RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 ANKK1Q8NFD2 765 aa5.86□□□□□ -1.47
RNU6-840P-201ENST00000517275 GNEQ9Y223 722 aaKnown RBP5.86□□□□□ -1.47
RNU6-840P-201ENST00000517275 NR1I2O75469 434 aa5.85□□□□□ -1.47
RNU6-840P-201ENST00000517275 DXOO77932 396 aaKnown RBP5.85□□□□□ -1.47
RNU6-840P-201ENST00000517275 PUS10Q3MIT2 529 aaKnown RBP5.85□□□□□ -1.47
RNU6-840P-201ENST00000517275 KANK4Q5T7N3 995 aaPredicted RBP5.85□□□□□ -1.47
RNU6-840P-201ENST00000517275 B4GALNT3Q6L9W6 998 aa5.85□□□□□ -1.47
RNU6-840P-201ENST00000517275 TBC1D9Q6ZT07 1266 aa5.85□□□□□ -1.47
RNU6-840P-201ENST00000517275 FMNL1O95466 1100 aaPredicted RBP5.84□□□□□ -1.47
RNU6-840P-201ENST00000517275 RFX1P22670 979 aa5.84□□□□□ -1.47
RNU6-840P-201ENST00000517275 MMP16P51512 607 aa5.84□□□□□ -1.47
RNU6-840P-201ENST00000517275 APLP1P51693 650 aa5.84□□□□□ -1.47
RNU6-840P-201ENST00000517275 MFAP1P55081 439 aaKnown RBP5.84□□□□□ -1.47
RNU6-840P-201ENST00000517275 HS3ST6Q96QI5 342 aa5.84□□□□□ -1.47
RNU6-840P-201ENST00000517275 TSR3Q9UJK0 312 aaKnown RBP5.84□□□□□ -1.47
RNU6-840P-201ENST00000517275 CHIC2Q9UKJ5 165 aa5.84□□□□□ -1.47
RNU6-840P-201ENST00000517275 FAM196BA6NMK8 535 aa5.83□□□□□ -1.48
RNU6-840P-201ENST00000517275 LZTS3O60299 673 aaPredicted RBP5.83□□□□□ -1.48
RNU6-840P-201ENST00000517275 PDXDC2PQ6P474 469 aa5.83□□□□□ -1.48
RNU6-840P-201ENST00000517275 SCUBE3Q8IX30 993 aa5.83□□□□□ -1.48
RNU6-840P-201ENST00000517275 ARMC2Q8NEN0 867 aa5.83□□□□□ -1.48
RNU6-840P-201ENST00000517275 GZF1Q9H116 711 aaPredicted RBP5.83□□□□□ -1.48
RNU6-840P-201ENST00000517275 PCDHB3Q9Y5E6 796 aa5.83□□□□□ -1.48
RNU6-840P-201ENST00000517275 POTEB3A0JP26 581 aa5.82□□□□□ -1.48
RNU6-840P-201ENST00000517275 USP17L3A6NCW0 530 aa5.82□□□□□ -1.48
RNU6-840P-201ENST00000517275 USP17L4A6NCW7 530 aa5.82□□□□□ -1.48
RNU6-840P-201ENST00000517275 FAM205CA6NFA0 338 aa5.82□□□□□ -1.48
RNU6-840P-201ENST00000517275 USP17L5A8MUK1 530 aa5.82□□□□□ -1.48
RNU6-840P-201ENST00000517275 CCNYL3P0C7X3 344 aa5.82□□□□□ -1.48
RNU6-840P-201ENST00000517275 NBPF14Q5TI25 921 aa5.82□□□□□ -1.48
RNU6-840P-201ENST00000517275 USP17L2Q6R6M4 530 aa5.82□□□□□ -1.48
RNU6-840P-201ENST00000517275 POTEBQ6S5H4 581 aa5.82□□□□□ -1.48
RNU6-840P-201ENST00000517275 USP17L1Q7RTZ2 530 aa5.82□□□□□ -1.48
RNU6-840P-201ENST00000517275 MAP10Q9P2G4 905 aa5.82□□□□□ -1.48
RNU6-840P-201ENST00000517275 ZMIZ1Q9ULJ6 1067 aa5.82□□□□□ -1.48
RNU6-840P-201ENST00000517275 HPS5Q9UPZ3 1129 aa5.82□□□□□ -1.48
RNU6-840P-201ENST00000517275 PPP4CP60510 307 aa5.81□□□□□ -1.48
RNU6-840P-201ENST00000517275 NYAP1Q6ZVC0 841 aa5.81□□□□□ -1.48
RNU6-840P-201ENST00000517275 SND1Q7KZF4 910 aaKnown RBP eCLIP5.81□□□□□ -1.48
RNU6-840P-201ENST00000517275 MARVELD3Q96A59 401 aa5.81□□□□□ -1.48
RNU6-840P-201ENST00000517275 VRTNQ9H8Y1 702 aa5.81□□□□□ -1.48
RNU6-840P-201ENST00000517275 EVA1BQ9NVM1 165 aa5.81□□□□□ -1.48
RNU6-840P-201ENST00000517275 PIK3CDO00329 1044 aa5.8□□□□□ -1.48
RNU6-840P-201ENST00000517275 PTK2Q05397 1052 aa5.8□□□□□ -1.48
RNU6-840P-201ENST00000517275 LHX8Q68G74 356 aa5.8□□□□□ -1.48
RNU6-840P-201ENST00000517275 PHTF2Q8N3S3 785 aa5.8□□□□□ -1.48
RNU6-840P-201ENST00000517275 OCSTAMPQ9BR26 566 aa5.8□□□□□ -1.48
RNU6-840P-201ENST00000517275 KCNH2Q12809 1159 aa5.79□□□□□ -1.48
RNU6-840P-201ENST00000517275 FAM174AQ8TBP5 190 aa5.79□□□□□ -1.48
RNU6-840P-201ENST00000517275 NUDT12Q9BQG2 462 aa5.79□□□□□ -1.48
RNU6-840P-201ENST00000517275 AMOTL2Q9Y2J4 779 aa5.79□□□□□ -1.48
RNU6-840P-201ENST00000517275 IVNS1ABPQ9Y6Y0 642 aa5.79□□□□□ -1.48
RNU6-840P-201ENST00000517275 USP17L15C9J2P7 530 aa5.78□□□□□ -1.48
RNU6-840P-201ENST00000517275 USP17L10C9JJH3 530 aa5.78□□□□□ -1.48
RNU6-840P-201ENST00000517275 USP17L13C9JLJ4 530 aa5.78□□□□□ -1.48
RNU6-840P-201ENST00000517275 USP17L12C9JPN9 530 aa5.78□□□□□ -1.48
RNU6-840P-201ENST00000517275 USP17L11C9JVI0 530 aa5.78□□□□□ -1.48
RNU6-840P-201ENST00000517275 USP17L21D6R901 530 aa5.78□□□□□ -1.48
RNU6-840P-201ENST00000517275 USP17L18D6R9N7 530 aa5.78□□□□□ -1.48
RNU6-840P-201ENST00000517275 USP17L22D6RA61 530 aa5.78□□□□□ -1.48
RNU6-840P-201ENST00000517275 USP17L17D6RBQ6 530 aa5.78□□□□□ -1.48
RNU6-840P-201ENST00000517275 USP17L19D6RCP7 530 aa5.78□□□□□ -1.48
RNU6-840P-201ENST00000517275 USP17L20D6RJB6 530 aa5.78□□□□□ -1.48
RNU6-840P-201ENST00000517275 ATP5J2-PTCD1G3V325 749 aa5.78□□□□□ -1.48
RNU6-840P-201ENST00000517275 BCAMP50895 628 aa5.78□□□□□ -1.48
RNU6-840P-201ENST00000517275 USP17L24Q0WX57 530 aa5.78□□□□□ -1.48
RNU6-840P-201ENST00000517275 MAP7D1Q3KQU3 841 aa5.78□□□□□ -1.48
RNU6-840P-201ENST00000517275 TMEM164Q5U3C3 297 aa5.78□□□□□ -1.48
RNU6-840P-201ENST00000517275 SH3BP5LQ7L8J4 393 aa5.78□□□□□ -1.48
RNU6-840P-201ENST00000517275 TXNDC2Q86VQ3 553 aa5.78□□□□□ -1.48
RNU6-840P-201ENST00000517275 FAM160A2Q8N612 972 aaPredicted RBP5.78□□□□□ -1.48
RNU6-840P-201ENST00000517275 CLP1Q92989 425 aaKnown RBP5.78□□□□□ -1.48
RNU6-840P-201ENST00000517275 CEP126Q9P2H0 1117 aa5.78□□□□□ -1.48
RNU6-840P-201ENST00000517275 PTK7Q13308 1070 aa5.77□□□□□ -1.49
RNU6-840P-201ENST00000517275 SWI5Q1ZZU3 235 aa5.77□□□□□ -1.49
RNU6-840P-201ENST00000517275 LCE2DQ5TA82 110 aaPredicted RBP5.77□□□□□ -1.49
RNU6-840P-201ENST00000517275 SH3RF1Q7Z6J0 888 aa5.77□□□□□ -1.49
RNU6-840P-201ENST00000517275 STK32AQ8WU08 396 aa5.77□□□□□ -1.49
RNU6-840P-201ENST00000517275 WNT2BQ93097 391 aa5.77□□□□□ -1.49
RNU6-840P-201ENST00000517275 SPSB2Q99619 263 aa5.77□□□□□ -1.49
RNU6-840P-201ENST00000517275 MYT1LQ9UL68 1186 aa5.77□□□□□ -1.49
RNU6-840P-201ENST00000517275 NOVA2Q9UNW9 492 aaKnown RBP5.77□□□□□ -1.49
RNU6-840P-201ENST00000517275 MTMR7Q9Y216 660 aa5.77□□□□□ -1.49
RNU6-840P-201ENST00000517275 GOLGA8CPA6NN73 597 aa5.76□□□□□ -1.49
RNU6-840P-201ENST00000517275 ADH1BP00325 375 aa5.76□□□□□ -1.49
RNU6-840P-201ENST00000517275 SKIP12755 728 aa5.76□□□□□ -1.49
RNU6-840P-201ENST00000517275 FAM69CQ0P6D2 419 aa5.76□□□□□ -1.49
RNU6-840P-201ENST00000517275 TRAF7Q6Q0C0 670 aa5.76□□□□□ -1.49
RNU6-840P-201ENST00000517275 CTHP32929 405 aa5.75□□□□□ -1.49
RNU6-840P-201ENST00000517275 NCOA4Q13772 614 aa5.75□□□□□ -1.49
RNU6-840P-201ENST00000517275 CCDC27Q2M243 656 aa5.75□□□□□ -1.49
RNU6-840P-201ENST00000517275 SLFNL1Q499Z3 407 aa5.75□□□□□ -1.49
RNU6-840P-201ENST00000517275 CRTC2Q53ET0 693 aaPredicted RBP5.75□□□□□ -1.49
RNU6-840P-201ENST00000517275 PHLDB3Q6NSJ2 640 aa5.75□□□□□ -1.49
RNU6-840P-201ENST00000517275 THSD4Q6ZMP0 1018 aa5.75□□□□□ -1.49
RNU6-840P-201ENST00000517275 CCDC125Q86Z20 511 aa5.75□□□□□ -1.49
RNU6-840P-201ENST00000517275 RNF135Q8IUD6 432 aa5.75□□□□□ -1.49
RNU6-840P-201ENST00000517275 PLPP7Q8NBV4 271 aa5.75□□□□□ -1.49
RNU6-840P-201ENST00000517275 C1orf216Q8TAB5 229 aa5.75□□□□□ -1.49
RNU6-840P-201ENST00000517275 WBP1LQ9NX94 342 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms