RNA–Protein interactions for RNA: ENST00000512944.5

EXOC3-209, Transcript of exocyst complex component 3, human

APPRIS P1 TSL 1 (best) BASIC

Gene EXOC3, Length 2,825 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EXOC3-209	ENST00000512944	FRMPD1	Q5SYB0	1578 aa		32.13	■■■□□ 2.73
EXOC3-209	ENST00000512944	PTMS	P20962	102 aa		32.13	■■■□□ 2.73
EXOC3-209	ENST00000512944	PDCL3	Q9H2J4	239 aa		32.13	■■■□□ 2.73
EXOC3-209	ENST00000512944	EXOSC9	Q06265	439 aa	Known RBP	32.13	■■■□□ 2.73
EXOC3-209	ENST00000512944	ATF7IP	Q6VMQ6	1270 aa		32.11	■■■□□ 2.73
EXOC3-209	ENST00000512944	SSH1	Q8WYL5	1049 aa		32.11	■■■□□ 2.73
EXOC3-209	ENST00000512944	ZFYVE16	Q7Z3T8	1539 aa		32.11	■■■□□ 2.73
EXOC3-209	ENST00000512944	CT47B1	P0C2W7	299 aa	Predicted RBP	32.11	■■■□□ 2.73
EXOC3-209	ENST00000512944	U2AF1L5	P0DN76	240 aa	Predicted RBP	32.11	■■■□□ 2.73
EXOC3-209	ENST00000512944	U2AF1	Q01081	240 aa	Known RBP eCLIP	32.11	■■■□□ 2.73	2e-8	■■■■■ 29.2
EXOC3-209	ENST00000512944	NASP	P49321	788 aa	Predicted RBP	32.1	■■■□□ 2.73
EXOC3-209	ENST00000512944	LNPK	Q9C0E8	428 aa		32.1	■■■□□ 2.73
EXOC3-209	ENST00000512944	PPP1R9B	Q96SB3	815 aa		32.1	■■■□□ 2.73
EXOC3-209	ENST00000512944	CD2BP2	O95400	341 aa	Known RBP	32.09	■■■□□ 2.73
EXOC3-209	ENST00000512944	ATP7A	Q04656	1500 aa		32.09	■■■□□ 2.73
EXOC3-209	ENST00000512944	KIF2C	Q99661	725 aa		32.09	■■■□□ 2.73
EXOC3-209	ENST00000512944	NUCB1	Q02818	461 aa		32.08	■■■□□ 2.73
EXOC3-209	ENST00000512944	TMEM57	Q8N5G2	664 aa		32.08	■■■□□ 2.73
EXOC3-209	ENST00000512944	NOB1	Q9ULX3	412 aa	Known RBP	32.08	■■■□□ 2.73
EXOC3-209	ENST00000512944	INO80	Q9ULG1	1556 aa	Predicted RBP	32.08	■■■□□ 2.73
EXOC3-209	ENST00000512944	ZSCAN30	Q86W11	494 aa		32.08	■■■□□ 2.73
EXOC3-209	ENST00000512944	ZBTB40	Q9NUA8	1239 aa		32.07	■■■□□ 2.72
EXOC3-209	ENST00000512944	KIDINS220	Q9ULH0	1771 aa		32.07	■■■□□ 2.72
EXOC3-209	ENST00000512944	SBNO2	Q9Y2G9	1366 aa		32.06	■■■□□ 2.72
EXOC3-209	ENST00000512944	MLH3	Q9UHC1	1453 aa		32.06	■■■□□ 2.72
EXOC3-209	ENST00000512944	SSFA2	P28290	1259 aa		32.05	■■■□□ 2.72
EXOC3-209	ENST00000512944	NCBP3	Q53F19	620 aa	Known RBP	32.05	■■■□□ 2.72
EXOC3-209	ENST00000512944	MYO3A	Q8NEV4	1616 aa		32.05	■■■□□ 2.72
EXOC3-209	ENST00000512944	HECW2	Q9P2P5	1572 aa		32.05	■■■□□ 2.72
EXOC3-209	ENST00000512944	MYOM2	P54296	1465 aa		32.04	■■■□□ 2.72
EXOC3-209	ENST00000512944	TET3	O43151	1660 aa		32.04	■■■□□ 2.72
EXOC3-209	ENST00000512944	ANP32B	Q92688	251 aa	Known RBP	32.04	■■■□□ 2.72
EXOC3-209	ENST00000512944		K7ELQ4	463 aa	Predicted RBP	32.03	■■■□□ 2.72
EXOC3-209	ENST00000512944	OFD1	O75665	1012 aa		32.02	■■■□□ 2.72
EXOC3-209	ENST00000512944	CHD1L	Q86WJ1	897 aa		32.02	■■■□□ 2.72
EXOC3-209	ENST00000512944	ADGRB2	O60241	1585 aa		32.01	■■■□□ 2.72
EXOC3-209	ENST00000512944	UGGT1	Q9NYU2	1555 aa		32.01	■■■□□ 2.72
EXOC3-209	ENST00000512944	YEATS2	Q9ULM3	1422 aa		32.01	■■■□□ 2.71
EXOC3-209	ENST00000512944	GOLGA6L22	H0YM25	854 aa		32.01	■■■□□ 2.71
EXOC3-209	ENST00000512944	RBM42	Q9BTD8	480 aa	Known RBP	32.01	■■■□□ 2.71
EXOC3-209	ENST00000512944	MSN	P26038	577 aa	Known RBP	32	■■■□□ 2.71
EXOC3-209	ENST00000512944	DDX49	Q9Y6V7	483 aa	Known RBP	32	■■■□□ 2.71
EXOC3-209	ENST00000512944	BMP2KL	Q5H9B9	411 aa		31.99	■■■□□ 2.71
EXOC3-209	ENST00000512944	GAS2L2	Q8NHY3	880 aa		31.98	■■■□□ 2.71
EXOC3-209	ENST00000512944	TRAK1	Q9UPV9	953 aa		31.98	■■■□□ 2.71
EXOC3-209	ENST00000512944	KLHL40	Q2TBA0	621 aa		31.98	■■■□□ 2.71
EXOC3-209	ENST00000512944	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	31.96	■■■□□ 2.71
EXOC3-209	ENST00000512944	AK9	Q5TCS8	1911 aa		31.96	■■■□□ 2.71
EXOC3-209	ENST00000512944	DEPDC5	O75140	1603 aa		31.96	■■■□□ 2.71
EXOC3-209	ENST00000512944	NEURL4	Q96JN8	1562 aa		31.95	■■■□□ 2.71
EXOC3-209	ENST00000512944	BAG4	O95429	457 aa	Known RBP	31.95	■■■□□ 2.71
EXOC3-209	ENST00000512944	IBTK	Q9P2D0	1353 aa	Predicted RBP	31.95	■■■□□ 2.7
EXOC3-209	ENST00000512944	RBM10	P98175	930 aa	Known RBP	31.95	■■■□□ 2.7
EXOC3-209	ENST00000512944	RIPK4	P57078	832 aa		31.94	■■■□□ 2.7
EXOC3-209	ENST00000512944	TRIM35	Q9UPQ4	493 aa		31.94	■■■□□ 2.7
EXOC3-209	ENST00000512944	NOS1	P29475	1434 aa		31.94	■■■□□ 2.7
EXOC3-209	ENST00000512944	CLEC17A	Q6ZS10	378 aa		31.93	■■■□□ 2.7
EXOC3-209	ENST00000512944	USP32	Q8NFA0	1604 aa		31.93	■■■□□ 2.7
EXOC3-209	ENST00000512944	TMPO	P42166	694 aa	Known RBP	31.93	■■■□□ 2.7
EXOC3-209	ENST00000512944	TBC1D9	Q6ZT07	1266 aa		31.92	■■■□□ 2.7
EXOC3-209	ENST00000512944	KIF1B	O60333	1816 aa		31.92	■■■□□ 2.7
EXOC3-209	ENST00000512944	ANKRD45	Q5TZF3	282 aa		31.92	■■■□□ 2.7
EXOC3-209	ENST00000512944	IPO8	O15397	1037 aa	Known RBP	31.91	■■■□□ 2.7
EXOC3-209	ENST00000512944	IFT172	Q9UG01	1749 aa		31.91	■■■□□ 2.7
EXOC3-209	ENST00000512944	DIP2C	Q9Y2E4	1556 aa		31.91	■■■□□ 2.7
EXOC3-209	ENST00000512944	U2SURP	O15042	1029 aa	Known RBP	31.9	■■■□□ 2.7
EXOC3-209	ENST00000512944	KIF16B	Q96L93	1317 aa		31.9	■■■□□ 2.7
EXOC3-209	ENST00000512944	QRICH2	Q9H0J4	1663 aa		31.9	■■■□□ 2.7
EXOC3-209	ENST00000512944	ABCC11	Q96J66	1382 aa		31.89	■■■□□ 2.7
EXOC3-209	ENST00000512944	PLEKHF1	Q96S99	279 aa		31.89	■■■□□ 2.7
EXOC3-209	ENST00000512944	R3HCC1	Q9Y3T6	440 aa	Known RBP	31.88	■■■□□ 2.69
EXOC3-209	ENST00000512944	ZC3H13	Q5T200	1668 aa	Known RBP	31.88	■■■□□ 2.69
EXOC3-209	ENST00000512944	TERF1	P54274	439 aa		31.88	■■■□□ 2.69
EXOC3-209	ENST00000512944	MROH2A	A6NES4	1674 aa		31.86	■■■□□ 2.69
EXOC3-209	ENST00000512944	KIF3B	O15066	747 aa		31.86	■■■□□ 2.69
EXOC3-209	ENST00000512944	NCL	P19338	710 aa	Known RBP	31.86	■■■□□ 2.69
EXOC3-209	ENST00000512944	ZNF445	P59923	1031 aa		31.86	■■■□□ 2.69
EXOC3-209	ENST00000512944	NRXN1	Q9ULB1	1477 aa		31.86	■■■□□ 2.69
EXOC3-209	ENST00000512944	MCTP1	Q6DN14	999 aa		31.85	■■■□□ 2.69
EXOC3-209	ENST00000512944	CAVIN1	Q6NZI2	390 aa	Known RBP	31.85	■■■□□ 2.69
EXOC3-209	ENST00000512944	VWDE	Q8N2E2	1590 aa		31.84	■■■□□ 2.69
EXOC3-209	ENST00000512944	CALD1	Q05682	793 aa	Known RBP	31.84	■■■□□ 2.69
EXOC3-209	ENST00000512944	FAM13B	Q9NYF5	915 aa		31.84	■■■□□ 2.69
EXOC3-209	ENST00000512944	ZSCAN23	Q3MJ62	389 aa		31.82	■■■□□ 2.68
EXOC3-209	ENST00000512944	IL16	Q14005	1332 aa		31.82	■■■□□ 2.68
EXOC3-209	ENST00000512944	PPIP5K1	Q6PFW1	1433 aa		31.82	■■■□□ 2.68
EXOC3-209	ENST00000512944	HS1BP3	Q53T59	392 aa		31.81	■■■□□ 2.68
EXOC3-209	ENST00000512944	SETBP1	Q9Y6X0	1596 aa		31.81	■■■□□ 2.68
EXOC3-209	ENST00000512944	GCC1	Q96CN9	775 aa		31.81	■■■□□ 2.68
EXOC3-209	ENST00000512944	C1orf115	Q9H7X2	142 aa		31.81	■■■□□ 2.68
EXOC3-209	ENST00000512944	NOL7	Q9UMY1	257 aa	Known RBP	31.81	■■■□□ 2.68
EXOC3-209	ENST00000512944	TMEM132E	Q6IEE7	984 aa		31.81	■■■□□ 2.68
EXOC3-209	ENST00000512944	RBSN	Q9H1K0	784 aa		31.81	■■■□□ 2.68
EXOC3-209	ENST00000512944	ARHGEF40	Q8TER5	1519 aa		31.79	■■■□□ 2.68
EXOC3-209	ENST00000512944	ARHGAP31	Q2M1Z3	1444 aa		31.79	■■■□□ 2.68
EXOC3-209	ENST00000512944	NSD2	O96028	1365 aa		31.79	■■■□□ 2.68
EXOC3-209	ENST00000512944	CHGA	P10645	457 aa	Known RBP	31.79	■■■□□ 2.68
EXOC3-209	ENST00000512944	XPC	Q01831	940 aa	Predicted RBP	31.79	■■■□□ 2.68
EXOC3-209	ENST00000512944	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	31.78	■■■□□ 2.68
EXOC3-209	ENST00000512944	LMBRD1	Q9NUN5	540 aa		31.78	■■■□□ 2.68

Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms