RNA–Protein interactions for RNA: ENST00000514962.5

CALCOCO2-224, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 765 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-224ENST00000514962 PBRM1Q86U86 1689 aa8.08□□□□□ -1.12
CALCOCO2-224ENST00000514962 ABCC10Q5T3U5 1492 aa8.08□□□□□ -1.12
CALCOCO2-224ENST00000514962 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.08□□□□□ -1.12
CALCOCO2-224ENST00000514962 MYH16Q9H6N6 1097 aa8.08□□□□□ -1.12
CALCOCO2-224ENST00000514962 TROQ12816 1431 aaPredicted RBP8.08□□□□□ -1.12
CALCOCO2-224ENST00000514962 ERBINQ96RT1 1412 aa8.08□□□□□ -1.12
CALCOCO2-224ENST00000514962 ANKRD50Q9ULJ7 1429 aa8.08□□□□□ -1.12
CALCOCO2-224ENST00000514962 PLEKHH1Q9ULM0 1364 aa8.08□□□□□ -1.12
CALCOCO2-224ENST00000514962 RNF17Q9BXT8 1623 aaKnown RBP8.07□□□□□ -1.12
CALCOCO2-224ENST00000514962 ADAMTS12P58397 1594 aa8.07□□□□□ -1.12
CALCOCO2-224ENST00000514962 TRAK2O60296 914 aa8.07□□□□□ -1.12
CALCOCO2-224ENST00000514962 NECTIN2Q92692 538 aa8.07□□□□□ -1.12
CALCOCO2-224ENST00000514962 GRPEL1Q9HAV7 217 aa8.07□□□□□ -1.12
CALCOCO2-224ENST00000514962 URB2Q14146 1524 aaKnown RBP8.07□□□□□ -1.12
CALCOCO2-224ENST00000514962 NPC1L1Q9UHC9 1359 aa8.07□□□□□ -1.12
CALCOCO2-224ENST00000514962 KIAA0556O60303 1618 aa8.07□□□□□ -1.12
CALCOCO2-224ENST00000514962 SYNMO15061 1565 aa8.06□□□□□ -1.12
CALCOCO2-224ENST00000514962 WDR43Q15061 677 aaKnown RBP eCLIP8.06□□□□□ -1.12
CALCOCO2-224ENST00000514962 SKOR2Q2VWA4 1001 aaPredicted RBP8.06□□□□□ -1.12
CALCOCO2-224ENST00000514962 LCE2DQ5TA82 110 aaPredicted RBP8.06□□□□□ -1.12
CALCOCO2-224ENST00000514962 PMFBP1Q8TBY8 1022 aa8.06□□□□□ -1.12
CALCOCO2-224ENST00000514962 TMC2Q8TDI7 906 aa8.06□□□□□ -1.12
CALCOCO2-224ENST00000514962 TBC1D2Q9BYX2 928 aa8.06□□□□□ -1.12
CALCOCO2-224ENST00000514962 SLKQ9H2G2 1235 aaPredicted RBP8.06□□□□□ -1.12
CALCOCO2-224ENST00000514962 CDC42BPAQ5VT25 1732 aa8.06□□□□□ -1.12
CALCOCO2-224ENST00000514962 NUP153P49790 1475 aaKnown RBP8.06□□□□□ -1.12
CALCOCO2-224ENST00000514962 CCDC141Q6ZP82 1450 aa8.06□□□□□ -1.12
CALCOCO2-224ENST00000514962 GPATCH8Q9UKJ3 1502 aaKnown RBP8.05□□□□□ -1.12
CALCOCO2-224ENST00000514962 E9PSI1 815 aa8.05□□□□□ -1.12
CALCOCO2-224ENST00000514962 CLUAP1Q96AJ1 413 aa8.05□□□□□ -1.12
CALCOCO2-224ENST00000514962 TRIM44Q96DX7 344 aaPredicted RBP8.05□□□□□ -1.12
CALCOCO2-224ENST00000514962 PCDH10Q9P2E7 1040 aa8.05□□□□□ -1.12
CALCOCO2-224ENST00000514962 NUP155O75694 1391 aa8.05□□□□□ -1.12
CALCOCO2-224ENST00000514962 ARHGEF5Q12774 1597 aa8.05□□□□□ -1.12
CALCOCO2-224ENST00000514962 NCOA3Q9Y6Q9 1424 aa8.04□□□□□ -1.12
CALCOCO2-224ENST00000514962 TARBP1Q13395 1621 aaKnown RBP8.04□□□□□ -1.12
CALCOCO2-224ENST00000514962 APBB1O00213 710 aa8.04□□□□□ -1.12
CALCOCO2-224ENST00000514962 TMF1P82094 1093 aa8.04□□□□□ -1.12
CALCOCO2-224ENST00000514962 CCDC173Q0VFZ6 552 aa8.04□□□□□ -1.12
CALCOCO2-224ENST00000514962 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.04□□□□□ -1.12
CALCOCO2-224ENST00000514962 MTERF4Q7Z6M4 381 aaKnown RBP8.04□□□□□ -1.12
CALCOCO2-224ENST00000514962 PANK2Q9BZ23 570 aa8.04□□□□□ -1.12
CALCOCO2-224ENST00000514962 ADAMTS8Q9UP79 889 aa8.04□□□□□ -1.12
CALCOCO2-224ENST00000514962 SYNJ2O15056 1496 aa8.04□□□□□ -1.12
CALCOCO2-224ENST00000514962 ZNF644Q9H582 1327 aaPredicted RBP8.03□□□□□ -1.12
CALCOCO2-224ENST00000514962 RTEL1-TNFRSF6BF6WH68 1400 aa8.03□□□□□ -1.12
CALCOCO2-224ENST00000514962 SHROOM2Q13796 1616 aa8.03□□□□□ -1.12
CALCOCO2-224ENST00000514962 TDRD9Q8NDG6 1382 aaKnown RBP8.03□□□□□ -1.12
CALCOCO2-224ENST00000514962 DISP3Q9P2K9 1392 aa8.03□□□□□ -1.12
CALCOCO2-224ENST00000514962 OFD1O75665 1012 aa8.03□□□□□ -1.12
CALCOCO2-224ENST00000514962 IGHDP01880 384 aa8.03□□□□□ -1.12
CALCOCO2-224ENST00000514962 PPP2R1AP30153 589 aa8.03□□□□□ -1.12
CALCOCO2-224ENST00000514962 EMP3P54852 163 aa8.03□□□□□ -1.12
CALCOCO2-224ENST00000514962 TESK2Q96S53 571 aa8.03□□□□□ -1.12
CALCOCO2-224ENST00000514962 PPP1R9BQ96SB3 815 aa8.03□□□□□ -1.12
CALCOCO2-224ENST00000514962 PANK3Q9H999 370 aa8.03□□□□□ -1.12
CALCOCO2-224ENST00000514962 MYO5CQ9NQX4 1742 aa8.03□□□□□ -1.12
CALCOCO2-224ENST00000514962 ASXL1Q8IXJ9 1541 aa8.03□□□□□ -1.12
CALCOCO2-224ENST00000514962 C9orf84Q5VXU9 1444 aa8.03□□□□□ -1.12
CALCOCO2-224ENST00000514962 UNC13BO14795 1591 aa8.02□□□□□ -1.13
CALCOCO2-224ENST00000514962 IBTKQ9P2D0 1353 aaPredicted RBP8.02□□□□□ -1.13
CALCOCO2-224ENST00000514962 HS1BP3Q53T59 392 aa8.02□□□□□ -1.13
CALCOCO2-224ENST00000514962 CC2D1BQ5T0F9 858 aaKnown RBP8.02□□□□□ -1.13
CALCOCO2-224ENST00000514962 TMEM92Q6UXU6 159 aa8.02□□□□□ -1.13
CALCOCO2-224ENST00000514962 C1orf115Q9H7X2 142 aa8.02□□□□□ -1.13
CALCOCO2-224ENST00000514962 CFDP1Q9UEE9 299 aaPredicted RBP8.02□□□□□ -1.13
CALCOCO2-224ENST00000514962 FAM135AQ9P2D6 1515 aa8.02□□□□□ -1.13
CALCOCO2-224ENST00000514962 ERBB4Q15303 1308 aa8.02□□□□□ -1.13
CALCOCO2-224ENST00000514962 IQGAP1P46940 1657 aa8.02□□□□□ -1.13
CALCOCO2-224ENST00000514962 WDR7Q9Y4E6 1490 aa8.01□□□□□ -1.13
CALCOCO2-224ENST00000514962 ZSCAN30Q86W11 494 aa8.01□□□□□ -1.13
CALCOCO2-224ENST00000514962 SMAP1Q8IYB5 467 aaPredicted RBP8.01□□□□□ -1.13
CALCOCO2-224ENST00000514962 SNX21Q969T3 373 aa8.01□□□□□ -1.13
CALCOCO2-224ENST00000514962 GBP4Q96PP9 640 aa8.01□□□□□ -1.13
CALCOCO2-224ENST00000514962 ZSWIM6Q9HCJ5 1215 aa8.01□□□□□ -1.13
CALCOCO2-224ENST00000514962 PRDM4Q9UKN5 801 aa8.01□□□□□ -1.13
CALCOCO2-224ENST00000514962 ARHGAP31Q2M1Z3 1444 aa8.01□□□□□ -1.13
CALCOCO2-224ENST00000514962 A2MP01023 1474 aa8□□□□□ -1.13
CALCOCO2-224ENST00000514962 DISP1Q96F81 1524 aa8□□□□□ -1.13
CALCOCO2-224ENST00000514962 HOXB3P14651 431 aaPredicted RBP8□□□□□ -1.13
CALCOCO2-224ENST00000514962 BRD2P25440 801 aaKnown RBP8□□□□□ -1.13
CALCOCO2-224ENST00000514962 DDIT3P35638 169 aa8□□□□□ -1.13
CALCOCO2-224ENST00000514962 CDCA8Q53HL2 280 aa8□□□□□ -1.13
CALCOCO2-224ENST00000514962 KIAA1211Q6ZU35 1233 aa8□□□□□ -1.13
CALCOCO2-224ENST00000514962 HSCBQ8IWL3 235 aa8□□□□□ -1.13
CALCOCO2-224ENST00000514962 RWDD1Q9H446 243 aaPredicted RBP8□□□□□ -1.13
CALCOCO2-224ENST00000514962 WDR70Q9NW82 654 aa8□□□□□ -1.13
CALCOCO2-224ENST00000514962 C2orf72A6NCS6 295 aa7.99□□□□□ -1.13
CALCOCO2-224ENST00000514962 ARID3CA6NKF2 412 aa7.99□□□□□ -1.13
CALCOCO2-224ENST00000514962 RBM25P49756 843 aaKnown RBP7.99□□□□□ -1.13
CALCOCO2-224ENST00000514962 TMCO4Q5TGY1 634 aa7.99□□□□□ -1.13
CALCOCO2-224ENST00000514962 SMC5Q8IY18 1101 aa7.99□□□□□ -1.13
CALCOCO2-224ENST00000514962 ANP32BQ92688 251 aaKnown RBP7.99□□□□□ -1.13
CALCOCO2-224ENST00000514962 MARVELD3Q96A59 401 aa7.99□□□□□ -1.13
CALCOCO2-224ENST00000514962 C22orf23Q9BZE7 217 aa7.99□□□□□ -1.13
CALCOCO2-224ENST00000514962 GZF1Q9H116 711 aaPredicted RBP7.99□□□□□ -1.13
CALCOCO2-224ENST00000514962 SLC24A3Q9HC58 644 aa7.99□□□□□ -1.13
CALCOCO2-224ENST00000514962 KNSTRNQ9Y448 316 aa7.99□□□□□ -1.13
CALCOCO2-224ENST00000514962 ATP10AO60312 1499 aa7.99□□□□□ -1.13
CALCOCO2-224ENST00000514962 GRIN2AQ12879 1464 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms