RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 NHSL1Q5SYE7 1610 aa15.51■□□□□ 0.07
BRCA1-222ENST00000493919 ANKARQ7Z5J8 1434 aa15.51■□□□□ 0.07
BRCA1-222ENST00000493919 AHDC1Q5TGY3 1603 aaPredicted RBP15.51■□□□□ 0.07
BRCA1-222ENST00000493919 MSH5O43196 834 aa15.51■□□□□ 0.07
BRCA1-222ENST00000493919 SRPK2P78362 688 aaKnown RBP15.51■□□□□ 0.07
BRCA1-222ENST00000493919 DDX17Q92841 729 aaKnown RBP15.51■□□□□ 0.07
BRCA1-222ENST00000493919 CDK19Q9BWU1 502 aa15.51■□□□□ 0.07
BRCA1-222ENST00000493919 ITSN1Q15811 1721 aa15.5■□□□□ 0.07
BRCA1-222ENST00000493919 ATP7BP35670 1465 aa15.5■□□□□ 0.07
BRCA1-222ENST00000493919 KIF1AQ12756 1690 aa15.5■□□□□ 0.07
BRCA1-222ENST00000493919 YTHDC1Q96MU7 727 aaKnown RBP15.5■□□□□ 0.07
BRCA1-222ENST00000493919 PRR36Q9H6K5 1346 aa15.49■□□□□ 0.07
BRCA1-222ENST00000493919 ST20-MTHFSA0A0A6YYL1 179 aa15.49■□□□□ 0.07
BRCA1-222ENST00000493919 COL16A1Q07092 1604 aaPredicted RBP15.49■□□□□ 0.07
BRCA1-222ENST00000493919 IL27Q8NEV9 243 aa15.49■□□□□ 0.07
BRCA1-222ENST00000493919 CABP2Q9NPB3 220 aa15.49■□□□□ 0.07
BRCA1-222ENST00000493919 EVC2Q86UK5 1308 aa15.48■□□□□ 0.07
BRCA1-222ENST00000493919 SBNO2Q9Y2G9 1366 aa15.48■□□□□ 0.07
BRCA1-222ENST00000493919 TOPAZ1Q8N9V7 1692 aa15.47■□□□□ 0.07
BRCA1-222ENST00000493919 C11orf95C9JLR9 678 aaPredicted RBP15.47■□□□□ 0.07
BRCA1-222ENST00000493919 PMFBP1Q8TBY8 1022 aa15.47■□□□□ 0.07
BRCA1-222ENST00000493919 NUDT16Q96DE0 195 aaKnown RBP15.47■□□□□ 0.07
BRCA1-222ENST00000493919 PHF8Q9UPP1 1060 aa15.47■□□□□ 0.07
BRCA1-222ENST00000493919 FOXO3O43524 673 aa15.46■□□□□ 0.07
BRCA1-222ENST00000493919 XPCQ01831 940 aaPredicted RBP15.46■□□□□ 0.07
BRCA1-222ENST00000493919 TEX2Q8IWB9 1127 aa15.46■□□□□ 0.07
BRCA1-222ENST00000493919 NPHP3Q7Z494 1330 aa15.45■□□□□ 0.06
BRCA1-222ENST00000493919 CHRM1P11229 460 aaPredicted RBP15.44■□□□□ 0.06
BRCA1-222ENST00000493919 PPIP5K1Q6PFW1 1433 aa15.44■□□□□ 0.06
BRCA1-222ENST00000493919 EIF4G2P78344 907 aaKnown RBP eCLIP15.43■□□□□ 0.06
BRCA1-222ENST00000493919 TESK2Q96S53 571 aa15.43■□□□□ 0.06
BRCA1-222ENST00000493919 NGDNQ8NEJ9 315 aaKnown RBP15.42■□□□□ 0.06
BRCA1-222ENST00000493919 PXDNQ92626 1479 aa15.42■□□□□ 0.06
BRCA1-222ENST00000493919 DISP3Q9P2K9 1392 aa15.42■□□□□ 0.06
BRCA1-222ENST00000493919 HSPA5P11021 654 aaKnown RBP15.41■□□□□ 0.06
BRCA1-222ENST00000493919 CCDC61Q9Y6R9 512 aa15.41■□□□□ 0.06
BRCA1-222ENST00000493919 ATAD2Q6PL18 1390 aa15.4■□□□□ 0.06
BRCA1-222ENST00000493919 SOS2Q07890 1332 aaPredicted RBP15.4■□□□□ 0.06
BRCA1-222ENST00000493919 TMF1P82094 1093 aa15.39■□□□□ 0.05
BRCA1-222ENST00000493919 PSME1Q06323 249 aa15.39■□□□□ 0.05
BRCA1-222ENST00000493919 JCADQ9P266 1359 aa15.39■□□□□ 0.05
BRCA1-222ENST00000493919 SHPRHQ149N8 1683 aa15.39■□□□□ 0.05
BRCA1-222ENST00000493919 KRT28Q7Z3Y7 464 aa15.38■□□□□ 0.05
BRCA1-222ENST00000493919 LRRC59Q96AG4 307 aaKnown RBP15.38■□□□□ 0.05
BRCA1-222ENST00000493919 CABP1Q9NZU7 370 aa15.38■□□□□ 0.05
BRCA1-222ENST00000493919 ACEP12821 1306 aa15.38■□□□□ 0.05
BRCA1-222ENST00000493919 RRP9O43818 475 aaKnown RBP15.37■□□□□ 0.05
BRCA1-222ENST00000493919 TMC1Q8TDI8 760 aa15.37■□□□□ 0.05
BRCA1-222ENST00000493919 LMOD2Q6P5Q4 547 aa15.37■□□□□ 0.05
BRCA1-222ENST00000493919 TRPM3Q9HCF6 1732 aaPredicted RBP15.36■□□□□ 0.05
BRCA1-222ENST00000493919 POLR3AO14802 1390 aaPredicted RBP15.36■□□□□ 0.05
BRCA1-222ENST00000493919 POLR3GLQ9BT43 218 aa15.36■□□□□ 0.05
BRCA1-222ENST00000493919 TNS3Q68CZ2 1445 aa15.35■□□□□ 0.05
BRCA1-222ENST00000493919 PNPLA6Q8IY17 1366 aa15.35■□□□□ 0.05
BRCA1-222ENST00000493919 PAK3O75914 559 aaPredicted RBP15.35■□□□□ 0.05
BRCA1-222ENST00000493919 PLEKHG3A1L390 1219 aa15.35■□□□□ 0.05
BRCA1-222ENST00000493919 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.35■□□□□ 0.05
BRCA1-222ENST00000493919 ZFP91Q96JP5 570 aaPredicted RBP15.35■□□□□ 0.05
BRCA1-222ENST00000493919 CCDC9Q9Y3X0 531 aaKnown RBP15.34■□□□□ 0.05
BRCA1-222ENST00000493919 AKAP12Q02952 1782 aa15.33■□□□□ 0.05
BRCA1-222ENST00000493919 CDCA8Q53HL2 280 aa15.33■□□□□ 0.05
BRCA1-222ENST00000493919 MED1Q15648 1581 aaPredicted RBP15.33■□□□□ 0.04
BRCA1-222ENST00000493919 SPATA31A3Q5VYP0 1347 aa15.33■□□□□ 0.04
BRCA1-222ENST00000493919 NUTM2BA6NNL0 878 aaPredicted RBP15.33■□□□□ 0.04
BRCA1-222ENST00000493919 NUTM2EB1AL46 878 aaPredicted RBP15.33■□□□□ 0.04
BRCA1-222ENST00000493919 NCLP19338 710 aaKnown RBP15.33■□□□□ 0.04
BRCA1-222ENST00000493919 NUTM2AQ8IVF1 878 aaPredicted RBP15.33■□□□□ 0.04
BRCA1-222ENST00000493919 FTSJ3Q8IY81 847 aaKnown RBP15.33■□□□□ 0.04
BRCA1-222ENST00000493919 BBXQ8WY36 941 aaPredicted RBP15.33■□□□□ 0.04
BRCA1-222ENST00000493919 ARID3AQ99856 593 aa15.33■□□□□ 0.04
BRCA1-222ENST00000493919 SBNO1A3KN83 1393 aa15.32■□□□□ 0.04
BRCA1-222ENST00000493919 MYOM1P52179 1685 aa15.32■□□□□ 0.04
BRCA1-222ENST00000493919 ALS2Q96Q42 1657 aa15.32■□□□□ 0.04
BRCA1-222ENST00000493919 COL22A1Q8NFW1 1626 aaPredicted RBP15.32■□□□□ 0.04
BRCA1-222ENST00000493919 USP6P35125 1406 aa15.31■□□□□ 0.04
BRCA1-222ENST00000493919 SLC12A5Q9H2X9 1139 aa15.31■□□□□ 0.04
BRCA1-222ENST00000493919 SPATA31A6Q5VVP1 1343 aa15.31■□□□□ 0.04
BRCA1-222ENST00000493919 MON2Q7Z3U7 1717 aa15.31■□□□□ 0.04
BRCA1-222ENST00000493919 ARHGEF10O15013 1369 aa15.31■□□□□ 0.04
BRCA1-222ENST00000493919 KTN1Q86UP2 1357 aaKnown RBP15.31■□□□□ 0.04
BRCA1-222ENST00000493919 LRP6O75581 1613 aa15.3■□□□□ 0.04
BRCA1-222ENST00000493919 PUS7Q96PZ0 661 aaKnown RBP15.3■□□□□ 0.04
BRCA1-222ENST00000493919 NINLQ9Y2I6 1382 aa15.3■□□□□ 0.04
BRCA1-222ENST00000493919 NRKQ7Z2Y5 1582 aa15.3■□□□□ 0.04
BRCA1-222ENST00000493919 HDGFL2Q7Z4V5 671 aaPredicted RBP15.29■□□□□ 0.04
BRCA1-222ENST00000493919 A0A1W2PP64 1363 aa15.29■□□□□ 0.04
BRCA1-222ENST00000493919 CD163L1Q9NR16 1453 aa15.29■□□□□ 0.04
BRCA1-222ENST00000493919 TICAM2Q86XR7 235 aa15.29■□□□□ 0.04
BRCA1-222ENST00000493919 CPSF1Q10570 1443 aaKnown RBP15.28■□□□□ 0.04
BRCA1-222ENST00000493919 MEX3CQ5U5Q3 659 aaKnown RBP15.28■□□□□ 0.04
BRCA1-222ENST00000493919 NUTM2GQ5VZR2 741 aa15.28■□□□□ 0.04
BRCA1-222ENST00000493919 CHMP4BQ9H444 224 aaKnown RBP15.28■□□□□ 0.04
BRCA1-222ENST00000493919 TERF2IPQ9NYB0 399 aa15.28■□□□□ 0.04
BRCA1-222ENST00000493919 ABCA3Q99758 1704 aa15.28■□□□□ 0.04
BRCA1-222ENST00000493919 CANXP27824 592 aaKnown RBP15.27■□□□□ 0.04
BRCA1-222ENST00000493919 CABLES1Q8TDN4 633 aa15.27■□□□□ 0.03
BRCA1-222ENST00000493919 ZNF692Q9BU19 519 aaPredicted RBP15.27■□□□□ 0.03
BRCA1-222ENST00000493919 PIK3C2AO00443 1686 aa15.26■□□□□ 0.03
BRCA1-222ENST00000493919 ADAMTS2O95450 1211 aa15.26■□□□□ 0.03
BRCA1-222ENST00000493919 ABTB2Q8N961 1025 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms