RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 INTS10Q9NVR2 710 aaKnown RBP2.03□□□□□ -2.08
XRN1-214ENST00000498077 SCAF11Q99590 1463 aaKnown RBP2.03□□□□□ -2.08
XRN1-214ENST00000498077 LZTS3O60299 673 aaPredicted RBP2.03□□□□□ -2.09
XRN1-214ENST00000498077 BAG6P46379 1132 aa2.03□□□□□ -2.09
XRN1-214ENST00000498077 B4GALNT4Q76KP1 1039 aa2.03□□□□□ -2.09
XRN1-214ENST00000498077 ABCC2Q92887 1545 aa2.03□□□□□ -2.09
XRN1-214ENST00000498077 KCNN4O15554 427 aa2.02□□□□□ -2.09
XRN1-214ENST00000498077 PDIA4P13667 645 aaKnown RBP2.02□□□□□ -2.09
XRN1-214ENST00000498077 CTCFP49711 727 aaPredicted RBP2.02□□□□□ -2.09
XRN1-214ENST00000498077 LSM11P83369 360 aaKnown RBP eCLIP2.02□□□□□ -2.09
XRN1-214ENST00000498077 FOXK1P85037 733 aa2.02□□□□□ -2.09
XRN1-214ENST00000498077 PTCD2Q8WV60 388 aaKnown RBP2.02□□□□□ -2.09
XRN1-214ENST00000498077 LRCH3Q96II8 777 aa2.02□□□□□ -2.09
XRN1-214ENST00000498077 LARP6Q9BRS8 491 aaKnown RBP2.02□□□□□ -2.09
XRN1-214ENST00000498077 FSTL1Q12841 308 aa2.02□□□□□ -2.09
XRN1-214ENST00000498077 PDCD7Q8N8D1 485 aaKnown RBP2.02□□□□□ -2.09
XRN1-214ENST00000498077 JPH4Q96JJ6 628 aa2.02□□□□□ -2.09
XRN1-214ENST00000498077 EPYCQ99645 322 aa2.02□□□□□ -2.09
XRN1-214ENST00000498077 PRRC2BQ5JSZ5 2229 aaKnown RBP2.02□□□□□ -2.09
XRN1-214ENST00000498077 EVI5O60447 810 aa2.02□□□□□ -2.09
XRN1-214ENST00000498077 LGR5O75473 907 aa2.02□□□□□ -2.09
XRN1-214ENST00000498077 RNF8O76064 485 aa2.02□□□□□ -2.09
XRN1-214ENST00000498077 VAC14Q08AM6 782 aa2.02□□□□□ -2.09
XRN1-214ENST00000498077 SPNS2Q8IVW8 549 aa2.02□□□□□ -2.09
XRN1-214ENST00000498077 RBM46Q8TBY0 533 aaKnown RBP2.02□□□□□ -2.09
XRN1-214ENST00000498077 TRPC6Q9Y210 931 aa2.02□□□□□ -2.09
XRN1-214ENST00000498077 ABCC3O15438 1527 aa2.02□□□□□ -2.09
XRN1-214ENST00000498077 NEO1Q92859 1461 aa2.02□□□□□ -2.09
XRN1-214ENST00000498077 DISP2A7MBM2 1401 aa2.02□□□□□ -2.09
XRN1-214ENST00000498077 PTPRUQ92729 1446 aa2.02□□□□□ -2.09
XRN1-214ENST00000498077 DHX16O60231 1041 aaKnown RBP2.02□□□□□ -2.09
XRN1-214ENST00000498077 VDRP11473 427 aa2.02□□□□□ -2.09
XRN1-214ENST00000498077 PTPN5P54829 565 aa2.02□□□□□ -2.09
XRN1-214ENST00000498077 KCNK17Q96T54 332 aa2.02□□□□□ -2.09
XRN1-214ENST00000498077 RSAD1Q9HA92 442 aa2.02□□□□□ -2.09
XRN1-214ENST00000498077 RRAGCQ9HB90 399 aa2.02□□□□□ -2.09
XRN1-214ENST00000498077 SPON1Q9HCB6 807 aa2.02□□□□□ -2.09
XRN1-214ENST00000498077 C10orf71Q711Q0 1435 aa2.02□□□□□ -2.09
XRN1-214ENST00000498077 TRAPPC8Q9Y2L5 1435 aa2.02□□□□□ -2.09
XRN1-214ENST00000498077 HAP1P54257 671 aaPredicted RBP2.02□□□□□ -2.09
XRN1-214ENST00000498077 MMRN1Q13201 1228 aa2.02□□□□□ -2.09
XRN1-214ENST00000498077 KCTD2Q14681 263 aa2.02□□□□□ -2.09
XRN1-214ENST00000498077 NUTM1Q86Y26 1132 aa2.02□□□□□ -2.09
XRN1-214ENST00000498077 AIDAQ96BJ3 306 aa2.02□□□□□ -2.09
XRN1-214ENST00000498077 NUDT12Q9BQG2 462 aa2.02□□□□□ -2.09
XRN1-214ENST00000498077 CFTRP13569 1480 aa2.01□□□□□ -2.09
XRN1-214ENST00000498077 KCNC4Q03721 635 aa2.01□□□□□ -2.09
XRN1-214ENST00000498077 CAMSAP1Q5T5Y3 1602 aa2.01□□□□□ -2.09
XRN1-214ENST00000498077 APPP05067 770 aa2.01□□□□□ -2.09
XRN1-214ENST00000498077 SYMPKQ92797 1274 aaKnown RBP2.01□□□□□ -2.09
XRN1-214ENST00000498077 LGR6Q9HBX8 967 aa2.01□□□□□ -2.09
XRN1-214ENST00000498077 RGPD1P0DJD0 1748 aa2.01□□□□□ -2.09
XRN1-214ENST00000498077 RAPGEF2Q9Y4G8 1499 aa2.01□□□□□ -2.09
XRN1-214ENST00000498077 FAM181BA6NEQ2 426 aa2.01□□□□□ -2.09
XRN1-214ENST00000498077 NR1I2O75469 434 aa2.01□□□□□ -2.09
XRN1-214ENST00000498077 HSPA1AP0DMV8 641 aaKnown RBP2.01□□□□□ -2.09
XRN1-214ENST00000498077 HSPA1BP0DMV9 641 aaKnown RBP2.01□□□□□ -2.09
XRN1-214ENST00000498077 AMPD1P23109 780 aa2.01□□□□□ -2.09
XRN1-214ENST00000498077 HABP4Q5JVS0 413 aaKnown RBP2.01□□□□□ -2.09
XRN1-214ENST00000498077 CPLX2Q6PUV4 134 aaKnown RBP2.01□□□□□ -2.09
XRN1-214ENST00000498077 CNGA4Q8IV77 575 aa2.01□□□□□ -2.09
XRN1-214ENST00000498077 IRX2Q9BZI1 471 aaPredicted RBP2.01□□□□□ -2.09
XRN1-214ENST00000498077 PIK3C2AO00443 1686 aa2.01□□□□□ -2.09
XRN1-214ENST00000498077 PPP1R3GB7ZBB8 358 aa2.01□□□□□ -2.09
XRN1-214ENST00000498077 TMC1Q8TDI8 760 aa2.01□□□□□ -2.09
XRN1-214ENST00000498077 CDKN2AIPQ9NXV6 580 aaPredicted RBP2.01□□□□□ -2.09
XRN1-214ENST00000498077 TSR3Q9UJK0 312 aaKnown RBP2.01□□□□□ -2.09
XRN1-214ENST00000498077 CARMIL2Q6F5E8 1435 aa2.01□□□□□ -2.09
XRN1-214ENST00000498077 GRIN2AQ12879 1464 aa2□□□□□ -2.09
XRN1-214ENST00000498077 C2orf72A6NCS6 295 aa2□□□□□ -2.09
XRN1-214ENST00000498077 UBAC1Q9BSL1 405 aa2□□□□□ -2.09
XRN1-214ENST00000498077 CFAP74Q9C0B2 1584 aa2□□□□□ -2.09
XRN1-214ENST00000498077 LHX6Q9UPM6 363 aa2□□□□□ -2.09
XRN1-214ENST00000498077 CROCC2H7BZ55 1655 aa2□□□□□ -2.09
XRN1-214ENST00000498077 CCDC85CA6NKD9 419 aa2□□□□□ -2.09
XRN1-214ENST00000498077 NCLP19338 710 aaKnown RBP2□□□□□ -2.09
XRN1-214ENST00000498077 ACAP1Q15027 740 aa2□□□□□ -2.09
XRN1-214ENST00000498077 ADGRD1Q6QNK2 874 aa2□□□□□ -2.09
XRN1-214ENST00000498077 SIAH1Q8IUQ4 282 aa2□□□□□ -2.09
XRN1-214ENST00000498077 ZNF428Q96B54 188 aa2□□□□□ -2.09
XRN1-214ENST00000498077 ZMYM4Q5VZL5 1548 aa2□□□□□ -2.09
XRN1-214ENST00000498077 NEXMIFQ5QGS0 1516 aa2□□□□□ -2.09
XRN1-214ENST00000498077 OATP04181 439 aa2□□□□□ -2.09
XRN1-214ENST00000498077 NUDT7P0C024 238 aa2□□□□□ -2.09
XRN1-214ENST00000498077 COL9A1P20849 921 aa2□□□□□ -2.09
XRN1-214ENST00000498077 ARHGAP27Q6ZUM4 889 aa2□□□□□ -2.09
XRN1-214ENST00000498077 LRRC4BQ9NT99 713 aa2□□□□□ -2.09
XRN1-214ENST00000498077 CCNL1Q9UK58 526 aaPredicted RBP2□□□□□ -2.09
XRN1-214ENST00000498077 FAM86C2PA6NEL3 165 aa2□□□□□ -2.09
XRN1-214ENST00000498077 GRIN3BO60391 1043 aa2□□□□□ -2.09
XRN1-214ENST00000498077 PSME1Q06323 249 aa2□□□□□ -2.09
XRN1-214ENST00000498077 PHACTR3Q96KR7 559 aa2□□□□□ -2.09
XRN1-214ENST00000498077 IL21Q9HBE4 155 aa2□□□□□ -2.09
XRN1-214ENST00000498077 FHOD3Q2V2M9 1422 aa2□□□□□ -2.09
XRN1-214ENST00000498077 ZBTB24O43167 697 aaPredicted RBP1.99□□□□□ -2.09
XRN1-214ENST00000498077 FBXW10Q5XX13 1052 aa1.99□□□□□ -2.09
XRN1-214ENST00000498077 FBXO22Q8NEZ5 403 aa1.99□□□□□ -2.09
XRN1-214ENST00000498077 FAM86C1Q9NVL1 165 aa1.99□□□□□ -2.09
XRN1-214ENST00000498077 CEP131Q9UPN4 1083 aa1.99□□□□□ -2.09
XRN1-214ENST00000498077 MROH2AA6NES4 1674 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms