RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 BACH2Q9BYV9 841 aa19.19■□□□□ 0.66
CHTOP-206ENST00000495554 NOP58Q9Y2X3 529 aaKnown RBP19.19■□□□□ 0.66
CHTOP-206ENST00000495554 RRP7AQ9Y3A4 280 aaKnown RBP19.18■□□□□ 0.66
CHTOP-206ENST00000495554 ANKRD26Q9UPS8 1709 aa19.18■□□□□ 0.66
CHTOP-206ENST00000495554 U2AF1L5P0DN76 240 aaPredicted RBP19.17■□□□□ 0.66
CHTOP-206ENST00000495554 U2AF1Q01081 240 aaKnown RBP eCLIP19.17■□□□□ 0.667e-13■■■■■ 32.8
CHTOP-206ENST00000495554 ATP7BP35670 1465 aa19.17■□□□□ 0.66
CHTOP-206ENST00000495554 KNDC1Q76NI1 1749 aa19.17■□□□□ 0.66
CHTOP-206ENST00000495554 PDE3AQ14432 1141 aa19.17■□□□□ 0.66
CHTOP-206ENST00000495554 COL3A1P02461 1466 aaPredicted RBP19.16■□□□□ 0.66
CHTOP-206ENST00000495554 CPSF1Q10570 1443 aaKnown RBP19.16■□□□□ 0.66
CHTOP-206ENST00000495554 ROBO2Q9HCK4 1378 aa19.15■□□□□ 0.66
CHTOP-206ENST00000495554 PLEKHG1Q9ULL1 1385 aa19.15■□□□□ 0.66
CHTOP-206ENST00000495554 CPS1P31327 1500 aa19.15■□□□□ 0.66
CHTOP-206ENST00000495554 NCKAP5LQ9HCH0 1330 aa19.15■□□□□ 0.66
CHTOP-206ENST00000495554 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.15■□□□□ 0.66
CHTOP-206ENST00000495554 NUDT16Q96DE0 195 aaKnown RBP19.15■□□□□ 0.66
CHTOP-206ENST00000495554 C3P01024 1663 aa19.15■□□□□ 0.66
CHTOP-206ENST00000495554 TRHP20396 242 aaPredicted RBP19.14■□□□□ 0.65
CHTOP-206ENST00000495554 PNPLA6Q8IY17 1366 aa19.14■□□□□ 0.65
CHTOP-206ENST00000495554 PPIP5K1Q6PFW1 1433 aa19.13■□□□□ 0.65
CHTOP-206ENST00000495554 FBLN1P23142 703 aa19.12■□□□□ 0.65
CHTOP-206ENST00000495554 PLEKHF1Q96S99 279 aa19.12■□□□□ 0.65
CHTOP-206ENST00000495554 KIF20BQ96Q89 1820 aa19.12■□□□□ 0.65
CHTOP-206ENST00000495554 CCDC61Q9Y6R9 512 aa19.12■□□□□ 0.65
CHTOP-206ENST00000495554 MYH16Q9H6N6 1097 aa19.11■□□□□ 0.65
CHTOP-206ENST00000495554 CANXP27824 592 aaKnown RBP19.11■□□□□ 0.65
CHTOP-206ENST00000495554 PRR36Q9H6K5 1346 aa19.11■□□□□ 0.65
CHTOP-206ENST00000495554 ADGRB2O60241 1585 aa19.1■□□□□ 0.65
CHTOP-206ENST00000495554 RARSP54136 660 aaKnown RBP19.1■□□□□ 0.65
CHTOP-206ENST00000495554 PLPPR3Q6T4P5 718 aa19.1■□□□□ 0.65
CHTOP-206ENST00000495554 SLC26A8Q96RN1 970 aa19.1■□□□□ 0.65
CHTOP-206ENST00000495554 ZBTB47Q9UFB7 747 aaPredicted RBP19.1■□□□□ 0.65
CHTOP-206ENST00000495554 SKAP1Q86WV1 359 aa19.1■□□□□ 0.65
CHTOP-206ENST00000495554 POLKQ9UBT6 870 aa19.1■□□□□ 0.65
CHTOP-206ENST00000495554 ARHGAP23Q9P227 1491 aa19.1■□□□□ 0.65
CHTOP-206ENST00000495554 PTPRUQ92729 1446 aa19.09■□□□□ 0.65
CHTOP-206ENST00000495554 EDC4Q6P2E9 1401 aaKnown RBP19.09■□□□□ 0.65
CHTOP-206ENST00000495554 SLIT1O75093 1534 aa19.09■□□□□ 0.65
CHTOP-206ENST00000495554 U2SURPO15042 1029 aaKnown RBP19.09■□□□□ 0.65
CHTOP-206ENST00000495554 PAK3O75914 559 aaPredicted RBP19.09■□□□□ 0.65
CHTOP-206ENST00000495554 FER1L4A9Z1Z3 1794 aa19.08■□□□□ 0.65
CHTOP-206ENST00000495554 EID1Q9Y6B2 187 aa19.08■□□□□ 0.64
CHTOP-206ENST00000495554 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.07■□□□□ 0.64
CHTOP-206ENST00000495554 NME9Q86XW9 330 aa19.07■□□□□ 0.64
CHTOP-206ENST00000495554 ZRANB1Q9UGI0 708 aa19.07■□□□□ 0.64
CHTOP-206ENST00000495554 DIAPH1O60610 1272 aaKnown RBP19.07■□□□□ 0.64
CHTOP-206ENST00000495554 KLHL34Q8N239 644 aa19.07■□□□□ 0.64
CHTOP-206ENST00000495554 NPM2Q86SE8 214 aaKnown RBP19.06■□□□□ 0.64
CHTOP-206ENST00000495554 CDC42BPGQ6DT37 1551 aa19.06■□□□□ 0.64
CHTOP-206ENST00000495554 FRAT1Q92837 279 aaPredicted RBP19.06■□□□□ 0.64
CHTOP-206ENST00000495554 AAMPQ13685 434 aa19.05■□□□□ 0.64
CHTOP-206ENST00000495554 TBX22Q9Y458 520 aa19.05■□□□□ 0.64
CHTOP-206ENST00000495554 MAPK8IP3Q9UPT6 1336 aa19.05■□□□□ 0.64
CHTOP-206ENST00000495554 PANK1Q8TE04 598 aa19.05■□□□□ 0.64
CHTOP-206ENST00000495554 CLUAP1Q96AJ1 413 aa19.05■□□□□ 0.64
CHTOP-206ENST00000495554 PNNQ9H307 717 aaKnown RBP19.05■□□□□ 0.64
CHTOP-206ENST00000495554 CT47B1P0C2W7 299 aaPredicted RBP19.04■□□□□ 0.64
CHTOP-206ENST00000495554 TMPOP42166 694 aaKnown RBP19.04■□□□□ 0.64
CHTOP-206ENST00000495554 THEMISQ8N1K5 641 aaPredicted RBP19.04■□□□□ 0.64
CHTOP-206ENST00000495554 COG6Q9Y2V7 657 aa19.04■□□□□ 0.64
CHTOP-206ENST00000495554 TRIM35Q9UPQ4 493 aa19.03■□□□□ 0.64
CHTOP-206ENST00000495554 AMOTL2Q9Y2J4 779 aa19.03■□□□□ 0.64
CHTOP-206ENST00000495554 MAP2P11137 1827 aaKnown RBP19.03■□□□□ 0.64
CHTOP-206ENST00000495554 ZNF692Q9BU19 519 aaPredicted RBP19.03■□□□□ 0.64
CHTOP-206ENST00000495554 MON2Q7Z3U7 1717 aa19.02■□□□□ 0.64
CHTOP-206ENST00000495554 EMILIN1Q9Y6C2 1016 aa19.02■□□□□ 0.64
CHTOP-206ENST00000495554 PPM1GO15355 546 aaPredicted RBP19.01■□□□□ 0.63
CHTOP-206ENST00000495554 AKAP12Q02952 1782 aa19.01■□□□□ 0.63
CHTOP-206ENST00000495554 FAM161AQ3B820 660 aa19.01■□□□□ 0.63
CHTOP-206ENST00000495554 IL16Q14005 1332 aa19■□□□□ 0.63
CHTOP-206ENST00000495554 AATKQ6ZMQ8 1374 aa19■□□□□ 0.63
CHTOP-206ENST00000495554 PLEKHG3A1L390 1219 aa19■□□□□ 0.63
CHTOP-206ENST00000495554 IGHDP01880 384 aa19■□□□□ 0.63
CHTOP-206ENST00000495554 NUTM2FA1L443 756 aa18.99■□□□□ 0.63
CHTOP-206ENST00000495554 FCHSD2O94868 740 aa18.99■□□□□ 0.63
CHTOP-206ENST00000495554 ARXQ96QS3 562 aa18.99■□□□□ 0.63
CHTOP-206ENST00000495554 ACEP12821 1306 aa18.98■□□□□ 0.63
CHTOP-206ENST00000495554 COG3Q96JB2 828 aa18.98■□□□□ 0.63
CHTOP-206ENST00000495554 BCL2L13Q9BXK5 485 aa18.98■□□□□ 0.63
CHTOP-206ENST00000495554 RSPH6AQ9H0K4 717 aa18.98■□□□□ 0.63
CHTOP-206ENST00000495554 RGS3P49796 1198 aa18.97■□□□□ 0.63
CHTOP-206ENST00000495554 IL13P35225 146 aa18.97■□□□□ 0.63
CHTOP-206ENST00000495554 RIPK4P57078 832 aa18.97■□□□□ 0.63
CHTOP-206ENST00000495554 RLBP1P12271 317 aa18.96■□□□□ 0.63
CHTOP-206ENST00000495554 C8orf34Q49A92 452 aa18.96■□□□□ 0.63
CHTOP-206ENST00000495554 TSR2Q969E8 191 aaKnown RBP18.96■□□□□ 0.63
CHTOP-206ENST00000495554 ITSN1Q15811 1721 aa18.96■□□□□ 0.63
CHTOP-206ENST00000495554 PMFBP1Q8TBY8 1022 aa18.96■□□□□ 0.63
CHTOP-206ENST00000495554 TTC21BQ7Z4L5 1316 aa18.96■□□□□ 0.63
CHTOP-206ENST00000495554 TOPAZ1Q8N9V7 1692 aa18.95■□□□□ 0.62
CHTOP-206ENST00000495554 RRS1Q15050 365 aaKnown RBP18.95■□□□□ 0.62
CHTOP-206ENST00000495554 DDRGK1Q96HY6 314 aa18.95■□□□□ 0.62
CHTOP-206ENST00000495554 ZKSCAN2Q63HK3 967 aa18.95■□□□□ 0.62
CHTOP-206ENST00000495554 PTCH1Q13635 1447 aa18.95■□□□□ 0.62
CHTOP-206ENST00000495554 PRKAR2BP31323 418 aa18.94■□□□□ 0.62
CHTOP-206ENST00000495554 EXOSC9Q06265 439 aaKnown RBP18.94■□□□□ 0.62
CHTOP-206ENST00000495554 LRRC7Q96NW7 1537 aa18.94■□□□□ 0.62
CHTOP-206ENST00000495554 CDK12Q9NYV4 1490 aaPredicted RBP18.94■□□□□ 0.62
CHTOP-206ENST00000495554 NEFMP07197 916 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms