RNA–Protein interactions for RNA: ENST00000519480.5

MCPH1-203, Transcript of microcephalin 1, humanhuman

TSL 1 (best) BASIC

Gene MCPH1, Length 2,917 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-203ENST00000519480 IQSEC2Q5JU85 1478 aa13.42□□□□□ -0.26
MCPH1-203ENST00000519480 NPC1L1Q9UHC9 1359 aa13.42□□□□□ -0.26
MCPH1-203ENST00000519480 NALCNQ8IZF0 1738 aa13.42□□□□□ -0.26
MCPH1-203ENST00000519480 NKTRP30414 1462 aaKnown RBP13.41□□□□□ -0.26
MCPH1-203ENST00000519480 USP32Q8NFA0 1604 aa13.41□□□□□ -0.26
MCPH1-203ENST00000519480 ADGRB2O60241 1585 aa13.41□□□□□ -0.26
MCPH1-203ENST00000519480 SOX12O15370 315 aa13.4□□□□□ -0.26
MCPH1-203ENST00000519480 NGDNQ8NEJ9 315 aaKnown RBP13.4□□□□□ -0.26
MCPH1-203ENST00000519480 MTHFSP49914 203 aa13.4□□□□□ -0.27
MCPH1-203ENST00000519480 NWD1Q149M9 1564 aa13.39□□□□□ -0.27
MCPH1-203ENST00000519480 CPSF1Q10570 1443 aaKnown RBP13.39□□□□□ -0.27
MCPH1-203ENST00000519480 STRCP1A6NGW2 1772 aa13.39□□□□□ -0.27
MCPH1-203ENST00000519480 PPM1GO15355 546 aaPredicted RBP13.39□□□□□ -0.27
MCPH1-203ENST00000519480 ADAMTS8Q9UP79 889 aa13.39□□□□□ -0.27
MCPH1-203ENST00000519480 CDC42BPGQ6DT37 1551 aa13.38□□□□□ -0.27
MCPH1-203ENST00000519480 ITSN1Q15811 1721 aa13.38□□□□□ -0.27
MCPH1-203ENST00000519480 NUTM2GQ5VZR2 741 aa13.37□□□□□ -0.27
MCPH1-203ENST00000519480 ESCO1Q5FWF5 840 aa13.37□□□□□ -0.27
MCPH1-203ENST00000519480 CCDC146Q8IYE0 955 aa13.37□□□□□ -0.27
MCPH1-203ENST00000519480 BCL11BQ9C0K0 894 aaPredicted RBP13.37□□□□□ -0.27
MCPH1-203ENST00000519480 KIF20BQ96Q89 1820 aa13.37□□□□□ -0.27
MCPH1-203ENST00000519480 TOPAZ1Q8N9V7 1692 aa13.37□□□□□ -0.27
MCPH1-203ENST00000519480 XPCQ01831 940 aaPredicted RBP13.36□□□□□ -0.27
MCPH1-203ENST00000519480 WDR43Q15061 677 aaKnown RBP eCLIP13.36□□□□□ -0.27
MCPH1-203ENST00000519480 ZNF335Q9H4Z2 1342 aaPredicted RBP13.36□□□□□ -0.27
MCPH1-203ENST00000519480 PLEKHG3A1L390 1219 aa13.36□□□□□ -0.27
MCPH1-203ENST00000519480 ORAI2Q96SN7 254 aa13.36□□□□□ -0.27
MCPH1-203ENST00000519480 CHMP4AQ9BY43 222 aa13.36□□□□□ -0.27
MCPH1-203ENST00000519480 AKAP12Q02952 1782 aa13.36□□□□□ -0.27
MCPH1-203ENST00000519480 TMEM94Q12767 1356 aa13.35□□□□□ -0.27
MCPH1-203ENST00000519480 FMN2Q9NZ56 1722 aa13.35□□□□□ -0.27
MCPH1-203ENST00000519480 ADGRL3Q9HAR2 1447 aa13.35□□□□□ -0.27
MCPH1-203ENST00000519480 PAK3O75914 559 aaPredicted RBP13.35□□□□□ -0.27
MCPH1-203ENST00000519480 DHX37Q8IY37 1157 aaKnown RBP13.35□□□□□ -0.27
MCPH1-203ENST00000519480 EDC4Q6P2E9 1401 aaKnown RBP13.35□□□□□ -0.27
MCPH1-203ENST00000519480 TTC21BQ7Z4L5 1316 aa13.35□□□□□ -0.27
MCPH1-203ENST00000519480 MON2Q7Z3U7 1717 aa13.34□□□□□ -0.27
MCPH1-203ENST00000519480 NSD2O96028 1365 aa13.34□□□□□ -0.27
MCPH1-203ENST00000519480 ZNF692Q9BU19 519 aaPredicted RBP13.34□□□□□ -0.27
MCPH1-203ENST00000519480 NEFLP07196 543 aa13.33□□□□□ -0.27
MCPH1-203ENST00000519480 RRS1Q15050 365 aaKnown RBP13.33□□□□□ -0.27
MCPH1-203ENST00000519480 USP6P35125 1406 aa13.33□□□□□ -0.28
MCPH1-203ENST00000519480 HAP1P54257 671 aaPredicted RBP13.33□□□□□ -0.28
MCPH1-203ENST00000519480 PHF8Q9UPP1 1060 aa13.33□□□□□ -0.28
MCPH1-203ENST00000519480 GTF3C3Q9Y5Q9 886 aa13.33□□□□□ -0.28
MCPH1-203ENST00000519480 COG3Q96JB2 828 aa13.33□□□□□ -0.28
MCPH1-203ENST00000519480 EMILIN1Q9Y6C2 1016 aa13.33□□□□□ -0.28
MCPH1-203ENST00000519480 FOXO3O43524 673 aa13.32□□□□□ -0.28
MCPH1-203ENST00000519480 DDX17Q92841 729 aaKnown RBP13.32□□□□□ -0.28
MCPH1-203ENST00000519480 ANKRD26Q9UPS8 1709 aa13.32□□□□□ -0.28
MCPH1-203ENST00000519480 MAP2P11137 1827 aaKnown RBP13.31□□□□□ -0.28
MCPH1-203ENST00000519480 C19orf44Q9H6X5 657 aa13.3□□□□□ -0.28
MCPH1-203ENST00000519480 ZBED9Q6R2W3 1325 aa13.3□□□□□ -0.28
MCPH1-203ENST00000519480 U2SURPO15042 1029 aaKnown RBP13.3□□□□□ -0.28
MCPH1-203ENST00000519480 POLKQ9UBT6 870 aa13.3□□□□□ -0.28
MCPH1-203ENST00000519480 ANKARQ7Z5J8 1434 aa13.3□□□□□ -0.28
MCPH1-203ENST00000519480 ATF3P18847 181 aa13.29□□□□□ -0.28
MCPH1-203ENST00000519480 LTBP4Q8N2S1 1624 aa13.29□□□□□ -0.28
MCPH1-203ENST00000519480 PSME1Q06323 249 aa13.29□□□□□ -0.28
MCPH1-203ENST00000519480 LMOD2Q6P5Q4 547 aa13.29□□□□□ -0.28
MCPH1-203ENST00000519480 CFAP53Q96M91 514 aa13.29□□□□□ -0.28
MCPH1-203ENST00000519480 DMRT2Q9Y5R5 561 aa13.29□□□□□ -0.28
MCPH1-203ENST00000519480 POLR3AO14802 1390 aaPredicted RBP13.29□□□□□ -0.28
MCPH1-203ENST00000519480 NRKQ7Z2Y5 1582 aa13.29□□□□□ -0.28
MCPH1-203ENST00000519480 NLRP6P59044 892 aa13.28□□□□□ -0.28
MCPH1-203ENST00000519480 U2AF1L5P0DN76 240 aaPredicted RBP13.28□□□□□ -0.28
MCPH1-203ENST00000519480 U2AF1Q01081 240 aaKnown RBP eCLIP13.28□□□□□ -0.28
MCPH1-203ENST00000519480 ABTB2Q8N961 1025 aa13.28□□□□□ -0.28
MCPH1-203ENST00000519480 NEUROD2Q15784 382 aa13.27□□□□□ -0.28
MCPH1-203ENST00000519480 SHPRHQ149N8 1683 aa13.27□□□□□ -0.28
MCPH1-203ENST00000519480 RRP7AQ9Y3A4 280 aaKnown RBP13.27□□□□□ -0.29
MCPH1-203ENST00000519480 APAF1O14727 1248 aa13.26□□□□□ -0.29
MCPH1-203ENST00000519480 SSH2Q76I76 1423 aa13.26□□□□□ -0.29
MCPH1-203ENST00000519480 BLMP54132 1417 aaPredicted RBP13.26□□□□□ -0.29
MCPH1-203ENST00000519480 XIRP1Q702N8 1843 aaKnown RBP13.26□□□□□ -0.29
MCPH1-203ENST00000519480 CDCA7LQ96GN5 454 aa13.26□□□□□ -0.29
MCPH1-203ENST00000519480 ZBTB7CA1YPR0 619 aa13.25□□□□□ -0.29
MCPH1-203ENST00000519480 SAMD1Q6SPF0 538 aaPredicted RBP13.25□□□□□ -0.29
MCPH1-203ENST00000519480 C1orf167Q5SNV9 1468 aa13.25□□□□□ -0.29
MCPH1-203ENST00000519480 PIK3C2AO00443 1686 aa13.25□□□□□ -0.29
MCPH1-203ENST00000519480 ADRA2BP18089 450 aa13.24□□□□□ -0.29
MCPH1-203ENST00000519480 FGD1P98174 961 aa13.24□□□□□ -0.29
MCPH1-203ENST00000519480 MSH6P52701 1360 aa13.24□□□□□ -0.29
MCPH1-203ENST00000519480 OVOS2A0A0J9YW53 1432 aa13.24□□□□□ -0.29
MCPH1-203ENST00000519480 OVOS2Q6IE36 1432 aa13.24□□□□□ -0.29
MCPH1-203ENST00000519480 DIAPH1O60610 1272 aaKnown RBP13.23□□□□□ -0.29
MCPH1-203ENST00000519480 TTC21AQ8NDW8 1320 aa13.23□□□□□ -0.29
MCPH1-203ENST00000519480 LRRC7Q96NW7 1537 aa13.23□□□□□ -0.29
MCPH1-203ENST00000519480 HMOX1P09601 288 aa13.23□□□□□ -0.29
MCPH1-203ENST00000519480 MST1RQ04912 1400 aa13.23□□□□□ -0.29
MCPH1-203ENST00000519480 COL3A1P02461 1466 aaPredicted RBP13.22□□□□□ -0.29
MCPH1-203ENST00000519480 HSP90AB2PQ58FF8 381 aa13.22□□□□□ -0.29
MCPH1-203ENST00000519480 KRT28Q7Z3Y7 464 aa13.22□□□□□ -0.29
MCPH1-203ENST00000519480 SUPT16HQ9Y5B9 1047 aaKnown RBP13.22□□□□□ -0.29
MCPH1-203ENST00000519480 CADPS2Q86UW7 1296 aa13.22□□□□□ -0.29
MCPH1-203ENST00000519480 IRX6P78412 446 aaPredicted RBP13.21□□□□□ -0.29
MCPH1-203ENST00000519480 MAP3K19Q56UN5 1328 aa13.21□□□□□ -0.29
MCPH1-203ENST00000519480 NUDCQ9Y266 331 aa13.21□□□□□ -0.3
MCPH1-203ENST00000519480 NCOA3Q9Y6Q9 1424 aa13.21□□□□□ -0.3
MCPH1-203ENST00000519480 TAF7LQ5H9L4 462 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms