENST00000520096 CCDC97Q96F63 343 aaPredicted RBP10.69□□□□□ -0.7
LINC00535-203ENST00000520096 J3QL48 77 aa10.68□□□□□ -0.7
LINC00535-203ENST00000520096 VAC14Q08AM6 782 aa10.68□□□□□ -0.7
LINC00535-203ENST00000520096 GLMNQ92990 594 aa10.68□□□□□ -0.7
LINC00535-203ENST00000520096 SERPINA10Q9UK55 444 aa10.68□□□□□ -0.7
LINC00535-203ENST00000520096 C11orf95C9JLR9 678 aaPredicted RBP10.67□□□□□ -0.7
LINC00535-203ENST00000520096 F12P00748 615 aaPredicted RBP10.67□□□□□ -0.7
LINC00535-203ENST00000520096 SKOR1P84550 965 aa10.67□□□□□ -0.7
LINC00535-203ENST00000520096 WASHC4Q2M389 1173 aa10.67□□□□□ -0.7
LINC00535-203ENST00000520096 CCDC24Q8N4L8 307 aa10.67□□□□□ -0.7
LINC00535-203ENST00000520096 CALR3Q96L12 384 aaKnown RBP10.67□□□□□ -0.7
LINC00535-203ENST00000520096 PTPRNQ16849 979 aa10.66□□□□□ -0.7
LINC00535-203ENST00000520096 ADAMTS19Q8TE59 1207 aa10.66□□□□□ -0.7
LINC00535-203ENST00000520096 MAP10Q9P2G4 905 aa10.66□□□□□ -0.7
LINC00535-203ENST00000520096 RC3H1Q5TC82 1133 aaKnown RBP10.64□□□□□ -0.71
LINC00535-203ENST00000520096 ATP13A2Q9NQ11 1180 aa10.64□□□□□ -0.71
LINC00535-203ENST00000520096 HDGFL1Q5TGJ6 251 aa10.63□□□□□ -0.71
LINC00535-203ENST00000520096 HPS1Q92902 700 aa10.63□□□□□ -0.71
LINC00535-203ENST00000520096 CCNYL3P0C7X3 344 aa10.62□□□□□ -0.71
LINC00535-203ENST00000520096 CTHP32929 405 aa10.62□□□□□ -0.71
LINC00535-203ENST00000520096 WNT7BP56706 349 aa10.62□□□□□ -0.71
LINC00535-203ENST00000520096 NUDT12Q9BQG2 462 aa10.61□□□□□ -0.71
LINC00535-203ENST00000520096 FKBPLQ9UIM3 349 aa10.61□□□□□ -0.71
LINC00535-203ENST00000520096 WFS1O76024 890 aa10.6□□□□□ -0.71
LINC00535-203ENST00000520096 SNRPBP14678 240 aaKnown RBP10.6□□□□□ -0.71
LINC00535-203ENST00000520096 NFX1Q12986 1120 aaKnown RBP10.6□□□□□ -0.71
LINC00535-203ENST00000520096 PNMA1Q8ND90 353 aa10.6□□□□□ -0.71
LINC00535-203ENST00000520096 EVA1BQ9NVM1 165 aa10.6□□□□□ -0.71
LINC00535-203ENST00000520096 PTCRAQ6ISU1 281 aaPredicted RBP10.59□□□□□ -0.71
LINC00535-203ENST00000520096 ALG2Q9H553 416 aa10.59□□□□□ -0.71
LINC00535-203ENST00000520096 KCNH2Q12809 1159 aa10.58□□□□□ -0.72
LINC00535-203ENST00000520096 TRIM47Q96LD4 638 aa10.58□□□□□ -0.72
LINC00535-203ENST00000520096 FBXO45P0C2W1 286 aa10.57□□□□□ -0.72
LINC00535-203ENST00000520096 NR1H3Q13133 447 aa10.56□□□□□ -0.72
LINC00535-203ENST00000520096 ZBBXA8MT70 800 aa10.55□□□□□ -0.72
LINC00535-203ENST00000520096 SIAH2O43255 324 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms