RNA–Protein interactions for RNA: ENST00000509967.6

TRIO-214, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2 BASIC

Gene TRIO, Length 4,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-214ENST00000509967 GNAI2P04899 355 aa11.15□□□□□ -0.62
TRIO-214ENST00000509967 ALDH1L2Q3SY69 923 aa11.15□□□□□ -0.62
TRIO-214ENST00000509967 CFAP70Q5T0N1 1121 aa11.14□□□□□ -0.63
TRIO-214ENST00000509967 RPAP2Q8IXW5 612 aaPredicted RBP11.14□□□□□ -0.63
TRIO-214ENST00000509967 FOXD4L1Q9NU39 408 aa11.14□□□□□ -0.63
TRIO-214ENST00000509967 XBP1P17861 261 aa11.14□□□□□ -0.63
TRIO-214ENST00000509967 ZNF330Q9Y3S2 320 aaPredicted RBP11.14□□□□□ -0.63
TRIO-214ENST00000509967 ELL2O00472 640 aaPredicted RBP11.14□□□□□ -0.63
TRIO-214ENST00000509967 PIP4K2AP48426 406 aaPredicted RBP11.14□□□□□ -0.63
TRIO-214ENST00000509967 TWISTNBQ3B726 338 aaPredicted RBP11.14□□□□□ -0.63
TRIO-214ENST00000509967 ATF7IPQ6VMQ6 1270 aa11.14□□□□□ -0.63
TRIO-214ENST00000509967 LNPKQ9C0E8 428 aa11.14□□□□□ -0.63
TRIO-214ENST00000509967 PDZRN3Q9UPQ7 1066 aa11.14□□□□□ -0.63
TRIO-214ENST00000509967 SCAF11Q99590 1463 aaKnown RBP11.14□□□□□ -0.63
TRIO-214ENST00000509967 EIF2AK4Q9P2K8 1649 aaKnown RBP11.14□□□□□ -0.63
TRIO-214ENST00000509967 BICD2Q8TD16 824 aa11.14□□□□□ -0.63
TRIO-214ENST00000509967 PANK1Q8TE04 598 aa11.14□□□□□ -0.63
TRIO-214ENST00000509967 PLEKHH1Q9ULM0 1364 aa11.14□□□□□ -0.63
TRIO-214ENST00000509967 GTF2E1P29083 439 aaPredicted RBP11.13□□□□□ -0.63
TRIO-214ENST00000509967 TOMM22Q9NS69 142 aa11.13□□□□□ -0.63
TRIO-214ENST00000509967 SLC4A3P48751 1232 aa11.13□□□□□ -0.63
TRIO-214ENST00000509967 NOL8Q76FK4 1167 aaKnown RBP11.13□□□□□ -0.63
TRIO-214ENST00000509967 BRMS1Q9HCU9 246 aa11.13□□□□□ -0.63
TRIO-214ENST00000509967 TAOK2Q9UL54 1235 aa11.13□□□□□ -0.63
TRIO-214ENST00000509967 NKTRP30414 1462 aaKnown RBP11.13□□□□□ -0.63
TRIO-214ENST00000509967 RTEL1-TNFRSF6BF6WH68 1400 aa11.13□□□□□ -0.63
TRIO-214ENST00000509967 FRAT2O75474 233 aaPredicted RBP11.13□□□□□ -0.63
TRIO-214ENST00000509967 TNNT3P45378 269 aaPredicted RBP11.13□□□□□ -0.63
TRIO-214ENST00000509967 SETQ01105 290 aaPredicted RBP11.13□□□□□ -0.63
TRIO-214ENST00000509967 SLFN5Q08AF3 891 aa11.13□□□□□ -0.63
TRIO-214ENST00000509967 CAVIN1Q6NZI2 390 aaKnown RBP11.13□□□□□ -0.63
TRIO-214ENST00000509967 GGNBP2Q9H3C7 697 aa11.13□□□□□ -0.63
TRIO-214ENST00000509967 BRPF3Q9ULD4 1205 aa11.13□□□□□ -0.63
TRIO-214ENST00000509967 MARCH6O60337 910 aa11.12□□□□□ -0.63
TRIO-214ENST00000509967 NASPP49321 788 aaPredicted RBP11.12□□□□□ -0.63
TRIO-214ENST00000509967 RALYLQ86SE5 291 aaKnown RBP11.12□□□□□ -0.63
TRIO-214ENST00000509967 ZSCAN31Q96LW9 406 aaPredicted RBP11.12□□□□□ -0.63
TRIO-214ENST00000509967 UGGT2Q9NYU1 1516 aa11.12□□□□□ -0.63
TRIO-214ENST00000509967 ZNF396Q96N95 335 aaPredicted RBP11.12□□□□□ -0.63
TRIO-214ENST00000509967 RALGAPBQ86X10 1494 aa11.12□□□□□ -0.63
TRIO-214ENST00000509967 CABP2Q9NPB3 220 aa11.12□□□□□ -0.63
TRIO-214ENST00000509967 WDR33Q9C0J8 1336 aaKnown RBP11.12□□□□□ -0.63
TRIO-214ENST00000509967 TRAK2O60296 914 aa11.11□□□□□ -0.63
TRIO-214ENST00000509967 PRKAR2BP31323 418 aa11.11□□□□□ -0.63
TRIO-214ENST00000509967 EXOSC9Q06265 439 aaKnown RBP11.11□□□□□ -0.63
TRIO-214ENST00000509967 TCOF1Q13428 1488 aaKnown RBP11.11□□□□□ -0.63
TRIO-214ENST00000509967 G3V3G9 751 aa11.11□□□□□ -0.63
TRIO-214ENST00000509967 DCAF8Q5TAQ9 597 aa11.11□□□□□ -0.63
TRIO-214ENST00000509967 CFAP43Q8NDM7 1665 aa11.11□□□□□ -0.63
TRIO-214ENST00000509967 CDR1P51861 262 aa11.11□□□□□ -0.63
TRIO-214ENST00000509967 SART3Q15020 963 aaKnown RBP11.1□□□□□ -0.63
TRIO-214ENST00000509967 MCTP1Q6DN14 999 aa11.1□□□□□ -0.63
TRIO-214ENST00000509967 THEMISQ8N1K5 641 aaPredicted RBP11.1□□□□□ -0.63
TRIO-214ENST00000509967 AFAP1Q8N556 730 aa11.1□□□□□ -0.63
TRIO-214ENST00000509967 IL16Q14005 1332 aa11.1□□□□□ -0.63
TRIO-214ENST00000509967 EVA1CP58658 441 aa11.1□□□□□ -0.63
TRIO-214ENST00000509967 JMYQ8N9B5 988 aa11.1□□□□□ -0.63
TRIO-214ENST00000509967 K7ELQ4 463 aaPredicted RBP11.1□□□□□ -0.63
TRIO-214ENST00000509967 EIF2S2P20042 333 aaKnown RBP11.1□□□□□ -0.63
TRIO-214ENST00000509967 OLFM4Q6UX06 510 aa11.1□□□□□ -0.63
TRIO-214ENST00000509967 RIC3Q7Z5B4 369 aa11.1□□□□□ -0.63
TRIO-214ENST00000509967 PUS7Q96PZ0 661 aaKnown RBP11.1□□□□□ -0.63
TRIO-214ENST00000509967 TSPY26PQ9H489 355 aa11.1□□□□□ -0.63
TRIO-214ENST00000509967 SHANK2Q9UPX8 1470 aa11.09□□□□□ -0.63
TRIO-214ENST00000509967 KRT32Q14532 448 aa11.09□□□□□ -0.63
TRIO-214ENST00000509967 ARHGEF12Q9NZN5 1544 aa11.09□□□□□ -0.63
TRIO-214ENST00000509967 NBPF1Q3BBV0 1214 aa11.09□□□□□ -0.63
TRIO-214ENST00000509967 ERCC4Q92889 916 aaPredicted RBP11.09□□□□□ -0.63
TRIO-214ENST00000509967 CTTNBP2Q8WZ74 1663 aa11.09□□□□□ -0.63
TRIO-214ENST00000509967 NSD3Q9BZ95 1437 aa11.09□□□□□ -0.63
TRIO-214ENST00000509967 VPS37CA5D8V6 355 aaPredicted RBP11.08□□□□□ -0.64
TRIO-214ENST00000509967 CLSTN1O94985 981 aa11.08□□□□□ -0.64
TRIO-214ENST00000509967 NFE2L2Q16236 605 aa11.08□□□□□ -0.64
TRIO-214ENST00000509967 LRRCC1Q9C099 1032 aa11.08□□□□□ -0.64
TRIO-214ENST00000509967 ATF3P18847 181 aa11.08□□□□□ -0.64
TRIO-214ENST00000509967 PRAM1Q96QH2 718 aa11.08□□□□□ -0.64
TRIO-214ENST00000509967 IFT57Q9NWB7 429 aa11.08□□□□□ -0.64
TRIO-214ENST00000509967 TBC1D2BQ9UPU7 963 aa11.08□□□□□ -0.64
TRIO-214ENST00000509967 ARHGEF11O15085 1522 aa11.08□□□□□ -0.64
TRIO-214ENST00000509967 CD109Q6YHK3 1445 aa11.08□□□□□ -0.64
TRIO-214ENST00000509967 DUOX2Q9NRD8 1548 aa11.08□□□□□ -0.64
TRIO-214ENST00000509967 CHD1LQ86WJ1 897 aa11.08□□□□□ -0.64
TRIO-214ENST00000509967 TXLNBQ8N3L3 684 aa11.08□□□□□ -0.64
TRIO-214ENST00000509967 RAPGEF6Q8TEU7 1601 aa11.07□□□□□ -0.64
TRIO-214ENST00000509967 ZSCAN25Q6NSZ9 544 aa11.07□□□□□ -0.64
TRIO-214ENST00000509967 INSRP06213 1382 aa11.07□□□□□ -0.64
TRIO-214ENST00000509967 NLRP6P59044 892 aa11.07□□□□□ -0.64
TRIO-214ENST00000509967 CDCA7LQ96GN5 454 aa11.07□□□□□ -0.64
TRIO-214ENST00000509967 CDK19Q9BWU1 502 aa11.07□□□□□ -0.64
TRIO-214ENST00000509967 DACH1Q9UI36 760 aa11.07□□□□□ -0.64
TRIO-214ENST00000509967 LRPPRCP42704 1394 aaKnown RBP11.07□□□□□ -0.64
TRIO-214ENST00000509967 RAB11FIP3O75154 756 aa11.07□□□□□ -0.64
TRIO-214ENST00000509967 NOB1Q9ULX3 412 aaKnown RBP11.07□□□□□ -0.64
TRIO-214ENST00000509967 EIF4G3O43432 1585 aaKnown RBP11.07□□□□□ -0.64
TRIO-214ENST00000509967 HMOX1P09601 288 aa11.06□□□□□ -0.64
TRIO-214ENST00000509967 FSD1Q9BTV5 496 aa11.06□□□□□ -0.64
TRIO-214ENST00000509967 NFXL1Q6ZNB6 911 aa11.06□□□□□ -0.64
TRIO-214ENST00000509967 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.06□□□□□ -0.64
TRIO-214ENST00000509967 ANKRD36BQ8N2N9 1353 aa11.06□□□□□ -0.64
TRIO-214ENST00000509967 KINO60870 393 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 290.4 ms