RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 CLTCL1P53675 1640 aa8.34□□□□□ -1.07
SCARNA6.1-201ENST00000516989 NPHP4O75161 1426 aaPredicted RBP8.34□□□□□ -1.07
SCARNA6.1-201ENST00000516989 ZNF142P52746 1687 aaPredicted RBP8.34□□□□□ -1.08
SCARNA6.1-201ENST00000516989 ARHGAP23Q9P227 1491 aa8.33□□□□□ -1.08
SCARNA6.1-201ENST00000516989 PLPP6Q8IY26 295 aa8.33□□□□□ -1.08
SCARNA6.1-201ENST00000516989 L3MBTL2Q969R5 705 aa8.33□□□□□ -1.08
SCARNA6.1-201ENST00000516989 KDM4CQ9H3R0 1056 aa8.33□□□□□ -1.08
SCARNA6.1-201ENST00000516989 TBX22Q9Y458 520 aa8.33□□□□□ -1.08
SCARNA6.1-201ENST00000516989 SLIT1O75093 1534 aa8.33□□□□□ -1.08
SCARNA6.1-201ENST00000516989 ADGRF5Q8IZF2 1346 aa8.32□□□□□ -1.08
SCARNA6.1-201ENST00000516989 ZFYVE9O95405 1425 aa8.32□□□□□ -1.08
SCARNA6.1-201ENST00000516989 SPATA31E1Q6ZUB1 1445 aa8.32□□□□□ -1.08
SCARNA6.1-201ENST00000516989 GALR2O43603 387 aaPredicted RBP8.32□□□□□ -1.08
SCARNA6.1-201ENST00000516989 PDE4DQ08499 809 aa8.32□□□□□ -1.08
SCARNA6.1-201ENST00000516989 STRCQ7RTU9 1775 aa8.32□□□□□ -1.08
SCARNA6.1-201ENST00000516989 ZNF335Q9H4Z2 1342 aaPredicted RBP8.31□□□□□ -1.08
SCARNA6.1-201ENST00000516989 KIF1BO60333 1816 aa8.31□□□□□ -1.08
SCARNA6.1-201ENST00000516989 HOMEZQ8IX15 550 aa8.31□□□□□ -1.08
SCARNA6.1-201ENST00000516989 PDCD7Q8N8D1 485 aaKnown RBP8.31□□□□□ -1.08
SCARNA6.1-201ENST00000516989 STAC3Q96MF2 364 aa8.31□□□□□ -1.08
SCARNA6.1-201ENST00000516989 PLEKHG1Q9ULL1 1385 aa8.31□□□□□ -1.08
SCARNA6.1-201ENST00000516989 MED14O60244 1454 aa8.31□□□□□ -1.08
SCARNA6.1-201ENST00000516989 KDM5AP29375 1690 aaKnown RBP8.3□□□□□ -1.08
SCARNA6.1-201ENST00000516989 KCNA6P17658 529 aa8.3□□□□□ -1.08
SCARNA6.1-201ENST00000516989 CFAP70Q5T0N1 1121 aa8.3□□□□□ -1.08
SCARNA6.1-201ENST00000516989 MYO5BQ9ULV0 1848 aa8.3□□□□□ -1.08
SCARNA6.1-201ENST00000516989 C2orf72A6NCS6 295 aa8.29□□□□□ -1.08
SCARNA6.1-201ENST00000516989 GRXCR2A6NFK2 248 aa8.29□□□□□ -1.08
SCARNA6.1-201ENST00000516989 MAP3K9P80192 1104 aa8.29□□□□□ -1.08
SCARNA6.1-201ENST00000516989 TMEM132EQ6IEE7 984 aa8.29□□□□□ -1.08
SCARNA6.1-201ENST00000516989 PROSER2Q86WR7 435 aaPredicted RBP8.29□□□□□ -1.08
SCARNA6.1-201ENST00000516989 TMEM121BQ9BXQ6 578 aaPredicted RBP8.29□□□□□ -1.08
SCARNA6.1-201ENST00000516989 C14orf93Q9H972 538 aaKnown RBP8.29□□□□□ -1.08
SCARNA6.1-201ENST00000516989 AMOTL2Q9Y2J4 779 aa8.29□□□□□ -1.08
SCARNA6.1-201ENST00000516989 BOLA1Q9Y3E2 137 aa8.29□□□□□ -1.08
SCARNA6.1-201ENST00000516989 TONSLQ96HA7 1378 aa8.29□□□□□ -1.08
SCARNA6.1-201ENST00000516989 GPR37O15354 613 aa8.28□□□□□ -1.08
SCARNA6.1-201ENST00000516989 ATN1P54259 1190 aaPredicted RBP8.28□□□□□ -1.08
SCARNA6.1-201ENST00000516989 STK26Q9P289 416 aa8.28□□□□□ -1.08
SCARNA6.1-201ENST00000516989 NEXMIFQ5QGS0 1516 aa8.28□□□□□ -1.08
SCARNA6.1-201ENST00000516989 CLSPNQ9HAW4 1339 aa8.28□□□□□ -1.08
SCARNA6.1-201ENST00000516989 NEURL4Q96JN8 1562 aa8.27□□□□□ -1.09
SCARNA6.1-201ENST00000516989 NUTM2FA1L443 756 aa8.27□□□□□ -1.09
SCARNA6.1-201ENST00000516989 G3V3G9 751 aa8.27□□□□□ -1.09
SCARNA6.1-201ENST00000516989 KIF3CO14782 793 aa8.27□□□□□ -1.09
SCARNA6.1-201ENST00000516989 CERKQ8TCT0 537 aa8.27□□□□□ -1.09
SCARNA6.1-201ENST00000516989 RBM33Q96EV2 1170 aaKnown RBP8.27□□□□□ -1.09
SCARNA6.1-201ENST00000516989 OCEL1Q9H607 264 aa8.27□□□□□ -1.09
SCARNA6.1-201ENST00000516989 ADAMTS13Q76LX8 1427 aa8.27□□□□□ -1.09
SCARNA6.1-201ENST00000516989 IQGAP1P46940 1657 aa8.27□□□□□ -1.09
SCARNA6.1-201ENST00000516989 MINK1Q8N4C8 1332 aaPredicted RBP8.27□□□□□ -1.09
SCARNA6.1-201ENST00000516989 METP08581 1390 aa8.26□□□□□ -1.09
SCARNA6.1-201ENST00000516989 IRX5P78411 483 aaPredicted RBP8.26□□□□□ -1.09
SCARNA6.1-201ENST00000516989 POLR1AO95602 1720 aaPredicted RBP8.26□□□□□ -1.09
SCARNA6.1-201ENST00000516989 PIK3R4Q99570 1358 aa8.24□□□□□ -1.09
SCARNA6.1-201ENST00000516989 ATMINO43313 823 aaPredicted RBP8.24□□□□□ -1.09
SCARNA6.1-201ENST00000516989 CLCN6P51797 869 aa8.24□□□□□ -1.09
SCARNA6.1-201ENST00000516989 NBPF1Q3BBV0 1214 aa8.24□□□□□ -1.09
SCARNA6.1-201ENST00000516989 NBPF8Q3BBV2 869 aa8.24□□□□□ -1.09
SCARNA6.1-201ENST00000516989 UPF1Q92900 1129 aaKnown RBP eCLIP8.24□□□□□ -1.09
SCARNA6.1-201ENST00000516989 PPLO60437 1756 aa8.23□□□□□ -1.09
SCARNA6.1-201ENST00000516989 IRF6O14896 467 aa8.23□□□□□ -1.09
SCARNA6.1-201ENST00000516989 OSBPP22059 807 aa8.23□□□□□ -1.09
SCARNA6.1-201ENST00000516989 MAP2K5Q13163 448 aa8.23□□□□□ -1.09
SCARNA6.1-201ENST00000516989 IER5LQ5T953 404 aa8.23□□□□□ -1.09
SCARNA6.1-201ENST00000516989 WAPLQ7Z5K2 1190 aa8.23□□□□□ -1.09
SCARNA6.1-201ENST00000516989 FAM117AQ9C073 453 aa8.23□□□□□ -1.09
SCARNA6.1-201ENST00000516989 POGKQ9P215 609 aa8.23□□□□□ -1.09
SCARNA6.1-201ENST00000516989 TRAK1Q9UPV9 953 aa8.23□□□□□ -1.09
SCARNA6.1-201ENST00000516989 MYOM2P54296 1465 aa8.23□□□□□ -1.09
SCARNA6.1-201ENST00000516989 ALKQ9UM73 1620 aa8.22□□□□□ -1.09
SCARNA6.1-201ENST00000516989 PIK3C2GO75747 1445 aa8.22□□□□□ -1.09
SCARNA6.1-201ENST00000516989 PTPRUQ92729 1446 aa8.22□□□□□ -1.09
SCARNA6.1-201ENST00000516989 SAFB2Q14151 953 aaKnown RBP eCLIP8.22□□□□□ -1.09
SCARNA6.1-201ENST00000516989 CCDC102AQ96A19 550 aa8.22□□□□□ -1.09
SCARNA6.1-201ENST00000516989 SETBP1Q9Y6X0 1596 aa8.22□□□□□ -1.09
SCARNA6.1-201ENST00000516989 TMEM94Q12767 1356 aa8.22□□□□□ -1.09
SCARNA6.1-201ENST00000516989 NRXN1Q9ULB1 1477 aa8.21□□□□□ -1.09
SCARNA6.1-201ENST00000516989 ZNF316A6NFI3 1004 aaPredicted RBP8.21□□□□□ -1.1
SCARNA6.1-201ENST00000516989 UBAP1LF5GYI3 381 aa8.21□□□□□ -1.1
SCARNA6.1-201ENST00000516989 HAX1O00165 279 aa8.21□□□□□ -1.1
SCARNA6.1-201ENST00000516989 GNPATO15228 680 aa8.21□□□□□ -1.1
SCARNA6.1-201ENST00000516989 PTGER2P43116 358 aa8.21□□□□□ -1.1
SCARNA6.1-201ENST00000516989 ZMYND15Q9H091 742 aa8.21□□□□□ -1.1
SCARNA6.1-201ENST00000516989 LRPPRCP42704 1394 aaKnown RBP8.21□□□□□ -1.1
SCARNA6.1-201ENST00000516989 PRAG1Q86YV5 1406 aa8.2□□□□□ -1.1
SCARNA6.1-201ENST00000516989 CPS1P31327 1500 aa8.2□□□□□ -1.1
SCARNA6.1-201ENST00000516989 TOM1O60784 492 aa8.2□□□□□ -1.1
SCARNA6.1-201ENST00000516989 FCHSD2O94868 740 aa8.2□□□□□ -1.1
SCARNA6.1-201ENST00000516989 PLCG2P16885 1265 aa8.2□□□□□ -1.1
SCARNA6.1-201ENST00000516989 ATF3P18847 181 aa8.2□□□□□ -1.1
SCARNA6.1-201ENST00000516989 EVX2Q03828 476 aa8.2□□□□□ -1.1
SCARNA6.1-201ENST00000516989 ASTLQ6HA08 431 aaPredicted RBP8.2□□□□□ -1.1
SCARNA6.1-201ENST00000516989 OXER1Q8TDS5 423 aa8.2□□□□□ -1.1
SCARNA6.1-201ENST00000516989 DDX12PQ92771 950 aa8.2□□□□□ -1.1
SCARNA6.1-201ENST00000516989 SIRT1Q96EB6 747 aa8.2□□□□□ -1.1
SCARNA6.1-201ENST00000516989 L3MBTL3Q96JM7 780 aaPredicted RBP8.2□□□□□ -1.1
SCARNA6.1-201ENST00000516989 PRAM1Q96QH2 718 aa8.2□□□□□ -1.1
SCARNA6.1-201ENST00000516989 CARD11Q9BXL7 1154 aa8.2□□□□□ -1.1
SCARNA6.1-201ENST00000516989 C19orf44Q9H6X5 657 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms