RNA–Protein interactions for RNA: ENST00000511615.5

SUB1-209, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 1,658 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-209ENST00000511615 ANKRD36BQ8N2N9 1353 aa12.31□□□□□ -0.44
SUB1-209ENST00000511615 SRPK2P78362 688 aaKnown RBP12.31□□□□□ -0.44
SUB1-209ENST00000511615 CCDC146Q8IYE0 955 aa12.31□□□□□ -0.44
SUB1-209ENST00000511615 CCDC61Q9Y6R9 512 aa12.31□□□□□ -0.44
SUB1-209ENST00000511615 USP32Q8NFA0 1604 aa12.3□□□□□ -0.44
SUB1-209ENST00000511615 NCBP3Q53F19 620 aaKnown RBP12.3□□□□□ -0.44
SUB1-209ENST00000511615 CHD2O14647 1828 aaKnown RBP12.3□□□□□ -0.44
SUB1-209ENST00000511615 PLIN1O60240 522 aa12.29□□□□□ -0.44
SUB1-209ENST00000511615 ADGRB2O60241 1585 aa12.29□□□□□ -0.44
SUB1-209ENST00000511615 RUNDC1Q96C34 613 aa12.29□□□□□ -0.44
SUB1-209ENST00000511615 NCOA3Q9Y6Q9 1424 aa12.29□□□□□ -0.44
SUB1-209ENST00000511615 PLEKHG3A1L390 1219 aa12.29□□□□□ -0.44
SUB1-209ENST00000511615 NUDT16Q96DE0 195 aaKnown RBP12.29□□□□□ -0.44
SUB1-209ENST00000511615 NKTRP30414 1462 aaKnown RBP12.28□□□□□ -0.44
SUB1-209ENST00000511615 TERF2IPQ9NYB0 399 aa12.28□□□□□ -0.44
SUB1-209ENST00000511615 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.27□□□□□ -0.45
SUB1-209ENST00000511615 CABP1Q9NZU7 370 aa12.27□□□□□ -0.45
SUB1-209ENST00000511615 NWD1Q149M9 1564 aa12.27□□□□□ -0.45
SUB1-209ENST00000511615 CENPQQ7L2Z9 268 aaPredicted RBP12.26□□□□□ -0.45
SUB1-209ENST00000511615 ZNF692Q9BU19 519 aaPredicted RBP12.26□□□□□ -0.45
SUB1-209ENST00000511615 PRR36Q9H6K5 1346 aa12.26□□□□□ -0.45
SUB1-209ENST00000511615 CPSF1Q10570 1443 aaKnown RBP12.26□□□□□ -0.45
SUB1-209ENST00000511615 CD163L1Q9NR16 1453 aa12.25□□□□□ -0.45
SUB1-209ENST00000511615 STRCQ7RTU9 1775 aa12.25□□□□□ -0.45
SUB1-209ENST00000511615 MTHFSP49914 203 aa12.25□□□□□ -0.45
SUB1-209ENST00000511615 WDR63Q8IWG1 891 aa12.25□□□□□ -0.45
SUB1-209ENST00000511615 NOP58Q9Y2X3 529 aaKnown RBP12.25□□□□□ -0.45
SUB1-209ENST00000511615 CCDC27Q2M243 656 aa12.24□□□□□ -0.45
SUB1-209ENST00000511615 PROSER2Q86WR7 435 aaPredicted RBP12.24□□□□□ -0.45
SUB1-209ENST00000511615 WWC1Q8IX03 1113 aa12.24□□□□□ -0.45
SUB1-209ENST00000511615 C19orf44Q9H6X5 657 aa12.24□□□□□ -0.45
SUB1-209ENST00000511615 ANKARQ7Z5J8 1434 aa12.24□□□□□ -0.45
SUB1-209ENST00000511615 ATP7BP35670 1465 aa12.24□□□□□ -0.45
SUB1-209ENST00000511615 PDE4AP27815 886 aa12.23□□□□□ -0.45
SUB1-209ENST00000511615 TNNT2P45379 298 aaPredicted RBP12.23□□□□□ -0.45
SUB1-209ENST00000511615 HDGFL2Q7Z4V5 671 aaPredicted RBP12.23□□□□□ -0.45
SUB1-209ENST00000511615 IPO9Q96P70 1041 aaKnown RBP12.23□□□□□ -0.45
SUB1-209ENST00000511615 ADGRL3Q9HAR2 1447 aa12.23□□□□□ -0.45
SUB1-209ENST00000511615 A0A1W2PP64 1363 aa12.23□□□□□ -0.45
SUB1-209ENST00000511615 PDE3AQ14432 1141 aa12.22□□□□□ -0.45
SUB1-209ENST00000511615 C20orf194Q5TEA3 1177 aa12.22□□□□□ -0.45
SUB1-209ENST00000511615 AAMPQ13685 434 aa12.22□□□□□ -0.45
SUB1-209ENST00000511615 TCP11L2Q8N4U5 519 aa12.22□□□□□ -0.45
SUB1-209ENST00000511615 PNNQ9H307 717 aaKnown RBP12.22□□□□□ -0.45
SUB1-209ENST00000511615 PPIP5K1Q6PFW1 1433 aa12.21□□□□□ -0.45
SUB1-209ENST00000511615 BACH2Q9BYV9 841 aa12.21□□□□□ -0.45
SUB1-209ENST00000511615 MYH16Q9H6N6 1097 aa12.21□□□□□ -0.45
SUB1-209ENST00000511615 ZBTB47Q9UFB7 747 aaPredicted RBP12.21□□□□□ -0.45
SUB1-209ENST00000511615 KDM2BQ8NHM5 1336 aa12.2□□□□□ -0.46
SUB1-209ENST00000511615 FYB1O15117 783 aa12.2□□□□□ -0.46
SUB1-209ENST00000511615 CANXP27824 592 aaKnown RBP12.2□□□□□ -0.46
SUB1-209ENST00000511615 SPINK5Q9NQ38 1064 aaPredicted RBP12.2□□□□□ -0.46
SUB1-209ENST00000511615 CDC42BPGQ6DT37 1551 aa12.19□□□□□ -0.46
SUB1-209ENST00000511615 U2AF1L5P0DN76 240 aaPredicted RBP12.19□□□□□ -0.46
SUB1-209ENST00000511615 U2AF1Q01081 240 aaKnown RBP eCLIP12.19□□□□□ -0.46
SUB1-209ENST00000511615 TMEM94Q12767 1356 aa12.19□□□□□ -0.46
SUB1-209ENST00000511615 IQSEC2Q5JU85 1478 aa12.19□□□□□ -0.46
SUB1-209ENST00000511615 DCCP43146 1447 aa12.18□□□□□ -0.46
SUB1-209ENST00000511615 SSH2Q76I76 1423 aa12.18□□□□□ -0.46
SUB1-209ENST00000511615 ACEP12821 1306 aa12.18□□□□□ -0.46
SUB1-209ENST00000511615 SHPRHQ149N8 1683 aa12.18□□□□□ -0.46
SUB1-209ENST00000511615 EDC4Q6P2E9 1401 aaKnown RBP12.18□□□□□ -0.46
SUB1-209ENST00000511615 BCAR3O75815 825 aa12.17□□□□□ -0.46
SUB1-209ENST00000511615 CT47B1P0C2W7 299 aaPredicted RBP12.17□□□□□ -0.46
SUB1-209ENST00000511615 NEUROD2Q15784 382 aa12.17□□□□□ -0.46
SUB1-209ENST00000511615 RBM33Q96EV2 1170 aaKnown RBP12.17□□□□□ -0.46
SUB1-209ENST00000511615 CNKSR2Q8WXI2 1034 aa12.16□□□□□ -0.46
SUB1-209ENST00000511615 DDRGK1Q96HY6 314 aa12.16□□□□□ -0.46
SUB1-209ENST00000511615 HOXD11P31277 338 aaPredicted RBP12.16□□□□□ -0.46
SUB1-209ENST00000511615 CADPS2Q86UW7 1296 aa12.16□□□□□ -0.46
SUB1-209ENST00000511615 RRP7AQ9Y3A4 280 aaKnown RBP12.16□□□□□ -0.46
SUB1-209ENST00000511615 ZNF335Q9H4Z2 1342 aaPredicted RBP12.15□□□□□ -0.46
SUB1-209ENST00000511615 MAPK8IP3Q9UPT6 1336 aa12.15□□□□□ -0.46
SUB1-209ENST00000511615 GGNBP2Q9H3C7 697 aa12.15□□□□□ -0.46
SUB1-209ENST00000511615 PHF8Q9UPP1 1060 aa12.15□□□□□ -0.46
SUB1-209ENST00000511615 STRCP1A6NGW2 1772 aa12.14□□□□□ -0.47
SUB1-209ENST00000511615 LRRC7Q96NW7 1537 aa12.14□□□□□ -0.47
SUB1-209ENST00000511615 U2SURPO15042 1029 aaKnown RBP12.14□□□□□ -0.47
SUB1-209ENST00000511615 RARSP54136 660 aaKnown RBP12.14□□□□□ -0.47
SUB1-209ENST00000511615 TOPAZ1Q8N9V7 1692 aa12.14□□□□□ -0.47
SUB1-209ENST00000511615 TTC21BQ7Z4L5 1316 aa12.14□□□□□ -0.47
SUB1-209ENST00000511615 TTC21AQ8NDW8 1320 aa12.14□□□□□ -0.47
SUB1-209ENST00000511615 USP6P35125 1406 aa12.14□□□□□ -0.47
SUB1-209ENST00000511615 FMN2Q9NZ56 1722 aa12.14□□□□□ -0.47
SUB1-209ENST00000511615 NUTM2FA1L443 756 aa12.13□□□□□ -0.47
SUB1-209ENST00000511615 DIAPH1O60610 1272 aaKnown RBP12.13□□□□□ -0.47
SUB1-209ENST00000511615 NEFMP07197 916 aa12.13□□□□□ -0.47
SUB1-209ENST00000511615 ATF3P18847 181 aa12.13□□□□□ -0.47
SUB1-209ENST00000511615 NPM2Q86SE8 214 aaKnown RBP12.13□□□□□ -0.47
SUB1-209ENST00000511615 C14orf37Q86TY3 774 aa12.13□□□□□ -0.47
SUB1-209ENST00000511615 NALCNQ8IZF0 1738 aa12.13□□□□□ -0.47
SUB1-209ENST00000511615 IL16Q14005 1332 aa12.13□□□□□ -0.47
SUB1-209ENST00000511615 FAM161AQ3B820 660 aa12.13□□□□□ -0.47
SUB1-209ENST00000511615 NGDNQ8NEJ9 315 aaKnown RBP12.13□□□□□ -0.47
SUB1-209ENST00000511615 PMFBP1Q8TBY8 1022 aa12.13□□□□□ -0.47
SUB1-209ENST00000511615 CLUAP1Q96AJ1 413 aa12.13□□□□□ -0.47
SUB1-209ENST00000511615 C1orf167Q5SNV9 1468 aa12.12□□□□□ -0.47
SUB1-209ENST00000511615 MSH6P52701 1360 aa12.11□□□□□ -0.47
SUB1-209ENST00000511615 USP31Q70CQ4 1352 aa12.11□□□□□ -0.47
SUB1-209ENST00000511615 ESCO1Q5FWF5 840 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 158.2 ms