RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-222ENST00000508238 MEX3CQ5U5Q3 659 aaKnown RBP11.61□□□□□ -0.55
UBE2D3-222ENST00000508238 NPHP3Q7Z494 1330 aa11.6□□□□□ -0.55
UBE2D3-222ENST00000508238 DLC1Q96QB1 1528 aa11.6□□□□□ -0.55
UBE2D3-222ENST00000508238 ADGRB1O14514 1584 aa11.6□□□□□ -0.55
UBE2D3-222ENST00000508238 NUTM2BA6NNL0 878 aaPredicted RBP11.59□□□□□ -0.55
UBE2D3-222ENST00000508238 NUTM2EB1AL46 878 aaPredicted RBP11.59□□□□□ -0.55
UBE2D3-222ENST00000508238 FOXO3O43524 673 aa11.59□□□□□ -0.55
UBE2D3-222ENST00000508238 CD44P16070 742 aaKnown RBP11.59□□□□□ -0.55
UBE2D3-222ENST00000508238 NUTM2AQ8IVF1 878 aaPredicted RBP11.59□□□□□ -0.55
UBE2D3-222ENST00000508238 PRAM1Q96QH2 718 aa11.59□□□□□ -0.55
UBE2D3-222ENST00000508238 KDM2AQ9Y2K7 1162 aa11.59□□□□□ -0.55
UBE2D3-222ENST00000508238 SLC24A1O60721 1099 aa11.58□□□□□ -0.56
UBE2D3-222ENST00000508238 FMN2Q9NZ56 1722 aa11.57□□□□□ -0.56
UBE2D3-222ENST00000508238 PXDNQ92626 1479 aa11.57□□□□□ -0.56
UBE2D3-222ENST00000508238 POGKQ9P215 609 aa11.57□□□□□ -0.56
UBE2D3-222ENST00000508238 ZRANB1Q9UGI0 708 aa11.57□□□□□ -0.56
UBE2D3-222ENST00000508238 TAOK2Q9UL54 1235 aa11.57□□□□□ -0.56
UBE2D3-222ENST00000508238 NUTM2FA1L443 756 aa11.56□□□□□ -0.56
UBE2D3-222ENST00000508238 GABBR2O75899 941 aa11.56□□□□□ -0.56
UBE2D3-222ENST00000508238 BBXQ8WY36 941 aaPredicted RBP11.56□□□□□ -0.56
UBE2D3-222ENST00000508238 AFF2P51816 1311 aa11.56□□□□□ -0.56
UBE2D3-222ENST00000508238 RXRBP28702 533 aa11.55□□□□□ -0.56
UBE2D3-222ENST00000508238 TRAK1Q9UPV9 953 aa11.55□□□□□ -0.56
UBE2D3-222ENST00000508238 COL22A1Q8NFW1 1626 aaPredicted RBP11.55□□□□□ -0.56
UBE2D3-222ENST00000508238 ANKARQ7Z5J8 1434 aa11.54□□□□□ -0.56
UBE2D3-222ENST00000508238 SAFB2Q14151 953 aaKnown RBP eCLIP11.54□□□□□ -0.56
UBE2D3-222ENST00000508238 FNBP4Q8N3X1 1017 aaPredicted RBP11.54□□□□□ -0.56
UBE2D3-222ENST00000508238 NGLY1Q96IV0 654 aa11.54□□□□□ -0.56
UBE2D3-222ENST00000508238 PHF8Q9UPP1 1060 aa11.54□□□□□ -0.56
UBE2D3-222ENST00000508238 SPATA31A3Q5VYP0 1347 aa11.54□□□□□ -0.56
UBE2D3-222ENST00000508238 KIF1AQ12756 1690 aa11.53□□□□□ -0.56
UBE2D3-222ENST00000508238 CDK12Q9NYV4 1490 aaPredicted RBP11.53□□□□□ -0.56
UBE2D3-222ENST00000508238 ADAMTS2O95450 1211 aa11.53□□□□□ -0.56
UBE2D3-222ENST00000508238 XPCQ01831 940 aaPredicted RBP11.53□□□□□ -0.56
UBE2D3-222ENST00000508238 KRT28Q7Z3Y7 464 aa11.53□□□□□ -0.56
UBE2D3-222ENST00000508238 C8orf37Q96NL8 207 aa11.53□□□□□ -0.56
UBE2D3-222ENST00000508238 RGPD8O14715 1765 aaPredicted RBP11.53□□□□□ -0.56
UBE2D3-222ENST00000508238 ADGRB2O60241 1585 aa11.53□□□□□ -0.56
UBE2D3-222ENST00000508238 PLCB2Q00722 1185 aa11.52□□□□□ -0.57
UBE2D3-222ENST00000508238 PSME1Q06323 249 aa11.52□□□□□ -0.57
UBE2D3-222ENST00000508238 QTRT2Q9H974 415 aaKnown RBP11.52□□□□□ -0.57
UBE2D3-222ENST00000508238 EIF3AQ14152 1382 aaKnown RBP11.52□□□□□ -0.57
UBE2D3-222ENST00000508238 KIAA1210Q9ULL0 1709 aa11.52□□□□□ -0.57
UBE2D3-222ENST00000508238 WASLO00401 505 aaPredicted RBP11.51□□□□□ -0.57
UBE2D3-222ENST00000508238 RBM6P78332 1123 aaKnown RBP11.51□□□□□ -0.57
UBE2D3-222ENST00000508238 ZNF467Q7Z7K2 595 aaPredicted RBP11.51□□□□□ -0.57
UBE2D3-222ENST00000508238 HS6ST3Q8IZP7 471 aa11.51□□□□□ -0.57
UBE2D3-222ENST00000508238 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.51□□□□□ -0.57
UBE2D3-222ENST00000508238 PCDHB8Q9UN66 801 aa11.51□□□□□ -0.57
UBE2D3-222ENST00000508238 PCDHB13Q9Y5F0 798 aa11.51□□□□□ -0.57
UBE2D3-222ENST00000508238 SBNO1A3KN83 1393 aa11.51□□□□□ -0.57
UBE2D3-222ENST00000508238 KIF12Q96FN5 646 aa11.5□□□□□ -0.57
UBE2D3-222ENST00000508238 MINK1Q8N4C8 1332 aaPredicted RBP11.5□□□□□ -0.57
UBE2D3-222ENST00000508238 STK25O00506 426 aa11.49□□□□□ -0.57
UBE2D3-222ENST00000508238 MAP3K13O43283 966 aa11.49□□□□□ -0.57
UBE2D3-222ENST00000508238 PHF12Q96QT6 1004 aa11.49□□□□□ -0.57
UBE2D3-222ENST00000508238 HIRIP3Q9BW71 556 aaPredicted RBP11.49□□□□□ -0.57
UBE2D3-222ENST00000508238 USP21Q9UK80 565 aa11.49□□□□□ -0.57
UBE2D3-222ENST00000508238 PRR36Q9H6K5 1346 aa11.49□□□□□ -0.57
UBE2D3-222ENST00000508238 USP32Q8NFA0 1604 aa11.49□□□□□ -0.57
UBE2D3-222ENST00000508238 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.48□□□□□ -0.57
UBE2D3-222ENST00000508238 NBPF1Q3BBV0 1214 aa11.48□□□□□ -0.57
UBE2D3-222ENST00000508238 L3MBTL2Q969R5 705 aa11.48□□□□□ -0.57
UBE2D3-222ENST00000508238 ZFP91Q96JP5 570 aaPredicted RBP11.48□□□□□ -0.57
UBE2D3-222ENST00000508238 TRPC5Q9UL62 973 aaPredicted RBP11.48□□□□□ -0.57
UBE2D3-222ENST00000508238 ARHGEF28Q8N1W1 1705 aaKnown RBP11.47□□□□□ -0.57
UBE2D3-222ENST00000508238 TULP4Q9NRJ4 1543 aa11.47□□□□□ -0.57
UBE2D3-222ENST00000508238 TNS3Q68CZ2 1445 aa11.47□□□□□ -0.57
UBE2D3-222ENST00000508238 ARHGEF10O15013 1369 aa11.47□□□□□ -0.57
UBE2D3-222ENST00000508238 ZNF579Q8NAF0 562 aaKnown RBP11.47□□□□□ -0.57
UBE2D3-222ENST00000508238 PMFBP1Q8TBY8 1022 aa11.47□□□□□ -0.57
UBE2D3-222ENST00000508238 SGIP1Q9BQI5 828 aa11.47□□□□□ -0.57
UBE2D3-222ENST00000508238 MARF1Q9Y4F3 1742 aaKnown RBP11.46□□□□□ -0.57
UBE2D3-222ENST00000508238 BCL9LQ86UU0 1499 aa11.46□□□□□ -0.57
UBE2D3-222ENST00000508238 GPRASP1Q5JY77 1395 aa11.46□□□□□ -0.57
UBE2D3-222ENST00000508238 NUDT16Q96DE0 195 aaKnown RBP11.46□□□□□ -0.57
UBE2D3-222ENST00000508238 ATRNO75882 1429 aa11.45□□□□□ -0.58
UBE2D3-222ENST00000508238 PAXIP1Q6ZW49 1069 aaPredicted RBP11.45□□□□□ -0.58
UBE2D3-222ENST00000508238 IFNL1Q8IU54 200 aa11.45□□□□□ -0.58
UBE2D3-222ENST00000508238 UPF1Q92900 1129 aaKnown RBP eCLIP11.45□□□□□ -0.58
UBE2D3-222ENST00000508238 SIN3AQ96ST3 1273 aa11.45□□□□□ -0.58
UBE2D3-222ENST00000508238 CDK19Q9BWU1 502 aa11.45□□□□□ -0.58
UBE2D3-222ENST00000508238 BCL11BQ9C0K0 894 aaPredicted RBP11.45□□□□□ -0.58
UBE2D3-222ENST00000508238 PDAP1Q13442 181 aaKnown RBP11.44□□□□□ -0.58
UBE2D3-222ENST00000508238 LHX8Q68G74 356 aa11.44□□□□□ -0.58
UBE2D3-222ENST00000508238 UNC5CLQ8IV45 518 aa11.44□□□□□ -0.58
UBE2D3-222ENST00000508238 STK24Q9Y6E0 443 aa11.44□□□□□ -0.58
UBE2D3-222ENST00000508238 SLIT2O94813 1529 aa11.44□□□□□ -0.58
UBE2D3-222ENST00000508238 PLEKHG3A1L390 1219 aa11.43□□□□□ -0.58
UBE2D3-222ENST00000508238 NGDNQ8NEJ9 315 aaKnown RBP11.43□□□□□ -0.58
UBE2D3-222ENST00000508238 CABLES1Q8TDN4 633 aa11.43□□□□□ -0.58
UBE2D3-222ENST00000508238 GJD4Q96KN9 370 aaPredicted RBP11.43□□□□□ -0.58
UBE2D3-222ENST00000508238 CFAP44Q96MT7 982 aa11.43□□□□□ -0.58
UBE2D3-222ENST00000508238 ATP7BP35670 1465 aa11.43□□□□□ -0.58
UBE2D3-222ENST00000508238 RGS12O14924 1447 aa11.43□□□□□ -0.58
UBE2D3-222ENST00000508238 CENPJQ9HC77 1338 aaPredicted RBP11.42□□□□□ -0.58
UBE2D3-222ENST00000508238 TRPM3Q9HCF6 1732 aaPredicted RBP11.42□□□□□ -0.58
UBE2D3-222ENST00000508238 POLR3AO14802 1390 aaPredicted RBP11.41□□□□□ -0.58
UBE2D3-222ENST00000508238 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.41□□□□□ -0.58
UBE2D3-222ENST00000508238 PSEN1P49768 467 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms