RNA–Protein interactions for RNA: ENST00000495727.2

RC3H2-209, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 2

Gene RC3H2, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-209ENST00000495727 RNF166Q96A37 237 aaPredicted RBP8.74□□□□□ -1.01
RC3H2-209ENST00000495727 ZNF142P52746 1687 aaPredicted RBP8.74□□□□□ -1.01
RC3H2-209ENST00000495727 KCTD12Q96CX2 325 aaKnown RBP8.73□□□□□ -1.01
RC3H2-209ENST00000495727 FAM217BQ9NTX9 383 aaPredicted RBP8.73□□□□□ -1.01
RC3H2-209ENST00000495727 NLRP7Q8WX94 980 aa8.72□□□□□ -1.01
RC3H2-209ENST00000495727 PRR14Q9BWN1 585 aa8.72□□□□□ -1.01
RC3H2-209ENST00000495727 TSR3Q9UJK0 312 aaKnown RBP8.72□□□□□ -1.01
RC3H2-209ENST00000495727 SETBP1Q9Y6X0 1596 aa8.72□□□□□ -1.01
RC3H2-209ENST00000495727 PTPRKQ15262 1439 aa8.71□□□□□ -1.01
RC3H2-209ENST00000495727 FHOD3Q2V2M9 1422 aa8.71□□□□□ -1.01
RC3H2-209ENST00000495727 BCAMP50895 628 aa8.71□□□□□ -1.02
RC3H2-209ENST00000495727 POLR1AO95602 1720 aaPredicted RBP8.71□□□□□ -1.02
RC3H2-209ENST00000495727 ABCA8O94911 1581 aa8.7□□□□□ -1.02
RC3H2-209ENST00000495727 CFAP74Q9C0B2 1584 aa8.7□□□□□ -1.02
RC3H2-209ENST00000495727 RNF17Q9BXT8 1623 aaKnown RBP8.7□□□□□ -1.02
RC3H2-209ENST00000495727 RNF40O75150 1001 aa8.7□□□□□ -1.02
RC3H2-209ENST00000495727 HPS5Q9UPZ3 1129 aa8.7□□□□□ -1.02
RC3H2-209ENST00000495727 DENND4BO75064 1496 aaPredicted RBP8.7□□□□□ -1.02
RC3H2-209ENST00000495727 HECW1Q76N89 1606 aa8.69□□□□□ -1.02
RC3H2-209ENST00000495727 DDX11L8A8MPP1 907 aa8.69□□□□□ -1.02
RC3H2-209ENST00000495727 CD46P15529 392 aa8.69□□□□□ -1.02
RC3H2-209ENST00000495727 BRPF1P55201 1214 aaPredicted RBP8.69□□□□□ -1.02
RC3H2-209ENST00000495727 PPP4CP60510 307 aa8.69□□□□□ -1.02
RC3H2-209ENST00000495727 MMRN1Q13201 1228 aa8.69□□□□□ -1.02
RC3H2-209ENST00000495727 NEUROD2Q15784 382 aa8.69□□□□□ -1.02
RC3H2-209ENST00000495727 REPIN1Q9BWE0 567 aaKnown RBP8.69□□□□□ -1.02
RC3H2-209ENST00000495727 TCOF1Q13428 1488 aaKnown RBP8.69□□□□□ -1.02
RC3H2-209ENST00000495727 SSTR3P32745 418 aaPredicted RBP8.68□□□□□ -1.02
RC3H2-209ENST00000495727 RDH13Q8NBN7 331 aa8.68□□□□□ -1.02
RC3H2-209ENST00000495727 KDM4CQ9H3R0 1056 aa8.68□□□□□ -1.02
RC3H2-209ENST00000495727 HCSTQ9UBK5 93 aa8.68□□□□□ -1.02
RC3H2-209ENST00000495727 PLA2R1Q13018 1463 aa8.68□□□□□ -1.02
RC3H2-209ENST00000495727 LRP5O75197 1615 aa8.68□□□□□ -1.02
RC3H2-209ENST00000495727 KMT5BQ4FZB7 885 aa8.67□□□□□ -1.02
RC3H2-209ENST00000495727 MAGI2Q86UL8 1455 aa8.67□□□□□ -1.02
RC3H2-209ENST00000495727 MYO3AQ8NEV4 1616 aa8.67□□□□□ -1.02
RC3H2-209ENST00000495727 LRRC7Q96NW7 1537 aa8.67□□□□□ -1.02
RC3H2-209ENST00000495727 RAPGEF6Q8TEU7 1601 aa8.66□□□□□ -1.02
RC3H2-209ENST00000495727 UGGT2Q9NYU1 1516 aa8.66□□□□□ -1.02
RC3H2-209ENST00000495727 CFHP08603 1231 aa8.66□□□□□ -1.02
RC3H2-209ENST00000495727 SLC10A3P09131 477 aa8.66□□□□□ -1.02
RC3H2-209ENST00000495727 DDRGK1Q96HY6 314 aa8.66□□□□□ -1.02
RC3H2-209ENST00000495727 TRAPPC8Q9Y2L5 1435 aa8.65□□□□□ -1.02
RC3H2-209ENST00000495727 MS4A1P11836 297 aa8.65□□□□□ -1.02
RC3H2-209ENST00000495727 GCGRP47871 477 aa8.65□□□□□ -1.02
RC3H2-209ENST00000495727 DIXDC1Q155Q3 683 aa8.65□□□□□ -1.02
RC3H2-209ENST00000495727 GPBP1L1Q9HC44 474 aaPredicted RBP8.65□□□□□ -1.02
RC3H2-209ENST00000495727 WBP1LQ9NX94 342 aa8.65□□□□□ -1.02
RC3H2-209ENST00000495727 C9orf84Q5VXU9 1444 aa8.64□□□□□ -1.03
RC3H2-209ENST00000495727 USP46P62068 366 aa8.64□□□□□ -1.03
RC3H2-209ENST00000495727 SHANK2Q9UPX8 1470 aa8.64□□□□□ -1.03
RC3H2-209ENST00000495727 RAPGEF2Q9Y4G8 1499 aa8.64□□□□□ -1.03
RC3H2-209ENST00000495727 STRCP1A6NGW2 1772 aa8.63□□□□□ -1.03
RC3H2-209ENST00000495727 MROH2AA6NES4 1674 aa8.63□□□□□ -1.03
RC3H2-209ENST00000495727 VWDEQ8N2E2 1590 aa8.63□□□□□ -1.03
RC3H2-209ENST00000495727 SYNMO15061 1565 aa8.62□□□□□ -1.03
RC3H2-209ENST00000495727 NEURL4Q96JN8 1562 aa8.62□□□□□ -1.03
RC3H2-209ENST00000495727 CEP170BQ9Y4F5 1589 aaPredicted RBP8.62□□□□□ -1.03
RC3H2-209ENST00000495727 ACTN4O43707 911 aaKnown RBP8.62□□□□□ -1.03
RC3H2-209ENST00000495727 PTPN5P54829 565 aa8.62□□□□□ -1.03
RC3H2-209ENST00000495727 BEGAINQ9BUH8 593 aa8.62□□□□□ -1.03
RC3H2-209ENST00000495727 GRIPAP1Q4V328 841 aa8.61□□□□□ -1.03
RC3H2-209ENST00000495727 ATP10AO60312 1499 aa8.61□□□□□ -1.03
RC3H2-209ENST00000495727 KDM4AO75164 1064 aa8.6□□□□□ -1.03
RC3H2-209ENST00000495727 APLP1P51693 650 aa8.6□□□□□ -1.03
RC3H2-209ENST00000495727 NUTM1Q86Y26 1132 aa8.59□□□□□ -1.03
RC3H2-209ENST00000495727 RSPH6AQ9H0K4 717 aa8.59□□□□□ -1.03
RC3H2-209ENST00000495727 EP400Q96L91 3159 aa8.58□□□□□ -1.04
RC3H2-209ENST00000495727 GJA5P36382 358 aa8.58□□□□□ -1.04
RC3H2-209ENST00000495727 TRIM52Q96A61 297 aa8.58□□□□□ -1.04
RC3H2-209ENST00000495727 PCDHB3Q9Y5E6 796 aa8.58□□□□□ -1.04
RC3H2-209ENST00000495727 XIRP1Q702N8 1843 aaKnown RBP8.58□□□□□ -1.04
RC3H2-209ENST00000495727 CDK12Q9NYV4 1490 aaPredicted RBP8.57□□□□□ -1.04
RC3H2-209ENST00000495727 REREQ9P2R6 1566 aa8.57□□□□□ -1.04
RC3H2-209ENST00000495727 NPATQ14207 1427 aa8.57□□□□□ -1.04
RC3H2-209ENST00000495727 ATP6V1AP38606 617 aa8.57□□□□□ -1.04
RC3H2-209ENST00000495727 FUT2Q10981 343 aa8.57□□□□□ -1.04
RC3H2-209ENST00000495727 FAM117AQ9C073 453 aa8.57□□□□□ -1.04
RC3H2-209ENST00000495727 HOXA2O43364 376 aa8.56□□□□□ -1.04
RC3H2-209ENST00000495727 SPIRE2Q8WWL2 714 aa8.56□□□□□ -1.04
RC3H2-209ENST00000495727 GOPCQ9HD26 462 aa8.56□□□□□ -1.04
RC3H2-209ENST00000495727 AGLP35573 1532 aa8.55□□□□□ -1.04
RC3H2-209ENST00000495727 PLEKHG3A1L390 1219 aa8.55□□□□□ -1.04
RC3H2-209ENST00000495727 TBC1D2Q9BYX2 928 aa8.55□□□□□ -1.04
RC3H2-209ENST00000495727 IGF1RP08069 1367 aa8.55□□□□□ -1.04
RC3H2-209ENST00000495727 DIP2CQ9Y2E4 1556 aa8.54□□□□□ -1.04
RC3H2-209ENST00000495727 NR1I2O75469 434 aa8.54□□□□□ -1.04
RC3H2-209ENST00000495727 SH3D19Q5HYK7 790 aa8.54□□□□□ -1.04
RC3H2-209ENST00000495727 ROBO1Q9Y6N7 1651 aa8.53□□□□□ -1.04
RC3H2-209ENST00000495727 ATP10BO94823 1461 aa8.53□□□□□ -1.04
RC3H2-209ENST00000495727 ITGBL1O95965 494 aaPredicted RBP8.53□□□□□ -1.04
RC3H2-209ENST00000495727 TUSC1Q2TAM9 212 aa8.53□□□□□ -1.04
RC3H2-209ENST00000495727 MORN1Q5T089 497 aa8.53□□□□□ -1.04
RC3H2-209ENST00000495727 ABCA6Q8N139 1617 aa8.53□□□□□ -1.04
RC3H2-209ENST00000495727 CDK13Q14004 1512 aaKnown RBP8.53□□□□□ -1.04
RC3H2-209ENST00000495727 CTTNBP2Q8WZ74 1663 aa8.53□□□□□ -1.04
RC3H2-209ENST00000495727 KDM5CP41229 1560 aa8.52□□□□□ -1.04
RC3H2-209ENST00000495727 DNMT1P26358 1616 aaKnown RBP8.52□□□□□ -1.05
RC3H2-209ENST00000495727 Q3C1V9 767 aa8.52□□□□□ -1.05
RC3H2-209ENST00000495727 MYSM1Q5VVJ2 828 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms