RNA–Protein interactions for RNA: ENST00000511214.1

SNF8-210, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-210ENST00000511214 VGFO15240 615 aaPredicted RBP11.49□□□□□ -0.57
SNF8-210ENST00000511214 IPO8O15397 1037 aaKnown RBP11.49□□□□□ -0.57
SNF8-210ENST00000511214 BRPF1P55201 1214 aaPredicted RBP11.49□□□□□ -0.57
SNF8-210ENST00000511214 SNX21Q969T3 373 aa11.49□□□□□ -0.57
SNF8-210ENST00000511214 SLKQ9H2G2 1235 aaPredicted RBP11.49□□□□□ -0.57
SNF8-210ENST00000511214 CIZ1Q9ULV3 898 aaPredicted RBP11.49□□□□□ -0.57
SNF8-210ENST00000511214 RRP7AQ9Y3A4 280 aaKnown RBP11.49□□□□□ -0.57
SNF8-210ENST00000511214 KIF16BQ96L93 1317 aa11.49□□□□□ -0.57
SNF8-210ENST00000511214 ARHGAP31Q2M1Z3 1444 aa11.49□□□□□ -0.57
SNF8-210ENST00000511214 POGZQ7Z3K3 1410 aa11.49□□□□□ -0.57
SNF8-210ENST00000511214 NCOA3Q9Y6Q9 1424 aa11.49□□□□□ -0.57
SNF8-210ENST00000511214 NEXMIFQ5QGS0 1516 aa11.49□□□□□ -0.57
SNF8-210ENST00000511214 FRMPD1Q5SYB0 1578 aa11.49□□□□□ -0.57
SNF8-210ENST00000511214 REREQ9P2R6 1566 aa11.49□□□□□ -0.57
SNF8-210ENST00000511214 CAMSAP1Q5T5Y3 1602 aa11.49□□□□□ -0.57
SNF8-210ENST00000511214 GOLGA6L3A6NEY3 463 aa11.48□□□□□ -0.57
SNF8-210ENST00000511214 DDX11L8A8MPP1 907 aa11.48□□□□□ -0.57
SNF8-210ENST00000511214 U2AF1L5P0DN76 240 aaPredicted RBP11.48□□□□□ -0.57
SNF8-210ENST00000511214 PRKCSHP14314 528 aaPredicted RBP11.48□□□□□ -0.57
SNF8-210ENST00000511214 U2AF1Q01081 240 aaKnown RBP eCLIP11.48□□□□□ -0.57
SNF8-210ENST00000511214 ALDH1L2Q3SY69 923 aa11.48□□□□□ -0.57
SNF8-210ENST00000511214 PLEKHF1Q96S99 279 aa11.48□□□□□ -0.57
SNF8-210ENST00000511214 U3KPZ7 1027 aaPredicted RBP11.48□□□□□ -0.57
SNF8-210ENST00000511214 ATAD2Q6PL18 1390 aa11.48□□□□□ -0.57
SNF8-210ENST00000511214 ASXL2Q76L83 1435 aa11.48□□□□□ -0.57
SNF8-210ENST00000511214 CDC42BPGQ6DT37 1551 aa11.48□□□□□ -0.57
SNF8-210ENST00000511214 CLTCQ00610 1675 aaKnown RBP11.47□□□□□ -0.57
SNF8-210ENST00000511214 PPIP5K1Q6PFW1 1433 aa11.47□□□□□ -0.57
SNF8-210ENST00000511214 TMPOP42166 694 aaKnown RBP11.47□□□□□ -0.57
SNF8-210ENST00000511214 RBM25P49756 843 aaKnown RBP11.47□□□□□ -0.57
SNF8-210ENST00000511214 NEUROD2Q15784 382 aa11.47□□□□□ -0.57
SNF8-210ENST00000511214 ATF7IPQ6VMQ6 1270 aa11.47□□□□□ -0.57
SNF8-210ENST00000511214 CD109Q6YHK3 1445 aa11.46□□□□□ -0.57
SNF8-210ENST00000511214 HSCBQ8IWL3 235 aa11.46□□□□□ -0.57
SNF8-210ENST00000511214 RNF39Q9H2S5 420 aa11.46□□□□□ -0.57
SNF8-210ENST00000511214 SMC4Q9NTJ3 1288 aa11.46□□□□□ -0.57
SNF8-210ENST00000511214 TNNQ9UQP3 1299 aa11.46□□□□□ -0.57
SNF8-210ENST00000511214 PNPLA6Q8IY17 1366 aa11.45□□□□□ -0.58
SNF8-210ENST00000511214 TRIM27P14373 513 aa11.45□□□□□ -0.58
SNF8-210ENST00000511214 MRE11P49959 708 aa11.45□□□□□ -0.58
SNF8-210ENST00000511214 CFAP44Q96MT7 982 aa11.45□□□□□ -0.58
SNF8-210ENST00000511214 MYCNP04198 464 aaPredicted RBP11.44□□□□□ -0.58
SNF8-210ENST00000511214 DDIT3P35638 169 aa11.44□□□□□ -0.58
SNF8-210ENST00000511214 TNNT2P45379 298 aaPredicted RBP11.44□□□□□ -0.58
SNF8-210ENST00000511214 EXOSC9Q06265 439 aaKnown RBP11.44□□□□□ -0.58
SNF8-210ENST00000511214 ZBTB40Q9NUA8 1239 aa11.44□□□□□ -0.58
SNF8-210ENST00000511214 TRIM35Q9UPQ4 493 aa11.44□□□□□ -0.58
SNF8-210ENST00000511214 PIK3R4Q99570 1358 aa11.43□□□□□ -0.58
SNF8-210ENST00000511214 CHGAP10645 457 aaKnown RBP11.43□□□□□ -0.58
SNF8-210ENST00000511214 NUCB1Q02818 461 aa11.43□□□□□ -0.58
SNF8-210ENST00000511214 SKOR2Q2VWA4 1001 aaPredicted RBP11.43□□□□□ -0.58
SNF8-210ENST00000511214 SSH1Q8WYL5 1049 aa11.43□□□□□ -0.58
SNF8-210ENST00000511214 ARHGAP45Q92619 1136 aa11.43□□□□□ -0.58
SNF8-210ENST00000511214 ZNF692Q9BU19 519 aaPredicted RBP11.43□□□□□ -0.58
SNF8-210ENST00000511214 BCL2L13Q9BXK5 485 aa11.43□□□□□ -0.58
SNF8-210ENST00000511214 TERF2IPQ9NYB0 399 aa11.43□□□□□ -0.58
SNF8-210ENST00000511214 A0A1W2PP64 1363 aa11.42□□□□□ -0.58
SNF8-210ENST00000511214 TRAK2O60296 914 aa11.42□□□□□ -0.58
SNF8-210ENST00000511214 CALD1Q05682 793 aaKnown RBP11.42□□□□□ -0.58
SNF8-210ENST00000511214 ITPRIPQ8IWB1 547 aa11.42□□□□□ -0.58
SNF8-210ENST00000511214 GCC1Q96CN9 775 aa11.42□□□□□ -0.58
SNF8-210ENST00000511214 NEO1Q92859 1461 aa11.42□□□□□ -0.58
SNF8-210ENST00000511214 FCHSD2O94868 740 aa11.41□□□□□ -0.58
SNF8-210ENST00000511214 XRCC6P12956 609 aaKnown RBP eCLIP11.41□□□□□ -0.58
SNF8-210ENST00000511214 CLCN1P35523 988 aa11.41□□□□□ -0.58
SNF8-210ENST00000511214 MFAP1P55081 439 aaKnown RBP11.41□□□□□ -0.58
SNF8-210ENST00000511214 BMP2KLQ5H9B9 411 aa11.41□□□□□ -0.58
SNF8-210ENST00000511214 SLC52A1Q9NWF4 448 aa11.41□□□□□ -0.58
SNF8-210ENST00000511214 NOB1Q9ULX3 412 aaKnown RBP11.41□□□□□ -0.58
SNF8-210ENST00000511214 KIF24Q5T7B8 1368 aa11.41□□□□□ -0.58
SNF8-210ENST00000511214 PTPRMP28827 1452 aa11.4□□□□□ -0.58
SNF8-210ENST00000511214 DIAPH1O60610 1272 aaKnown RBP11.4□□□□□ -0.58
SNF8-210ENST00000511214 TMEM132EQ6IEE7 984 aa11.4□□□□□ -0.58
SNF8-210ENST00000511214 UBE2Q2Q8WVN8 375 aa11.4□□□□□ -0.58
SNF8-210ENST00000511214 GBP4Q96PP9 640 aa11.4□□□□□ -0.58
SNF8-210ENST00000511214 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.4□□□□□ -0.58
SNF8-210ENST00000511214 PTCH1Q13635 1447 aa11.4□□□□□ -0.58
SNF8-210ENST00000511214 SIGLEC1Q9BZZ2 1709 aa11.4□□□□□ -0.58
SNF8-210ENST00000511214 CD163L1Q9NR16 1453 aa11.39□□□□□ -0.59
SNF8-210ENST00000511214 CHD1LQ86WJ1 897 aa11.39□□□□□ -0.59
SNF8-210ENST00000511214 TMEM57Q8N5G2 664 aa11.39□□□□□ -0.59
SNF8-210ENST00000511214 TSR2Q969E8 191 aaKnown RBP11.39□□□□□ -0.59
SNF8-210ENST00000511214 RRAGDQ9NQL2 400 aaPredicted RBP11.39□□□□□ -0.59
SNF8-210ENST00000511214 FAM135BQ49AJ0 1406 aa11.38□□□□□ -0.59
SNF8-210ENST00000511214 U2SURPO15042 1029 aaKnown RBP11.38□□□□□ -0.59
SNF8-210ENST00000511214 RIPK4P57078 832 aa11.38□□□□□ -0.59
SNF8-210ENST00000511214 CLEC17AQ6ZS10 378 aa11.38□□□□□ -0.59
SNF8-210ENST00000511214 HDGFL2Q7Z4V5 671 aaPredicted RBP11.38□□□□□ -0.59
SNF8-210ENST00000511214 CABP2Q9NPB3 220 aa11.38□□□□□ -0.59
SNF8-210ENST00000511214 DLC1Q96QB1 1528 aa11.38□□□□□ -0.59
SNF8-210ENST00000511214 KIF20BQ96Q89 1820 aa11.37□□□□□ -0.59
SNF8-210ENST00000511214 FYB1O15117 783 aa11.37□□□□□ -0.59
SNF8-210ENST00000511214 RAB3GAP1Q15042 981 aa11.37□□□□□ -0.59
SNF8-210ENST00000511214 ATP7BP35670 1465 aa11.37□□□□□ -0.59
SNF8-210ENST00000511214 GGT6Q6P531 493 aa11.36□□□□□ -0.59
SNF8-210ENST00000511214 GRPEL1Q9HAV7 217 aa11.36□□□□□ -0.59
SNF8-210ENST00000511214 IBTKQ9P2D0 1353 aaPredicted RBP11.36□□□□□ -0.59
SNF8-210ENST00000511214 DIP2CQ9Y2E4 1556 aa11.36□□□□□ -0.59
SNF8-210ENST00000511214 YTHDC2Q9H6S0 1430 aaKnown RBP11.35□□□□□ -0.59
SNF8-210ENST00000511214 ARHGEF40Q8TER5 1519 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms