RNA–Protein interactions for RNA: ENST00000500197.6

LINC00461-201, long intergenic non-protein coding RNA 461, humanhuman

TSL 1 (best) BASIC

Gene LINC00461, Length 3,381 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00461-201ENST00000500197 CABP2Q9NPB3 220 aa12.87□□□□□ -0.35
LINC00461-201ENST00000500197 DLG5Q8TDM6 1919 aa12.87□□□□□ -0.35
LINC00461-201ENST00000500197 BRPF1P55201 1214 aaPredicted RBP12.86□□□□□ -0.35
LINC00461-201ENST00000500197 CDK19Q9BWU1 502 aa12.86□□□□□ -0.35
LINC00461-201ENST00000500197 PNNQ9H307 717 aaKnown RBP12.86□□□□□ -0.35
LINC00461-201ENST00000500197 PHRF1Q9P1Y6 1649 aaKnown RBP12.86□□□□□ -0.35
LINC00461-201ENST00000500197 CNGB1Q14028 1251 aaPredicted RBP12.85□□□□□ -0.35
LINC00461-201ENST00000500197 HDGFL2Q7Z4V5 671 aaPredicted RBP12.85□□□□□ -0.35
LINC00461-201ENST00000500197 OVOS2A0A0J9YW53 1432 aa12.85□□□□□ -0.35
LINC00461-201ENST00000500197 OVOS2Q6IE36 1432 aa12.85□□□□□ -0.35
LINC00461-201ENST00000500197 BACH2Q9BYV9 841 aa12.85□□□□□ -0.35
LINC00461-201ENST00000500197 PIK3R4Q99570 1358 aa12.85□□□□□ -0.35
LINC00461-201ENST00000500197 TCP11L2Q8N4U5 519 aa12.84□□□□□ -0.35
LINC00461-201ENST00000500197 DMRT2Q9Y5R5 561 aa12.84□□□□□ -0.35
LINC00461-201ENST00000500197 USP31Q70CQ4 1352 aa12.84□□□□□ -0.35
LINC00461-201ENST00000500197 LRRC37A3O60309 1634 aa12.83□□□□□ -0.35
LINC00461-201ENST00000500197 PEAK1Q9H792 1746 aa12.83□□□□□ -0.36
LINC00461-201ENST00000500197 WASLO00401 505 aaPredicted RBP12.83□□□□□ -0.36
LINC00461-201ENST00000500197 C20orf194Q5TEA3 1177 aa12.83□□□□□ -0.36
LINC00461-201ENST00000500197 CCDC146Q8IYE0 955 aa12.83□□□□□ -0.36
LINC00461-201ENST00000500197 N4BP2Q86UW6 1770 aaPredicted RBP12.82□□□□□ -0.36
LINC00461-201ENST00000500197 ANKARQ7Z5J8 1434 aa12.82□□□□□ -0.36
LINC00461-201ENST00000500197 MYH16Q9H6N6 1097 aa12.82□□□□□ -0.36
LINC00461-201ENST00000500197 CHD2O14647 1828 aaKnown RBP12.82□□□□□ -0.36
LINC00461-201ENST00000500197 RARSP54136 660 aaKnown RBP12.82□□□□□ -0.36
LINC00461-201ENST00000500197 ZNF428Q96B54 188 aa12.82□□□□□ -0.36
LINC00461-201ENST00000500197 ADAMTSL3P82987 1691 aa12.82□□□□□ -0.36
LINC00461-201ENST00000500197 PTPRUQ92729 1446 aa12.81□□□□□ -0.36
LINC00461-201ENST00000500197 FCHSD2O94868 740 aa12.81□□□□□ -0.36
LINC00461-201ENST00000500197 CEP170BQ9Y4F5 1589 aaPredicted RBP12.8□□□□□ -0.36
LINC00461-201ENST00000500197 POGKQ9P215 609 aa12.8□□□□□ -0.36
LINC00461-201ENST00000500197 SRPK2P78362 688 aaKnown RBP12.8□□□□□ -0.36
LINC00461-201ENST00000500197 TRIM35Q9UPQ4 493 aa12.8□□□□□ -0.36
LINC00461-201ENST00000500197 PLEKHG3A1L390 1219 aa12.8□□□□□ -0.36
LINC00461-201ENST00000500197 ROBO2Q9HCK4 1378 aa12.79□□□□□ -0.36
LINC00461-201ENST00000500197 PLIN1O60240 522 aa12.79□□□□□ -0.36
LINC00461-201ENST00000500197 ZNF692Q9BU19 519 aaPredicted RBP12.79□□□□□ -0.36
LINC00461-201ENST00000500197 PIK3C2AO00443 1686 aa12.79□□□□□ -0.36
LINC00461-201ENST00000500197 IPO9Q96P70 1041 aaKnown RBP12.79□□□□□ -0.36
LINC00461-201ENST00000500197 MINK1Q8N4C8 1332 aaPredicted RBP12.79□□□□□ -0.36
LINC00461-201ENST00000500197 USP6P35125 1406 aa12.78□□□□□ -0.36
LINC00461-201ENST00000500197 PDE4AP27815 886 aa12.78□□□□□ -0.36
LINC00461-201ENST00000500197 TMPOP42166 694 aaKnown RBP12.78□□□□□ -0.36
LINC00461-201ENST00000500197 RSPH6AQ9H0K4 717 aa12.78□□□□□ -0.36
LINC00461-201ENST00000500197 SALL2Q9Y467 1007 aaPredicted RBP12.78□□□□□ -0.36
LINC00461-201ENST00000500197 KIF24Q5T7B8 1368 aa12.78□□□□□ -0.36
LINC00461-201ENST00000500197 NWD1Q149M9 1564 aa12.77□□□□□ -0.36
LINC00461-201ENST00000500197 NUTM2DQ5VT03 806 aaPredicted RBP12.77□□□□□ -0.36
LINC00461-201ENST00000500197 CABP1Q9NZU7 370 aa12.77□□□□□ -0.37
LINC00461-201ENST00000500197 POLKQ9UBT6 870 aa12.77□□□□□ -0.37
LINC00461-201ENST00000500197 DIAPH1O60610 1272 aaKnown RBP12.76□□□□□ -0.37
LINC00461-201ENST00000500197 ALDH1L2Q3SY69 923 aa12.76□□□□□ -0.37
LINC00461-201ENST00000500197 TBX22Q9Y458 520 aa12.75□□□□□ -0.37
LINC00461-201ENST00000500197 CCDC61Q9Y6R9 512 aa12.75□□□□□ -0.37
LINC00461-201ENST00000500197 BCAR3O75815 825 aa12.75□□□□□ -0.37
LINC00461-201ENST00000500197 IL13P35225 146 aa12.75□□□□□ -0.37
LINC00461-201ENST00000500197 STK26Q9P289 416 aa12.75□□□□□ -0.37
LINC00461-201ENST00000500197 LMTK3Q96Q04 1460 aa12.75□□□□□ -0.37
LINC00461-201ENST00000500197 CLUAP1Q96AJ1 413 aa12.74□□□□□ -0.37
LINC00461-201ENST00000500197 CAMTA1Q9Y6Y1 1673 aa12.74□□□□□ -0.37
LINC00461-201ENST00000500197 ZNF853P0CG23 659 aa12.74□□□□□ -0.37
LINC00461-201ENST00000500197 STAG3Q9UJ98 1225 aa12.74□□□□□ -0.37
LINC00461-201ENST00000500197 PRR36Q9H6K5 1346 aa12.74□□□□□ -0.37
LINC00461-201ENST00000500197 MAPK8IP3Q9UPT6 1336 aa12.74□□□□□ -0.37
LINC00461-201ENST00000500197 RGPD8O14715 1765 aaPredicted RBP12.74□□□□□ -0.37
LINC00461-201ENST00000500197 GGNBP2Q9H3C7 697 aa12.73□□□□□ -0.37
LINC00461-201ENST00000500197 NUDT16Q96DE0 195 aaKnown RBP12.73□□□□□ -0.37
LINC00461-201ENST00000500197 NOP58Q9Y2X3 529 aaKnown RBP12.73□□□□□ -0.37
LINC00461-201ENST00000500197 TTC21AQ8NDW8 1320 aa12.73□□□□□ -0.37
LINC00461-201ENST00000500197 ANP32AP39687 249 aaKnown RBP12.72□□□□□ -0.37
LINC00461-201ENST00000500197 U2AF1L5P0DN76 240 aaPredicted RBP12.72□□□□□ -0.37
LINC00461-201ENST00000500197 U2AF1Q01081 240 aaKnown RBP eCLIP12.72□□□□□ -0.37
LINC00461-201ENST00000500197 C8orf34Q49A92 452 aa12.72□□□□□ -0.37
LINC00461-201ENST00000500197 WAPLQ7Z5K2 1190 aa12.72□□□□□ -0.37
LINC00461-201ENST00000500197 PMFBP1Q8TBY8 1022 aa12.72□□□□□ -0.37
LINC00461-201ENST00000500197 MST1RQ04912 1400 aa12.72□□□□□ -0.37
LINC00461-201ENST00000500197 CALD1Q05682 793 aaKnown RBP12.71□□□□□ -0.37
LINC00461-201ENST00000500197 ARHGEF10O15013 1369 aa12.71□□□□□ -0.37
LINC00461-201ENST00000500197 FAM161AQ3B820 660 aa12.71□□□□□ -0.38
LINC00461-201ENST00000500197 ARHGAP45Q92619 1136 aa12.71□□□□□ -0.38
LINC00461-201ENST00000500197 SENP3-EIF4A1A0A087X0R7 540 aa12.7□□□□□ -0.38
LINC00461-201ENST00000500197 KDRP35968 1356 aa12.7□□□□□ -0.38
LINC00461-201ENST00000500197 HDAC1Q13547 482 aaPredicted RBP12.7□□□□□ -0.38
LINC00461-201ENST00000500197 MVPQ14764 893 aaKnown RBP12.69□□□□□ -0.38
LINC00461-201ENST00000500197 NFE2L2Q16236 605 aa12.69□□□□□ -0.38
LINC00461-201ENST00000500197 IFT57Q9NWB7 429 aa12.69□□□□□ -0.38
LINC00461-201ENST00000500197 KIF16BQ96L93 1317 aa12.69□□□□□ -0.38
LINC00461-201ENST00000500197 LTKP29376 864 aa12.68□□□□□ -0.38
LINC00461-201ENST00000500197 TTC21BQ7Z4L5 1316 aa12.68□□□□□ -0.38
LINC00461-201ENST00000500197 DDRGK1Q96HY6 314 aa12.68□□□□□ -0.38
LINC00461-201ENST00000500197 ESF1Q9H501 851 aaKnown RBP12.68□□□□□ -0.38
LINC00461-201ENST00000500197 MED1Q15648 1581 aaPredicted RBP12.68□□□□□ -0.38
LINC00461-201ENST00000500197 ZKSCAN2Q63HK3 967 aa12.67□□□□□ -0.38
LINC00461-201ENST00000500197 CACNA1FO60840 1977 aa12.67□□□□□ -0.38
LINC00461-201ENST00000500197 FAM208AQ9UK61 1670 aaKnown RBP12.67□□□□□ -0.38
LINC00461-201ENST00000500197 LMOD3Q0VAK6 560 aa12.67□□□□□ -0.38
LINC00461-201ENST00000500197 KIAA0232Q92628 1395 aa12.66□□□□□ -0.38
LINC00461-201ENST00000500197 IGHDP01880 384 aa12.66□□□□□ -0.38
LINC00461-201ENST00000500197 ABCC6O95255 1503 aa12.66□□□□□ -0.38
LINC00461-201ENST00000500197 SAFB2Q14151 953 aaKnown RBP eCLIP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms