RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 CSPP1Q1MSJ5 1256 aa11.15□□□□□ -0.62
GYPB-212ENST00000511198 PTCRAQ6ISU1 281 aaPredicted RBP11.15□□□□□ -0.62
GYPB-212ENST00000511198 FOXC1Q12948 553 aa11.14□□□□□ -0.63
GYPB-212ENST00000511198 QPCTQ16769 361 aa11.14□□□□□ -0.63
GYPB-212ENST00000511198 PTPRNQ16849 979 aa11.14□□□□□ -0.63
GYPB-212ENST00000511198 RSPH6AQ9H0K4 717 aa11.14□□□□□ -0.63
GYPB-212ENST00000511198 ZNF608Q9ULD9 1512 aaPredicted RBP11.14□□□□□ -0.63
GYPB-212ENST00000511198 PLEKHG3A1L390 1219 aa11.13□□□□□ -0.63
GYPB-212ENST00000511198 LILRB3O75022 631 aa11.13□□□□□ -0.63
GYPB-212ENST00000511198 CCNYL3P0C7X3 344 aa11.13□□□□□ -0.63
GYPB-212ENST00000511198 CLK2P49760 499 aaKnown RBP11.13□□□□□ -0.63
GYPB-212ENST00000511198 TPRNQ4KMQ1 711 aa11.12□□□□□ -0.63
GYPB-212ENST00000511198 DDRGK1Q96HY6 314 aa11.12□□□□□ -0.63
GYPB-212ENST00000511198 POLR3EQ9NVU0 708 aa11.12□□□□□ -0.63
GYPB-212ENST00000511198 EVA1BQ9NVM1 165 aa11.11□□□□□ -0.63
GYPB-212ENST00000511198 TRAF7Q6Q0C0 670 aa11.1□□□□□ -0.63
GYPB-212ENST00000511198 LYPD8Q6UX82 237 aa11.1□□□□□ -0.63
GYPB-212ENST00000511198 ERCC6L2Q5T890 1561 aa11.09□□□□□ -0.63
GYPB-212ENST00000511198 SKOR1P84550 965 aa11.09□□□□□ -0.63
GYPB-212ENST00000511198 RTL5Q5HYW3 569 aaPredicted RBP11.09□□□□□ -0.63
GYPB-212ENST00000511198 TOR4AQ9NXH8 423 aa11.09□□□□□ -0.63
GYPB-212ENST00000511198 URB2Q14146 1524 aaKnown RBP11.09□□□□□ -0.63
GYPB-212ENST00000511198 NUTM2BA6NNL0 878 aaPredicted RBP11.08□□□□□ -0.64
GYPB-212ENST00000511198 NUTM2EB1AL46 878 aaPredicted RBP11.08□□□□□ -0.64
GYPB-212ENST00000511198 WNT7AO00755 349 aa11.08□□□□□ -0.64
GYPB-212ENST00000511198 KCNH2Q12809 1159 aa11.08□□□□□ -0.64
GYPB-212ENST00000511198 SKIV2LQ15477 1246 aaKnown RBP11.08□□□□□ -0.64
GYPB-212ENST00000511198 SH3D19Q5HYK7 790 aa11.08□□□□□ -0.64
GYPB-212ENST00000511198 NUTM2DQ5VT03 806 aaPredicted RBP11.08□□□□□ -0.64
GYPB-212ENST00000511198 NUTM2AQ8IVF1 878 aaPredicted RBP11.08□□□□□ -0.64
GYPB-212ENST00000511198 FANCD2Q9BXW9 1451 aa11.07□□□□□ -0.64
GYPB-212ENST00000511198 CHD1O14646 1710 aa11.07□□□□□ -0.64
GYPB-212ENST00000511198 PER1O15534 1290 aaPredicted RBP11.06□□□□□ -0.64
GYPB-212ENST00000511198 DGAT1O75907 488 aa11.06□□□□□ -0.64
GYPB-212ENST00000511198 WNT7BP56706 349 aa11.06□□□□□ -0.64
GYPB-212ENST00000511198 UNC93B1Q9H1C4 597 aa11.06□□□□□ -0.64
GYPB-212ENST00000511198 NEUROD2Q15784 382 aa11.05□□□□□ -0.64
GYPB-212ENST00000511198 PKDCCQ504Y2 493 aa11.05□□□□□ -0.64
GYPB-212ENST00000511198 FBXO31Q5XUX0 539 aaPredicted RBP11.05□□□□□ -0.64
GYPB-212ENST00000511198 PROCA1Q8NCQ7 364 aaPredicted RBP11.05□□□□□ -0.64
GYPB-212ENST00000511198 MRGPRX2Q96LB1 330 aa11.05□□□□□ -0.64
GYPB-212ENST00000511198 F12P00748 615 aaPredicted RBP11.04□□□□□ -0.64
GYPB-212ENST00000511198 RC3H1Q5TC82 1133 aaKnown RBP11.04□□□□□ -0.64
GYPB-212ENST00000511198 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.04□□□□□ -0.64
GYPB-212ENST00000511198 HECW2Q9P2P5 1572 aa11.03□□□□□ -0.64
GYPB-212ENST00000511198 FAM187AA6NFU0 413 aa11.03□□□□□ -0.64
GYPB-212ENST00000511198 BRPF1P55201 1214 aaPredicted RBP11.03□□□□□ -0.64
GYPB-212ENST00000511198 CYP4X1Q8N118 509 aa11.03□□□□□ -0.64
GYPB-212ENST00000511198 PEG3Q9GZU2 1588 aa11.03□□□□□ -0.64
GYPB-212ENST00000511198 SH3BP2P78314 561 aa11.02□□□□□ -0.65
GYPB-212ENST00000511198 MYT1Q01538 1121 aa11.02□□□□□ -0.65
GYPB-212ENST00000511198 TSC1Q92574 1164 aa11.02□□□□□ -0.65
GYPB-212ENST00000511198 BAP1Q92560 729 aa11.01□□□□□ -0.65
GYPB-212ENST00000511198 MAP10Q9P2G4 905 aa11.01□□□□□ -0.65
GYPB-212ENST00000511198 CTHP32929 405 aa11□□□□□ -0.65
GYPB-212ENST00000511198 SNIP1Q8TAD8 396 aaKnown RBP11□□□□□ -0.65
GYPB-212ENST00000511198 PPP2R2DQ66LE6 453 aa10.99□□□□□ -0.65
GYPB-212ENST00000511198 TTC24A2A3L6 582 aaPredicted RBP10.98□□□□□ -0.65
GYPB-212ENST00000511198 LINC01559Q495D7 138 aa10.98□□□□□ -0.65
GYPB-212ENST00000511198 HELBQ8NG08 1087 aaPredicted RBP10.98□□□□□ -0.65
GYPB-212ENST00000511198 SIAH2O43255 324 aa10.97□□□□□ -0.65
GYPB-212ENST00000511198 AVPP01185 164 aa10.97□□□□□ -0.65
GYPB-212ENST00000511198 SMPD1P17405 629 aa10.97□□□□□ -0.65
GYPB-212ENST00000511198 CTDSPL2Q05D32 466 aa10.97□□□□□ -0.65
GYPB-212ENST00000511198 ZNF511Q8NB15 262 aa10.97□□□□□ -0.65
GYPB-212ENST00000511198 IL27Q8NEV9 243 aa10.97□□□□□ -0.65
GYPB-212ENST00000511198 IFT140Q96RY7 1462 aa10.97□□□□□ -0.65
GYPB-212ENST00000511198 J3QL48 77 aa10.96□□□□□ -0.65
GYPB-212ENST00000511198 GOPCQ9HD26 462 aa10.96□□□□□ -0.65
GYPB-212ENST00000511198 EHBP1Q8NDI1 1231 aa10.95□□□□□ -0.66
GYPB-212ENST00000511198 EIF4G3O43432 1585 aaKnown RBP10.94□□□□□ -0.66
GYPB-212ENST00000511198 DISP3Q9P2K9 1392 aa10.94□□□□□ -0.66
GYPB-212ENST00000511198 AAASQ9NRG9 546 aa10.94□□□□□ -0.66
GYPB-212ENST00000511198 CLASP1Q7Z460 1538 aa10.94□□□□□ -0.66
GYPB-212ENST00000511198 KIF13AQ9H1H9 1805 aa10.93□□□□□ -0.66
GYPB-212ENST00000511198 CRIPAKQ8N1N5 446 aa10.93□□□□□ -0.66
GYPB-212ENST00000511198 ATP1B4Q9UN42 357 aaPredicted RBP10.93□□□□□ -0.66
GYPB-212ENST00000511198 ST8SIA5O15466 376 aa10.92□□□□□ -0.66
GYPB-212ENST00000511198 PRKCSHP14314 528 aaPredicted RBP10.92□□□□□ -0.66
GYPB-212ENST00000511198 SYNJ2O15056 1496 aa10.92□□□□□ -0.66
GYPB-212ENST00000511198 LRRN4Q8WUT4 740 aa10.91□□□□□ -0.66
GYPB-212ENST00000511198 FOXJ1Q92949 421 aa10.91□□□□□ -0.66
GYPB-212ENST00000511198 AQRO60306 1485 aaKnown RBP eCLIP10.91□□□□□ -0.66
GYPB-212ENST00000511198 GAPVD1Q14C86 1478 aa10.91□□□□□ -0.66
GYPB-212ENST00000511198 ALDH1A1P00352 501 aa10.89□□□□□ -0.67
GYPB-212ENST00000511198 VARSP26640 1264 aaKnown RBP10.89□□□□□ -0.67
GYPB-212ENST00000511198 HPS1Q92902 700 aa10.89□□□□□ -0.67
GYPB-212ENST00000511198 RFC5P40937 340 aa10.88□□□□□ -0.67
GYPB-212ENST00000511198 SMCPP49901 116 aaPredicted RBP10.88□□□□□ -0.67
GYPB-212ENST00000511198 CTC1Q2NKJ3 1217 aa10.88□□□□□ -0.67
GYPB-212ENST00000511198 C4orf48Q5BLP8 95 aa10.88□□□□□ -0.67
GYPB-212ENST00000511198 PCMTD1Q96MG8 357 aaPredicted RBP10.88□□□□□ -0.67
GYPB-212ENST00000511198 AP1G2O75843 785 aa10.87□□□□□ -0.67
GYPB-212ENST00000511198 MPNDQ8N594 471 aa10.87□□□□□ -0.67
GYPB-212ENST00000511198 DACH1Q9UI36 760 aa10.87□□□□□ -0.67
GYPB-212ENST00000511198 ARMC2Q8NEN0 867 aa10.86□□□□□ -0.67
GYPB-212ENST00000511198 TLL2Q9Y6L7 1015 aa10.86□□□□□ -0.67
GYPB-212ENST00000511198 CFTRP13569 1480 aa10.86□□□□□ -0.67
GYPB-212ENST00000511198 POTECB2RU33 542 aa10.85□□□□□ -0.67
GYPB-212ENST00000511198 AXIN1O15169 862 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms