RNA–Protein interactions for RNA: ENST00000505030.5

LINC00461-204, long intergenic non-protein coding RNA 461, humanhuman

TSL 1 (best)

Gene LINC00461, Length 3,558 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00461-204ENST00000505030 PTPRUQ92729 1446 aa9.49□□□□□ -0.89
LINC00461-204ENST00000505030 IRX6P78412 446 aaPredicted RBP9.49□□□□□ -0.89
LINC00461-204ENST00000505030 DCCP43146 1447 aa9.48□□□□□ -0.89
LINC00461-204ENST00000505030 NUDT16Q96DE0 195 aaKnown RBP9.48□□□□□ -0.89
LINC00461-204ENST00000505030 CABP2Q9NPB3 220 aa9.48□□□□□ -0.89
LINC00461-204ENST00000505030 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.48□□□□□ -0.89
LINC00461-204ENST00000505030 HNRNPUQ00839 825 aaKnown RBP eCLIP9.48□□□□□ -0.89
LINC00461-204ENST00000505030 WDR43Q15061 677 aaKnown RBP eCLIP9.48□□□□□ -0.89
LINC00461-204ENST00000505030 BLMP54132 1417 aaPredicted RBP9.48□□□□□ -0.89
LINC00461-204ENST00000505030 A0A1W2PP64 1363 aa9.47□□□□□ -0.89
LINC00461-204ENST00000505030 MSH6P52701 1360 aa9.47□□□□□ -0.89
LINC00461-204ENST00000505030 ADGRL3Q9HAR2 1447 aa9.47□□□□□ -0.89
LINC00461-204ENST00000505030 SLC12A5Q9H2X9 1139 aa9.47□□□□□ -0.89
LINC00461-204ENST00000505030 RNF123Q5XPI4 1314 aa9.47□□□□□ -0.89
LINC00461-204ENST00000505030 CC2D1BQ5T0F9 858 aaKnown RBP9.47□□□□□ -0.89
LINC00461-204ENST00000505030 DAXXQ9UER7 740 aaPredicted RBP9.47□□□□□ -0.89
LINC00461-204ENST00000505030 AATKQ6ZMQ8 1374 aa9.47□□□□□ -0.89
LINC00461-204ENST00000505030 USP54Q70EL1 1684 aa9.47□□□□□ -0.89
LINC00461-204ENST00000505030 CARD14Q9BXL6 1004 aa9.47□□□□□ -0.89
LINC00461-204ENST00000505030 CD163L1Q9NR16 1453 aa9.46□□□□□ -0.89
LINC00461-204ENST00000505030 KIF1AQ12756 1690 aa9.46□□□□□ -0.89
LINC00461-204ENST00000505030 NUDCQ9Y266 331 aa9.46□□□□□ -0.89
LINC00461-204ENST00000505030 PLEKHH1Q9ULM0 1364 aa9.46□□□□□ -0.9
LINC00461-204ENST00000505030 WAPLQ7Z5K2 1190 aa9.45□□□□□ -0.9
LINC00461-204ENST00000505030 ZNF772Q68DY9 489 aaPredicted RBP9.45□□□□□ -0.9
LINC00461-204ENST00000505030 SLC26A8Q96RN1 970 aa9.45□□□□□ -0.9
LINC00461-204ENST00000505030 KIF24Q5T7B8 1368 aa9.45□□□□□ -0.9
LINC00461-204ENST00000505030 FANCIQ9NVI1 1328 aa9.44□□□□□ -0.9
LINC00461-204ENST00000505030 ERICH6BQ5W0A0 696 aa9.44□□□□□ -0.9
LINC00461-204ENST00000505030 NRKQ7Z2Y5 1582 aa9.44□□□□□ -0.9
LINC00461-204ENST00000505030 CABP1Q9NZU7 370 aa9.44□□□□□ -0.9
LINC00461-204ENST00000505030 SMG6Q86US8 1419 aaKnown RBP9.44□□□□□ -0.9
LINC00461-204ENST00000505030 CADPS2Q86UW7 1296 aa9.44□□□□□ -0.9
LINC00461-204ENST00000505030 SAFB2Q14151 953 aaKnown RBP eCLIP9.43□□□□□ -0.9
LINC00461-204ENST00000505030 FAM9BQ8IZU0 186 aa9.43□□□□□ -0.9
LINC00461-204ENST00000505030 USP31Q70CQ4 1352 aa9.43□□□□□ -0.9
LINC00461-204ENST00000505030 USP6P35125 1406 aa9.42□□□□□ -0.9
LINC00461-204ENST00000505030 COG3Q96JB2 828 aa9.42□□□□□ -0.9
LINC00461-204ENST00000505030 NALCNQ8IZF0 1738 aa9.42□□□□□ -0.9
LINC00461-204ENST00000505030 CDK12Q9NYV4 1490 aaPredicted RBP9.41□□□□□ -0.9
LINC00461-204ENST00000505030 SALL2Q9Y467 1007 aaPredicted RBP9.41□□□□□ -0.9
LINC00461-204ENST00000505030 FYB1O15117 783 aa9.4□□□□□ -0.9
LINC00461-204ENST00000505030 NEFLP07196 543 aa9.4□□□□□ -0.9
LINC00461-204ENST00000505030 PNPLA6Q8IY17 1366 aa9.4□□□□□ -0.9
LINC00461-204ENST00000505030 MST1RQ04912 1400 aa9.4□□□□□ -0.91
LINC00461-204ENST00000505030 SSH2Q76I76 1423 aa9.4□□□□□ -0.91
LINC00461-204ENST00000505030 NGLY1Q96IV0 654 aa9.4□□□□□ -0.91
LINC00461-204ENST00000505030 NEFMP07197 916 aa9.39□□□□□ -0.91
LINC00461-204ENST00000505030 C19orf44Q9H6X5 657 aa9.39□□□□□ -0.91
LINC00461-204ENST00000505030 TTC21BQ7Z4L5 1316 aa9.39□□□□□ -0.91
LINC00461-204ENST00000505030 ACEP12821 1306 aa9.38□□□□□ -0.91
LINC00461-204ENST00000505030 HAP1P54257 671 aaPredicted RBP9.38□□□□□ -0.91
LINC00461-204ENST00000505030 SF3B2Q13435 895 aaKnown RBP9.38□□□□□ -0.91
LINC00461-204ENST00000505030 CCDC27Q2M243 656 aa9.38□□□□□ -0.91
LINC00461-204ENST00000505030 NGDNQ8NEJ9 315 aaKnown RBP9.38□□□□□ -0.91
LINC00461-204ENST00000505030 RUNDC1Q96C34 613 aa9.38□□□□□ -0.91
LINC00461-204ENST00000505030 PRR36Q9H6K5 1346 aa9.38□□□□□ -0.91
LINC00461-204ENST00000505030 JCADQ9P266 1359 aa9.38□□□□□ -0.91
LINC00461-204ENST00000505030 LTBP4Q8N2S1 1624 aa9.37□□□□□ -0.91
LINC00461-204ENST00000505030 SHPRHQ149N8 1683 aa9.37□□□□□ -0.91
LINC00461-204ENST00000505030 PPP4R2Q9NY27 417 aa9.37□□□□□ -0.91
LINC00461-204ENST00000505030 OVOS2A0A0J9YW53 1432 aa9.37□□□□□ -0.91
LINC00461-204ENST00000505030 OVOS2Q6IE36 1432 aa9.37□□□□□ -0.91
LINC00461-204ENST00000505030 RXRBP28702 533 aa9.37□□□□□ -0.91
LINC00461-204ENST00000505030 PSME1Q06323 249 aa9.37□□□□□ -0.91
LINC00461-204ENST00000505030 RTL1A6NKG5 1358 aa9.37□□□□□ -0.91
LINC00461-204ENST00000505030 NUTM2BA6NNL0 878 aaPredicted RBP9.37□□□□□ -0.91
LINC00461-204ENST00000505030 NUTM2EB1AL46 878 aaPredicted RBP9.37□□□□□ -0.91
LINC00461-204ENST00000505030 NUTM2AQ8IVF1 878 aaPredicted RBP9.37□□□□□ -0.91
LINC00461-204ENST00000505030 PHF8Q9UPP1 1060 aa9.37□□□□□ -0.91
LINC00461-204ENST00000505030 B4GALNT3Q6L9W6 998 aa9.36□□□□□ -0.91
LINC00461-204ENST00000505030 SLAIN2Q9P270 581 aa9.36□□□□□ -0.91
LINC00461-204ENST00000505030 ABCC6O95255 1503 aa9.36□□□□□ -0.91
LINC00461-204ENST00000505030 DIAPH1O60610 1272 aaKnown RBP9.36□□□□□ -0.91
LINC00461-204ENST00000505030 MTHFSP49914 203 aa9.36□□□□□ -0.91
LINC00461-204ENST00000505030 CCDC136Q96JN2 1154 aa9.36□□□□□ -0.91
LINC00461-204ENST00000505030 COL3A1P02461 1466 aaPredicted RBP9.36□□□□□ -0.91
LINC00461-204ENST00000505030 DCAF8L1A6NGE4 600 aa9.35□□□□□ -0.91
LINC00461-204ENST00000505030 CALD1Q05682 793 aaKnown RBP9.35□□□□□ -0.91
LINC00461-204ENST00000505030 PLEKHG2Q9H7P9 1386 aa9.35□□□□□ -0.91
LINC00461-204ENST00000505030 KCNH5Q8NCM2 988 aa9.35□□□□□ -0.91
LINC00461-204ENST00000505030 TMEM94Q12767 1356 aa9.35□□□□□ -0.91
LINC00461-204ENST00000505030 SPATA31A6Q5VVP1 1343 aa9.35□□□□□ -0.91
LINC00461-204ENST00000505030 FCHSD2O94868 740 aa9.35□□□□□ -0.91
LINC00461-204ENST00000505030 STRCQ7RTU9 1775 aa9.35□□□□□ -0.91
LINC00461-204ENST00000505030 PHRF1Q9P1Y6 1649 aaKnown RBP9.34□□□□□ -0.91
LINC00461-204ENST00000505030 WDR63Q8IWG1 891 aa9.34□□□□□ -0.91
LINC00461-204ENST00000505030 ADAMTS8Q9UP79 889 aa9.34□□□□□ -0.91
LINC00461-204ENST00000505030 SBNO1A3KN83 1393 aa9.34□□□□□ -0.91
LINC00461-204ENST00000505030 LMOD3Q0VAK6 560 aa9.34□□□□□ -0.91
LINC00461-204ENST00000505030 GGNBP2Q9H3C7 697 aa9.34□□□□□ -0.91
LINC00461-204ENST00000505030 IL16Q14005 1332 aa9.33□□□□□ -0.92
LINC00461-204ENST00000505030 CT47B1P0C2W7 299 aaPredicted RBP9.33□□□□□ -0.92
LINC00461-204ENST00000505030 LRRC59Q96AG4 307 aaKnown RBP9.33□□□□□ -0.92
LINC00461-204ENST00000505030 MAP2P11137 1827 aaKnown RBP9.33□□□□□ -0.92
LINC00461-204ENST00000505030 C1orf167Q5SNV9 1468 aa9.33□□□□□ -0.92
LINC00461-204ENST00000505030 MAPK8IP3Q9UPT6 1336 aa9.32□□□□□ -0.92
LINC00461-204ENST00000505030 RGPD8O14715 1765 aaPredicted RBP9.32□□□□□ -0.92
LINC00461-204ENST00000505030 E9PSI1 815 aa9.32□□□□□ -0.92
LINC00461-204ENST00000505030 UBE2Q2Q8WVN8 375 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms