RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 RBM10P98175 930 aaKnown RBP8.14□□□□□ -1.11
CPNE3-203ENST00000517490 RTF1Q92541 710 aaKnown RBP8.14□□□□□ -1.11
CPNE3-203ENST00000517490 BMP2KLQ5H9B9 411 aa8.14□□□□□ -1.11
CPNE3-203ENST00000517490 SSH1Q8WYL5 1049 aa8.14□□□□□ -1.11
CPNE3-203ENST00000517490 ZMYND15Q9H091 742 aa8.14□□□□□ -1.11
CPNE3-203ENST00000517490 SPINK5Q9NQ38 1064 aaPredicted RBP8.14□□□□□ -1.11
CPNE3-203ENST00000517490 NRDCO43847 1150 aa8.13□□□□□ -1.11
CPNE3-203ENST00000517490 KCNJ4P48050 445 aa8.13□□□□□ -1.11
CPNE3-203ENST00000517490 HMGN5P82970 282 aaKnown RBP8.13□□□□□ -1.11
CPNE3-203ENST00000517490 ALDH1L2Q3SY69 923 aa8.13□□□□□ -1.11
CPNE3-203ENST00000517490 NOL8Q76FK4 1167 aaKnown RBP8.13□□□□□ -1.11
CPNE3-203ENST00000517490 POLR1AO95602 1720 aaPredicted RBP8.13□□□□□ -1.11
CPNE3-203ENST00000517490 TRIM27P14373 513 aa8.13□□□□□ -1.11
CPNE3-203ENST00000517490 TMPOP42166 694 aaKnown RBP8.13□□□□□ -1.11
CPNE3-203ENST00000517490 KLHL40Q2TBA0 621 aa8.13□□□□□ -1.11
CPNE3-203ENST00000517490 GGNBP2Q9H3C7 697 aa8.13□□□□□ -1.11
CPNE3-203ENST00000517490 ZNF521Q96K83 1311 aa8.13□□□□□ -1.11
CPNE3-203ENST00000517490 OS9Q13438 667 aaPredicted RBP8.13□□□□□ -1.11
CPNE3-203ENST00000517490 SMC5Q8IY18 1101 aa8.13□□□□□ -1.11
CPNE3-203ENST00000517490 TRMT2AQ8IZ69 625 aaKnown RBP8.13□□□□□ -1.11
CPNE3-203ENST00000517490 UQCRHLA0A096LP55 91 aa8.13□□□□□ -1.11
CPNE3-203ENST00000517490 UQCRHP07919 91 aa8.13□□□□□ -1.11
CPNE3-203ENST00000517490 STK31Q9BXU1 1019 aa8.13□□□□□ -1.11
CPNE3-203ENST00000517490 TSPY26PQ9H489 355 aa8.13□□□□□ -1.11
CPNE3-203ENST00000517490 DISP1Q96F81 1524 aa8.13□□□□□ -1.11
CPNE3-203ENST00000517490 SSFA2P28290 1259 aa8.12□□□□□ -1.11
CPNE3-203ENST00000517490 MCM5P33992 734 aa8.12□□□□□ -1.11
CPNE3-203ENST00000517490 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.12□□□□□ -1.11
CPNE3-203ENST00000517490 AFAP1Q8N556 730 aa8.12□□□□□ -1.11
CPNE3-203ENST00000517490 PDIA4P13667 645 aaKnown RBP8.12□□□□□ -1.11
CPNE3-203ENST00000517490 NUTM2DQ5VT03 806 aaPredicted RBP8.12□□□□□ -1.11
CPNE3-203ENST00000517490 CABP2Q9NPB3 220 aa8.12□□□□□ -1.11
CPNE3-203ENST00000517490 ATP10BO94823 1461 aa8.11□□□□□ -1.11
CPNE3-203ENST00000517490 HTATSF1O43719 755 aaKnown RBP8.11□□□□□ -1.11
CPNE3-203ENST00000517490 LETM1O95202 739 aaPredicted RBP8.11□□□□□ -1.11
CPNE3-203ENST00000517490 RLBP1P12271 317 aa8.11□□□□□ -1.11
CPNE3-203ENST00000517490 TMEM132EQ6IEE7 984 aa8.11□□□□□ -1.11
CPNE3-203ENST00000517490 RNF214Q8ND24 703 aa8.11□□□□□ -1.11
CPNE3-203ENST00000517490 NSD2O96028 1365 aa8.11□□□□□ -1.11
CPNE3-203ENST00000517490 IL16Q14005 1332 aa8.11□□□□□ -1.11
CPNE3-203ENST00000517490 TPM3P06753 285 aa8.11□□□□□ -1.11
CPNE3-203ENST00000517490 NUCB1Q02818 461 aa8.11□□□□□ -1.11
CPNE3-203ENST00000517490 RAB3GAP1Q15042 981 aa8.11□□□□□ -1.11
CPNE3-203ENST00000517490 SLC4A10Q6U841 1118 aa8.11□□□□□ -1.11
CPNE3-203ENST00000517490 C1orf115Q9H7X2 142 aa8.11□□□□□ -1.11
CPNE3-203ENST00000517490 DUOX2Q9NRD8 1548 aa8.11□□□□□ -1.11
CPNE3-203ENST00000517490 DIAPH3Q9NSV4 1193 aa8.11□□□□□ -1.11
CPNE3-203ENST00000517490 BAG4O95429 457 aaKnown RBP8.11□□□□□ -1.11
CPNE3-203ENST00000517490 FSD2A1L4K1 749 aa8.1□□□□□ -1.11
CPNE3-203ENST00000517490 RILPL2Q969X0 211 aa8.1□□□□□ -1.11
CPNE3-203ENST00000517490 ABCC2Q92887 1545 aa8.1□□□□□ -1.11
CPNE3-203ENST00000517490 HS1BP3Q53T59 392 aa8.1□□□□□ -1.11
CPNE3-203ENST00000517490 ZNF608Q9ULD9 1512 aaPredicted RBP8.1□□□□□ -1.11
CPNE3-203ENST00000517490 MINK1Q8N4C8 1332 aaPredicted RBP8.1□□□□□ -1.11
CPNE3-203ENST00000517490 RPGRIP1LQ68CZ1 1315 aa8.1□□□□□ -1.11
CPNE3-203ENST00000517490 PRKAR2BP31323 418 aa8.09□□□□□ -1.11
CPNE3-203ENST00000517490 TWISTNBQ3B726 338 aaPredicted RBP8.09□□□□□ -1.11
CPNE3-203ENST00000517490 ANTXR1Q9H6X2 564 aa8.09□□□□□ -1.11
CPNE3-203ENST00000517490 ERC2O15083 957 aa8.09□□□□□ -1.11
CPNE3-203ENST00000517490 FCHSD2O94868 740 aa8.09□□□□□ -1.11
CPNE3-203ENST00000517490 RBM25P49756 843 aaKnown RBP8.09□□□□□ -1.11
CPNE3-203ENST00000517490 NEK4P51957 841 aa8.09□□□□□ -1.11
CPNE3-203ENST00000517490 CEP170Q5SW79 1584 aa8.09□□□□□ -1.11
CPNE3-203ENST00000517490 SASS6Q6UVJ0 657 aa8.09□□□□□ -1.11
CPNE3-203ENST00000517490 ANO2Q9NQ90 1003 aa8.09□□□□□ -1.11
CPNE3-203ENST00000517490 FOXD4L6Q3SYB3 417 aaPredicted RBP8.09□□□□□ -1.11
CPNE3-203ENST00000517490 FOXD4L3Q6VB84 417 aaPredicted RBP8.09□□□□□ -1.11
CPNE3-203ENST00000517490 TBC1D9Q6ZT07 1266 aa8.09□□□□□ -1.11
CPNE3-203ENST00000517490 OFD1O75665 1012 aa8.09□□□□□ -1.11
CPNE3-203ENST00000517490 FAM184AQ8NB25 1140 aa8.09□□□□□ -1.11
CPNE3-203ENST00000517490 KDM5DQ9BY66 1539 aa8.09□□□□□ -1.11
CPNE3-203ENST00000517490 CHMP4AQ9BY43 222 aa8.08□□□□□ -1.12
CPNE3-203ENST00000517490 TNNQ9UQP3 1299 aa8.08□□□□□ -1.12
CPNE3-203ENST00000517490 COG3Q96JB2 828 aa8.08□□□□□ -1.12
CPNE3-203ENST00000517490 ADGRF5Q8IZF2 1346 aa8.08□□□□□ -1.12
CPNE3-203ENST00000517490 DYNC1I1O14576 645 aa8.08□□□□□ -1.12
CPNE3-203ENST00000517490 HMOX1P09601 288 aa8.07□□□□□ -1.12
CPNE3-203ENST00000517490 FGD1P98174 961 aa8.07□□□□□ -1.12
CPNE3-203ENST00000517490 RPAP2Q8IXW5 612 aaPredicted RBP8.07□□□□□ -1.12
CPNE3-203ENST00000517490 GPATCH3Q96I76 525 aa8.07□□□□□ -1.12
CPNE3-203ENST00000517490 DMRT2Q9Y5R5 561 aa8.07□□□□□ -1.12
CPNE3-203ENST00000517490 MAGI2Q86UL8 1455 aa8.07□□□□□ -1.12
CPNE3-203ENST00000517490 SYCP2Q9BX26 1530 aa8.07□□□□□ -1.12
CPNE3-203ENST00000517490 ARHGEF5Q12774 1597 aa8.07□□□□□ -1.12
CPNE3-203ENST00000517490 ZSCAN23Q3MJ62 389 aa8.07□□□□□ -1.12
CPNE3-203ENST00000517490 PRDM15P57071 1507 aaPredicted RBP8.07□□□□□ -1.12
CPNE3-203ENST00000517490 WDR33Q9C0J8 1336 aaKnown RBP8.07□□□□□ -1.12
CPNE3-203ENST00000517490 SYCE3A1L190 88 aa8.07□□□□□ -1.12
CPNE3-203ENST00000517490 HDGFP51858 240 aaKnown RBP8.07□□□□□ -1.12
CPNE3-203ENST00000517490 TERF1P54274 439 aa8.07□□□□□ -1.12
CPNE3-203ENST00000517490 XPCQ01831 940 aaPredicted RBP8.07□□□□□ -1.12
CPNE3-203ENST00000517490 CARD14Q9BXL6 1004 aa8.07□□□□□ -1.12
CPNE3-203ENST00000517490 ATAD2Q6PL18 1390 aa8.06□□□□□ -1.12
CPNE3-203ENST00000517490 USP19O94966 1318 aa8.06□□□□□ -1.12
CPNE3-203ENST00000517490 SMC3Q9UQE7 1217 aa8.06□□□□□ -1.12
CPNE3-203ENST00000517490 NPM3O75607 178 aaKnown RBP8.06□□□□□ -1.12
CPNE3-203ENST00000517490 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.06□□□□□ -1.12
CPNE3-203ENST00000517490 HSP90B1P14625 803 aaKnown RBP8.06□□□□□ -1.12
CPNE3-203ENST00000517490 NFE2L2Q16236 605 aa8.06□□□□□ -1.12
CPNE3-203ENST00000517490 ARHGAP45Q92619 1136 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 182.8 ms