RNA–Protein interactions for RNA: ENST00000505823.5

PRDM2-214, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-214ENST00000505823 PLEKHG5O94827 1062 aa16.99■□□□□ 0.31
PRDM2-214ENST00000505823 CARD11Q9BXL7 1154 aa16.99■□□□□ 0.31
PRDM2-214ENST00000505823 ITSN1Q15811 1721 aa16.99■□□□□ 0.31
PRDM2-214ENST00000505823 UNC5CLQ8IV45 518 aa16.98■□□□□ 0.31
PRDM2-214ENST00000505823 U3KPZ7 1027 aaPredicted RBP16.98■□□□□ 0.31
PRDM2-214ENST00000505823 NBPF8Q3BBV2 869 aa16.97■□□□□ 0.31
PRDM2-214ENST00000505823 ACEP12821 1306 aa16.96■□□□□ 0.31
PRDM2-214ENST00000505823 CABLES1Q8TDN4 633 aa16.96■□□□□ 0.31
PRDM2-214ENST00000505823 BRD4O60885 1362 aaPredicted RBP16.96■□□□□ 0.31
PRDM2-214ENST00000505823 ATP7BP35670 1465 aa16.96■□□□□ 0.31
PRDM2-214ENST00000505823 USP32Q8NFA0 1604 aa16.96■□□□□ 0.3
PRDM2-214ENST00000505823 CABP2Q9NPB3 220 aa16.95■□□□□ 0.3
PRDM2-214ENST00000505823 TIMELESSQ9UNS1 1208 aa16.95■□□□□ 0.3
PRDM2-214ENST00000505823 CLSPNQ9HAW4 1339 aa16.95■□□□□ 0.3
PRDM2-214ENST00000505823 POLR3AO14802 1390 aaPredicted RBP16.94■□□□□ 0.3
PRDM2-214ENST00000505823 ABTB2Q8N961 1025 aa16.94■□□□□ 0.3
PRDM2-214ENST00000505823 GJD4Q96KN9 370 aaPredicted RBP16.94■□□□□ 0.3
PRDM2-214ENST00000505823 CCDC9Q9Y3X0 531 aaKnown RBP16.94■□□□□ 0.3
PRDM2-214ENST00000505823 TRPM1Q7Z4N2 1603 aa16.93■□□□□ 0.3
PRDM2-214ENST00000505823 ZNF692Q9BU19 519 aaPredicted RBP16.93■□□□□ 0.3
PRDM2-214ENST00000505823 PCGF6Q9BYE7 350 aa16.93■□□□□ 0.3
PRDM2-214ENST00000505823 PPIP5K1Q6PFW1 1433 aa16.93■□□□□ 0.3
PRDM2-214ENST00000505823 NLRP13Q86W25 1043 aa16.92■□□□□ 0.3
PRDM2-214ENST00000505823 PRDM11Q9NQV5 511 aa16.92■□□□□ 0.3
PRDM2-214ENST00000505823 CABP1Q9NZU7 370 aa16.92■□□□□ 0.3
PRDM2-214ENST00000505823 ATAD2Q6PL18 1390 aa16.91■□□□□ 0.3
PRDM2-214ENST00000505823 ATRNO75882 1429 aa16.91■□□□□ 0.3
PRDM2-214ENST00000505823 MARF1Q9Y4F3 1742 aaKnown RBP16.9■□□□□ 0.3
PRDM2-214ENST00000505823 BCL9LQ86UU0 1499 aa16.9■□□□□ 0.3
PRDM2-214ENST00000505823 QRICH2Q9H0J4 1663 aa16.9■□□□□ 0.3
PRDM2-214ENST00000505823 VPS72Q15906 364 aa16.89■□□□□ 0.29
PRDM2-214ENST00000505823 SLIT2O94813 1529 aa16.88■□□□□ 0.29
PRDM2-214ENST00000505823 FAM83GA6ND36 823 aa16.88■□□□□ 0.29
PRDM2-214ENST00000505823 BTG4Q9NY30 223 aa16.88■□□□□ 0.29
PRDM2-214ENST00000505823 SBNO2Q9Y2G9 1366 aa16.88■□□□□ 0.29
PRDM2-214ENST00000505823 RALGAPBQ86X10 1494 aa16.87■□□□□ 0.29
PRDM2-214ENST00000505823 A0A0G2JS52 829 aa16.86■□□□□ 0.29
PRDM2-214ENST00000505823 EVA1CP58658 441 aa16.86■□□□□ 0.29
PRDM2-214ENST00000505823 MYT1Q01538 1121 aa16.86■□□□□ 0.29
PRDM2-214ENST00000505823 NUTM2GQ5VZR2 741 aa16.86■□□□□ 0.29
PRDM2-214ENST00000505823 UPF1Q92900 1129 aaKnown RBP eCLIP16.86■□□□□ 0.29
PRDM2-214ENST00000505823 TRPM3Q9HCF6 1732 aaPredicted RBP16.86■□□□□ 0.29
PRDM2-214ENST00000505823 RGS12O14924 1447 aa16.86■□□□□ 0.29
PRDM2-214ENST00000505823 NLRP6P59044 892 aa16.85■□□□□ 0.29
PRDM2-214ENST00000505823 CCDC125Q86Z20 511 aa16.85■□□□□ 0.29
PRDM2-214ENST00000505823 PUS7Q96PZ0 661 aaKnown RBP16.85■□□□□ 0.29
PRDM2-214ENST00000505823 ALS2Q96Q42 1657 aa16.85■□□□□ 0.29
PRDM2-214ENST00000505823 HDGFL2Q7Z4V5 671 aaPredicted RBP16.84■□□□□ 0.29
PRDM2-214ENST00000505823 TMC1Q8TDI8 760 aa16.84■□□□□ 0.29
PRDM2-214ENST00000505823 TERF2IPQ9NYB0 399 aa16.84■□□□□ 0.29
PRDM2-214ENST00000505823 TOPAZ1Q8N9V7 1692 aa16.84■□□□□ 0.29
PRDM2-214ENST00000505823 CCER1Q8TC90 406 aaPredicted RBP16.83■□□□□ 0.28
PRDM2-214ENST00000505823 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.83■□□□□ 0.28
PRDM2-214ENST00000505823 NWD2Q9ULI1 1742 aa16.82■□□□□ 0.28
PRDM2-214ENST00000505823 TTC21AQ8NDW8 1320 aa16.82■□□□□ 0.28
PRDM2-214ENST00000505823 ZC3H6P61129 1189 aaKnown RBP16.82■□□□□ 0.28
PRDM2-214ENST00000505823 CDCA8Q53HL2 280 aa16.82■□□□□ 0.28
PRDM2-214ENST00000505823 USP6P35125 1406 aa16.81■□□□□ 0.28
PRDM2-214ENST00000505823 KIAA0232Q92628 1395 aa16.81■□□□□ 0.28
PRDM2-214ENST00000505823 GCP02774 474 aa16.81■□□□□ 0.28
PRDM2-214ENST00000505823 KCNH5Q8NCM2 988 aa16.81■□□□□ 0.28
PRDM2-214ENST00000505823 COL14A1Q05707 1796 aaKnown RBP16.81■□□□□ 0.28
PRDM2-214ENST00000505823 KTN1Q86UP2 1357 aaKnown RBP16.8■□□□□ 0.28
PRDM2-214ENST00000505823 SF3B2Q13435 895 aaKnown RBP16.8■□□□□ 0.28
PRDM2-214ENST00000505823 SEPT12Q8IYM1 358 aa16.8■□□□□ 0.28
PRDM2-214ENST00000505823 ST20-MTHFSA0A0A6YYL1 179 aa16.79■□□□□ 0.28
PRDM2-214ENST00000505823 ONECUT3O60422 494 aaPredicted RBP16.79■□□□□ 0.28
PRDM2-214ENST00000505823 TMF1P82094 1093 aa16.79■□□□□ 0.28
PRDM2-214ENST00000505823 CPDO75976 1380 aa16.78■□□□□ 0.28
PRDM2-214ENST00000505823 NINLQ9Y2I6 1382 aa16.78■□□□□ 0.28
PRDM2-214ENST00000505823 USP19O94966 1318 aa16.78■□□□□ 0.28
PRDM2-214ENST00000505823 STRN4Q9NRL3 753 aa16.78■□□□□ 0.28
PRDM2-214ENST00000505823 ABCA3Q99758 1704 aa16.78■□□□□ 0.28
PRDM2-214ENST00000505823 TTC21BQ7Z4L5 1316 aa16.77■□□□□ 0.28
PRDM2-214ENST00000505823 CHRNA2Q15822 529 aa16.77■□□□□ 0.28
PRDM2-214ENST00000505823 KRT27Q7Z3Y8 459 aa16.77■□□□□ 0.28
PRDM2-214ENST00000505823 PLCH1Q4KWH8 1693 aa16.77■□□□□ 0.28
PRDM2-214ENST00000505823 ZBTB7CA1YPR0 619 aa16.76■□□□□ 0.27
PRDM2-214ENST00000505823 FAM98CQ17RN3 349 aaKnown RBP16.76■□□□□ 0.27
PRDM2-214ENST00000505823 SPATA31A5Q5VU36 1347 aa16.75■□□□□ 0.27
PRDM2-214ENST00000505823 SPATA31A7Q8IWB4 1347 aa16.75■□□□□ 0.27
PRDM2-214ENST00000505823 CPSF1Q10570 1443 aaKnown RBP16.73■□□□□ 0.27
PRDM2-214ENST00000505823 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.73■□□□□ 0.27
PRDM2-214ENST00000505823 THRAP3Q9Y2W1 955 aaKnown RBP16.73■□□□□ 0.27
PRDM2-214ENST00000505823 USP47Q96K76 1375 aa16.73■□□□□ 0.27
PRDM2-214ENST00000505823 SLC12A5Q9H2X9 1139 aa16.72■□□□□ 0.27
PRDM2-214ENST00000505823 AATKQ6ZMQ8 1374 aa16.72■□□□□ 0.27
PRDM2-214ENST00000505823 GLI3P10071 1580 aa16.72■□□□□ 0.27
PRDM2-214ENST00000505823 SPATA31A1Q5TZJ5 1347 aa16.71■□□□□ 0.27
PRDM2-214ENST00000505823 TCP11L2Q8N4U5 519 aa16.71■□□□□ 0.27
PRDM2-214ENST00000505823 TESK2Q96S53 571 aa16.71■□□□□ 0.27
PRDM2-214ENST00000505823 USP35Q9P2H5 1018 aa16.71■□□□□ 0.27
PRDM2-214ENST00000505823 SSH2Q76I76 1423 aa16.7■□□□□ 0.26
PRDM2-214ENST00000505823 PHRF1Q9P1Y6 1649 aaKnown RBP16.7■□□□□ 0.26
PRDM2-214ENST00000505823 C11orf95C9JLR9 678 aaPredicted RBP16.7■□□□□ 0.26
PRDM2-214ENST00000505823 PDE3BQ13370 1112 aa16.7■□□□□ 0.26
PRDM2-214ENST00000505823 BARGINQ6ZT62 677 aa16.7■□□□□ 0.26
PRDM2-214ENST00000505823 SOX12O15370 315 aa16.69■□□□□ 0.26
PRDM2-214ENST00000505823 CSB-PGBD3P0DP91 1061 aa16.69■□□□□ 0.26
PRDM2-214ENST00000505823 CRYBG1Q9Y4K1 1723 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms