RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 HDGFL2Q7Z4V5 671 aaPredicted RBP14.02□□□□□ -0.16
LIN54-207ENST00000508171 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.02□□□□□ -0.165e-6■■■□□ 15.5
LIN54-207ENST00000508171 CLTCQ00610 1675 aaKnown RBP14.02□□□□□ -0.17
LIN54-207ENST00000508171 ARHGEF40Q8TER5 1519 aa14.02□□□□□ -0.17
LIN54-207ENST00000508171 ANKRD26Q9UPS8 1709 aa14.01□□□□□ -0.17
LIN54-207ENST00000508171 PPM1GO15355 546 aaPredicted RBP14.01□□□□□ -0.17
LIN54-207ENST00000508171 DAXXQ9UER7 740 aaPredicted RBP14.01□□□□□ -0.17
LIN54-207ENST00000508171 MAPK8IP3Q9UPT6 1336 aa14.01□□□□□ -0.17
LIN54-207ENST00000508171 DIAPH1O60610 1272 aaKnown RBP14.01□□□□□ -0.17
LIN54-207ENST00000508171 RIPK4P57078 832 aa14.01□□□□□ -0.17
LIN54-207ENST00000508171 PMFBP1Q8TBY8 1022 aa14.01□□□□□ -0.17
LIN54-207ENST00000508171 VIRMAQ69YN4 1812 aaKnown RBP14□□□□□ -0.17
LIN54-207ENST00000508171 ZKSCAN2Q63HK3 967 aa14□□□□□ -0.17
LIN54-207ENST00000508171 USP19O94966 1318 aa14□□□□□ -0.17
LIN54-207ENST00000508171 MVPQ14764 893 aaKnown RBP13.99□□□□□ -0.17
LIN54-207ENST00000508171 SSH1Q8WYL5 1049 aa13.99□□□□□ -0.17
LIN54-207ENST00000508171 SMC4Q9NTJ3 1288 aa13.99□□□□□ -0.17
LIN54-207ENST00000508171 DZIP1LQ8IYY4 767 aaKnown RBP13.99□□□□□ -0.17
LIN54-207ENST00000508171 USP35Q9P2H5 1018 aa13.99□□□□□ -0.17
LIN54-207ENST00000508171 PDZRN3Q9UPQ7 1066 aa13.99□□□□□ -0.17
LIN54-207ENST00000508171 MED14O60244 1454 aa13.99□□□□□ -0.17
LIN54-207ENST00000508171 AAMPQ13685 434 aa13.98□□□□□ -0.17
LIN54-207ENST00000508171 FTSJ3Q8IY81 847 aaKnown RBP13.98□□□□□ -0.17
LIN54-207ENST00000508171 PNPLA6Q8IY17 1366 aa13.98□□□□□ -0.17
LIN54-207ENST00000508171 A2ML1A8K2U0 1454 aa13.98□□□□□ -0.17
LIN54-207ENST00000508171 TRIM27P14373 513 aa13.98□□□□□ -0.17
LIN54-207ENST00000508171 KIF20BQ96Q89 1820 aa13.97□□□□□ -0.17
LIN54-207ENST00000508171 POLKQ9UBT6 870 aa13.97□□□□□ -0.17
LIN54-207ENST00000508171 DIP2BQ9P265 1576 aa13.97□□□□□ -0.17
LIN54-207ENST00000508171 MAP2P11137 1827 aaKnown RBP13.97□□□□□ -0.17
LIN54-207ENST00000508171 RWDD1Q9H446 243 aaPredicted RBP13.97□□□□□ -0.17
LIN54-207ENST00000508171 CT47B1P0C2W7 299 aaPredicted RBP13.96□□□□□ -0.17
LIN54-207ENST00000508171 NFKBIBQ15653 356 aa13.96□□□□□ -0.17
LIN54-207ENST00000508171 NOB1Q9ULX3 412 aaKnown RBP13.96□□□□□ -0.18
LIN54-207ENST00000508171 RIMS2Q9UQ26 1411 aa13.95□□□□□ -0.18
LIN54-207ENST00000508171 PRKAR2BP31323 418 aa13.95□□□□□ -0.18
LIN54-207ENST00000508171 NCKAP5LQ9HCH0 1330 aa13.94□□□□□ -0.18
LIN54-207ENST00000508171 FCHSD2O94868 740 aa13.94□□□□□ -0.18
LIN54-207ENST00000508171 HMOX1P09601 288 aa13.94□□□□□ -0.18
LIN54-207ENST00000508171 ZRANB1Q9UGI0 708 aa13.94□□□□□ -0.18
LIN54-207ENST00000508171 PPP6R1Q9UPN7 881 aa13.94□□□□□ -0.18
LIN54-207ENST00000508171 IL16Q14005 1332 aa13.94□□□□□ -0.18
LIN54-207ENST00000508171 ATF7IPQ6VMQ6 1270 aa13.94□□□□□ -0.18
LIN54-207ENST00000508171 TXNDC2Q86VQ3 553 aa13.94□□□□□ -0.18
LIN54-207ENST00000508171 ITPRIPQ8IWB1 547 aa13.94□□□□□ -0.18
LIN54-207ENST00000508171 PHACTR3Q96KR7 559 aa13.94□□□□□ -0.18
LIN54-207ENST00000508171 RIMBP3CA6NJZ7 1639 aa13.93□□□□□ -0.18
LIN54-207ENST00000508171 RIMBP3BA6NNM3 1639 aa13.93□□□□□ -0.18
LIN54-207ENST00000508171 RIMBP3Q9UFD9 1639 aa13.93□□□□□ -0.18
LIN54-207ENST00000508171 SETD1AO15047 1707 aaKnown RBP13.93□□□□□ -0.18
LIN54-207ENST00000508171 RSPH6AQ9H0K4 717 aa13.93□□□□□ -0.18
LIN54-207ENST00000508171 EMILIN1Q9Y6C2 1016 aa13.93□□□□□ -0.18
LIN54-207ENST00000508171 AGLP35573 1532 aa13.92□□□□□ -0.18
LIN54-207ENST00000508171 NME9Q86XW9 330 aa13.92□□□□□ -0.18
LIN54-207ENST00000508171 PNNQ9H307 717 aaKnown RBP13.92□□□□□ -0.18
LIN54-207ENST00000508171 METP08581 1390 aa13.92□□□□□ -0.18
LIN54-207ENST00000508171 SPATA31D1Q6ZQQ2 1576 aa13.92□□□□□ -0.18
LIN54-207ENST00000508171 LRRC7Q96NW7 1537 aa13.92□□□□□ -0.18
LIN54-207ENST00000508171 TMEM57Q8N5G2 664 aa13.92□□□□□ -0.18
LIN54-207ENST00000508171 THUMPD2Q9BTF0 503 aaKnown RBP13.92□□□□□ -0.18
LIN54-207ENST00000508171 WASLO00401 505 aaPredicted RBP13.91□□□□□ -0.18
LIN54-207ENST00000508171 DLC1Q96QB1 1528 aa13.91□□□□□ -0.18
LIN54-207ENST00000508171 REREQ9P2R6 1566 aa13.91□□□□□ -0.18
LIN54-207ENST00000508171 DDX19BQ9UMR2 479 aa13.9□□□□□ -0.18
LIN54-207ENST00000508171 ATP7BP35670 1465 aa13.9□□□□□ -0.18
LIN54-207ENST00000508171 PPIP5K1Q6PFW1 1433 aa13.89□□□□□ -0.19
LIN54-207ENST00000508171 FAM135BQ49AJ0 1406 aa13.89□□□□□ -0.19
LIN54-207ENST00000508171 NRXN3Q9Y4C0 1643 aa13.89□□□□□ -0.19
LIN54-207ENST00000508171 CPSF1Q10570 1443 aaKnown RBP13.89□□□□□ -0.19
LIN54-207ENST00000508171 FRAT2O75474 233 aaPredicted RBP13.88□□□□□ -0.19
LIN54-207ENST00000508171 NUDT16Q96DE0 195 aaKnown RBP13.88□□□□□ -0.19
LIN54-207ENST00000508171 IL13P35225 146 aa13.88□□□□□ -0.19
LIN54-207ENST00000508171 ZBTB40Q9NUA8 1239 aa13.88□□□□□ -0.19
LIN54-207ENST00000508171 CDC42BPGQ6DT37 1551 aa13.88□□□□□ -0.19
LIN54-207ENST00000508171 HDAC1Q13547 482 aaPredicted RBP13.87□□□□□ -0.19
LIN54-207ENST00000508171 RRS1Q15050 365 aaKnown RBP13.87□□□□□ -0.19
LIN54-207ENST00000508171 ZMYM3Q14202 1370 aa13.87□□□□□ -0.19
LIN54-207ENST00000508171 NFE2L2Q16236 605 aa13.87□□□□□ -0.19
LIN54-207ENST00000508171 TSPYL6Q8N831 410 aa13.87□□□□□ -0.19
LIN54-207ENST00000508171 ELL2O00472 640 aaPredicted RBP13.87□□□□□ -0.19
LIN54-207ENST00000508171 IPO8O15397 1037 aaKnown RBP13.87□□□□□ -0.19
LIN54-207ENST00000508171 EDC4Q6P2E9 1401 aaKnown RBP13.86□□□□□ -0.19
LIN54-207ENST00000508171 ALDH1L2Q3SY69 923 aa13.86□□□□□ -0.19
LIN54-207ENST00000508171 ESF1Q9H501 851 aaKnown RBP13.86□□□□□ -0.19
LIN54-207ENST00000508171 KIF16BQ96L93 1317 aa13.86□□□□□ -0.19
LIN54-207ENST00000508171 TBC1D32Q96NH3 1257 aa13.86□□□□□ -0.19
LIN54-207ENST00000508171 CCDC61Q9Y6R9 512 aa13.86□□□□□ -0.19
LIN54-207ENST00000508171 VAMP4O75379 141 aa13.85□□□□□ -0.19
LIN54-207ENST00000508171 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.85□□□□□ -0.19
LIN54-207ENST00000508171 CPS1P31327 1500 aa13.85□□□□□ -0.19
LIN54-207ENST00000508171 SMC5Q8IY18 1101 aa13.85□□□□□ -0.19
LIN54-207ENST00000508171 UPF2Q9HAU5 1272 aaKnown RBP13.85□□□□□ -0.19
LIN54-207ENST00000508171 GSE1Q14687 1217 aa13.84□□□□□ -0.19
LIN54-207ENST00000508171 COG3Q96JB2 828 aa13.84□□□□□ -0.19
LIN54-207ENST00000508171 DLG5Q8TDM6 1919 aa13.84□□□□□ -0.19
LIN54-207ENST00000508171 SLKQ9H2G2 1235 aaPredicted RBP13.84□□□□□ -0.19
LIN54-207ENST00000508171 PRR36Q9H6K5 1346 aa13.83□□□□□ -0.2
LIN54-207ENST00000508171 FAM83GA6ND36 823 aa13.83□□□□□ -0.2
LIN54-207ENST00000508171 MBIPQ9NS73 344 aa13.83□□□□□ -0.2
LIN54-207ENST00000508171 BECN1Q14457 450 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms