RNA–Protein interactions for RNA: ENST00000495394.1

RPSA-209, Transcript of ribosomal protein SA, humanhuman

TSL 1 (best)

Gene RPSA, Length 2,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-209ENST00000495394 MORC4Q8TE76 937 aa11.74□□□□□ -0.53
RPSA-209ENST00000495394 STK24Q9Y6E0 443 aa11.74□□□□□ -0.53
RPSA-209ENST00000495394 ZRANB2O95218 330 aaKnown RBP eCLIP11.73□□□□□ -0.53
RPSA-209ENST00000495394 KIF4AO95239 1232 aa11.73□□□□□ -0.53
RPSA-209ENST00000495394 LIG1P18858 919 aa11.73□□□□□ -0.53
RPSA-209ENST00000495394 ZKSCAN2Q63HK3 967 aa11.73□□□□□ -0.53
RPSA-209ENST00000495394 MAMSTRQ6ZN01 415 aa11.73□□□□□ -0.53
RPSA-209ENST00000495394 HELBQ8NG08 1087 aaPredicted RBP11.73□□□□□ -0.53
RPSA-209ENST00000495394 RBM28Q9NW13 759 aaKnown RBP11.73□□□□□ -0.53
RPSA-209ENST00000495394 AMOTL2Q9Y2J4 779 aa11.73□□□□□ -0.53
RPSA-209ENST00000495394 FRMD4BQ9Y2L6 1034 aa11.73□□□□□ -0.53
RPSA-209ENST00000495394 PTPN23Q9H3S7 1636 aa11.73□□□□□ -0.53
RPSA-209ENST00000495394 FRMPD1Q5SYB0 1578 aa11.72□□□□□ -0.53
RPSA-209ENST00000495394 TPM2P07951 284 aa11.72□□□□□ -0.53
RPSA-209ENST00000495394 LMOD3Q0VAK6 560 aa11.72□□□□□ -0.53
RPSA-209ENST00000495394 DENND4BO75064 1496 aaPredicted RBP11.72□□□□□ -0.53
RPSA-209ENST00000495394 CAMSAP2Q08AD1 1489 aa11.72□□□□□ -0.53
RPSA-209ENST00000495394 SYCP2Q9BX26 1530 aa11.72□□□□□ -0.53
RPSA-209ENST00000495394 PRR29P0C7W0 189 aa11.72□□□□□ -0.53
RPSA-209ENST00000495394 CREBRFQ8IUR6 639 aa11.72□□□□□ -0.53
RPSA-209ENST00000495394 MAGEC2Q9UBF1 373 aaPredicted RBP11.72□□□□□ -0.53
RPSA-209ENST00000495394 FGD6Q6ZV73 1430 aa11.72□□□□□ -0.53
RPSA-209ENST00000495394 SCAPERQ9BY12 1400 aa11.72□□□□□ -0.53
RPSA-209ENST00000495394 KIAA1107Q9UPP5 1409 aa11.72□□□□□ -0.53
RPSA-209ENST00000495394 DHX57Q6P158 1386 aaKnown RBP11.71□□□□□ -0.53
RPSA-209ENST00000495394 MAP4K4O95819 1239 aaPredicted RBP11.71□□□□□ -0.53
RPSA-209ENST00000495394 POGZQ7Z3K3 1410 aa11.71□□□□□ -0.53
RPSA-209ENST00000495394 ZNF518AQ6AHZ1 1483 aa11.71□□□□□ -0.54
RPSA-209ENST00000495394 ZRSR2Q15696 482 aaKnown RBP11.71□□□□□ -0.54
RPSA-209ENST00000495394 CLEC4GQ6UXB4 293 aa11.71□□□□□ -0.54
RPSA-209ENST00000495394 BARGINQ6ZT62 677 aa11.71□□□□□ -0.54
RPSA-209ENST00000495394 RETREG2Q8NC44 543 aa11.71□□□□□ -0.54
RPSA-209ENST00000495394 BORCS6Q96GS4 357 aa11.71□□□□□ -0.54
RPSA-209ENST00000495394 ZNF777Q9ULD5 760 aaPredicted RBP11.71□□□□□ -0.54
RPSA-209ENST00000495394 ERBB3P21860 1342 aa11.7□□□□□ -0.54
RPSA-209ENST00000495394 KDM5CP41229 1560 aa11.7□□□□□ -0.54
RPSA-209ENST00000495394 ZMYM4Q5VZL5 1548 aa11.7□□□□□ -0.54
RPSA-209ENST00000495394 ARHGEF5Q12774 1597 aa11.69□□□□□ -0.54
RPSA-209ENST00000495394 IFNLR1Q8IU57 520 aaPredicted RBP11.69□□□□□ -0.54
RPSA-209ENST00000495394 STK26Q9P289 416 aa11.69□□□□□ -0.54
RPSA-209ENST00000495394 CEP126Q9P2H0 1117 aa11.69□□□□□ -0.54
RPSA-209ENST00000495394 ARHGEF12Q9NZN5 1544 aa11.69□□□□□ -0.54
RPSA-209ENST00000495394 TCOF1Q13428 1488 aaKnown RBP11.69□□□□□ -0.54
RPSA-209ENST00000495394 GOLGA6L3A6NEY3 463 aa11.69□□□□□ -0.54
RPSA-209ENST00000495394 RAB11FIP3O75154 756 aa11.69□□□□□ -0.54
RPSA-209ENST00000495394 DISP3Q9P2K9 1392 aa11.69□□□□□ -0.54
RPSA-209ENST00000495394 RPGRIP1LQ68CZ1 1315 aa11.68□□□□□ -0.54
RPSA-209ENST00000495394 PTPRMP28827 1452 aa11.68□□□□□ -0.54
RPSA-209ENST00000495394 PAX3P23760 479 aa11.67□□□□□ -0.54
RPSA-209ENST00000495394 ITFG2Q969R8 447 aa11.67□□□□□ -0.54
RPSA-209ENST00000495394 MBD5Q9P267 1494 aa11.67□□□□□ -0.54
RPSA-209ENST00000495394 CROCC2H7BZ55 1655 aa11.67□□□□□ -0.54
RPSA-209ENST00000495394 ADAMTSL3P82987 1691 aa11.67□□□□□ -0.54
RPSA-209ENST00000495394 SH3BP5O60239 455 aa11.67□□□□□ -0.54
RPSA-209ENST00000495394 FOSBP53539 338 aa11.67□□□□□ -0.54
RPSA-209ENST00000495394 ZNF644Q9H582 1327 aaPredicted RBP11.67□□□□□ -0.54
RPSA-209ENST00000495394 CCDC141Q6ZP82 1450 aa11.66□□□□□ -0.54
RPSA-209ENST00000495394 CREB3O43889 395 aa11.66□□□□□ -0.54
RPSA-209ENST00000495394 LETM1O95202 739 aaPredicted RBP11.66□□□□□ -0.54
RPSA-209ENST00000495394 RAPGEF3O95398 923 aa11.66□□□□□ -0.54
RPSA-209ENST00000495394 UVSSAQ2YD98 709 aa11.66□□□□□ -0.54
RPSA-209ENST00000495394 PROCA1Q8NCQ7 364 aaPredicted RBP11.66□□□□□ -0.54
RPSA-209ENST00000495394 CCDC97Q96F63 343 aaPredicted RBP11.66□□□□□ -0.54
RPSA-209ENST00000495394 PNNQ9H307 717 aaKnown RBP11.66□□□□□ -0.54
RPSA-209ENST00000495394 TRAPPC8Q9Y2L5 1435 aa11.66□□□□□ -0.54
RPSA-209ENST00000495394 MAGI2Q86UL8 1455 aa11.66□□□□□ -0.54
RPSA-209ENST00000495394 DNMT1P26358 1616 aaKnown RBP11.66□□□□□ -0.54
RPSA-209ENST00000495394 IPO8O15397 1037 aaKnown RBP11.66□□□□□ -0.54
RPSA-209ENST00000495394 ZNF662Q6ZS27 426 aa11.66□□□□□ -0.54
RPSA-209ENST00000495394 ZCRB1Q8TBF4 217 aaKnown RBP11.66□□□□□ -0.54
RPSA-209ENST00000495394 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.65□□□□□ -0.549e-8■■■□□ 15.5
RPSA-209ENST00000495394 PUS10Q3MIT2 529 aaKnown RBP11.65□□□□□ -0.54
RPSA-209ENST00000495394 ARHGEF10LQ9HCE6 1279 aa11.65□□□□□ -0.54
RPSA-209ENST00000495394 INO80Q9ULG1 1556 aaPredicted RBP11.65□□□□□ -0.54
RPSA-209ENST00000495394 ARHGEF40Q8TER5 1519 aa11.65□□□□□ -0.55
RPSA-209ENST00000495394 HNRNPMP52272 730 aaKnown RBP eCLIP11.64□□□□□ -0.55
RPSA-209ENST00000495394 WDR70Q9NW82 654 aa11.64□□□□□ -0.55
RPSA-209ENST00000495394 KIDINS220Q9ULH0 1771 aa11.64□□□□□ -0.55
RPSA-209ENST00000495394 GTPBP4Q9BZE4 634 aaKnown RBP11.64□□□□□ -0.55
RPSA-209ENST00000495394 MLH3Q9UHC1 1453 aa11.64□□□□□ -0.55
RPSA-209ENST00000495394 ZFYVE16Q7Z3T8 1539 aa11.64□□□□□ -0.55
RPSA-209ENST00000495394 CT47B1P0C2W7 299 aaPredicted RBP11.63□□□□□ -0.55
RPSA-209ENST00000495394 SMC5Q8IY18 1101 aa11.63□□□□□ -0.55
RPSA-209ENST00000495394 CEP83Q9Y592 693 aa11.63□□□□□ -0.55
RPSA-209ENST00000495394 MAST1Q9Y2H9 1570 aa11.63□□□□□ -0.55
RPSA-209ENST00000495394 ATP7AQ04656 1500 aa11.63□□□□□ -0.55
RPSA-209ENST00000495394 APLP1P51693 650 aa11.63□□□□□ -0.55
RPSA-209ENST00000495394 ILDR2Q71H61 639 aa11.63□□□□□ -0.55
RPSA-209ENST00000495394 AFAP1Q8N556 730 aa11.63□□□□□ -0.55
RPSA-209ENST00000495394 FAM210AQ96ND0 272 aa11.63□□□□□ -0.55
RPSA-209ENST00000495394 CCDC85AQ96PX6 553 aaPredicted RBP11.63□□□□□ -0.55
RPSA-209ENST00000495394 MAF1Q9H063 256 aa11.63□□□□□ -0.55
RPSA-209ENST00000495394 METTL14Q9HCE5 456 aaKnown RBP11.63□□□□□ -0.55
RPSA-209ENST00000495394 SHANK2Q9UPX8 1470 aa11.62□□□□□ -0.55
RPSA-209ENST00000495394 CERKQ8TCT0 537 aa11.62□□□□□ -0.55
RPSA-209ENST00000495394 PAIP2Q9BPZ3 127 aaKnown RBP11.62□□□□□ -0.55
RPSA-209ENST00000495394 SPATA31D1Q6ZQQ2 1576 aa11.61□□□□□ -0.55
RPSA-209ENST00000495394 ABCA6Q8N139 1617 aa11.61□□□□□ -0.55
RPSA-209ENST00000495394 PPP4R3CPQ6ZMV5 832 aa11.61□□□□□ -0.55
RPSA-209ENST00000495394 EP400NLQ6ZTU2 488 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms