RNA–Protein interactions for RNA: ENST00000493518.5

CACUL1-206, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 3,217 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-206ENST00000493518 TRIM44Q96DX7 344 aaPredicted RBP19.5■□□□□ 0.71
CACUL1-206ENST00000493518 ABCA6Q8N139 1617 aa19.5■□□□□ 0.71
CACUL1-206ENST00000493518 ZFYVE16Q7Z3T8 1539 aa19.5■□□□□ 0.71
CACUL1-206ENST00000493518 RSPH6AQ9H0K4 717 aa19.49■□□□□ 0.71
CACUL1-206ENST00000493518 TERF2IPQ9NYB0 399 aa19.49■□□□□ 0.71
CACUL1-206ENST00000493518 NCKAP5LQ9HCH0 1330 aa19.49■□□□□ 0.71
CACUL1-206ENST00000493518 ATP7AQ04656 1500 aa19.49■□□□□ 0.71
CACUL1-206ENST00000493518 SPHKAPQ2M3C7 1700 aa19.49■□□□□ 0.71
CACUL1-206ENST00000493518 RRS1Q15050 365 aaKnown RBP19.49■□□□□ 0.71
CACUL1-206ENST00000493518 KRT24Q2M2I5 525 aa19.49■□□□□ 0.71
CACUL1-206ENST00000493518 C16orf71Q8IYS4 520 aaPredicted RBP19.48■□□□□ 0.71
CACUL1-206ENST00000493518 FOXD4L6Q3SYB3 417 aaPredicted RBP19.48■□□□□ 0.71
CACUL1-206ENST00000493518 FOXD4L3Q6VB84 417 aaPredicted RBP19.48■□□□□ 0.71
CACUL1-206ENST00000493518 NOL8Q76FK4 1167 aaKnown RBP19.48■□□□□ 0.71
CACUL1-206ENST00000493518 CDK19Q9BWU1 502 aa19.48■□□□□ 0.71
CACUL1-206ENST00000493518 HDGFL2Q7Z4V5 671 aaPredicted RBP19.47■□□□□ 0.71
CACUL1-206ENST00000493518 PLEKHF1Q96S99 279 aa19.47■□□□□ 0.71
CACUL1-206ENST00000493518 ZCCHC11Q5TAX3 1644 aaKnown RBP19.47■□□□□ 0.71
CACUL1-206ENST00000493518 CLASP1Q7Z460 1538 aa19.47■□□□□ 0.71
CACUL1-206ENST00000493518 SSFA2P28290 1259 aa19.47■□□□□ 0.71
CACUL1-206ENST00000493518 CCDC27Q2M243 656 aa19.47■□□□□ 0.71
CACUL1-206ENST00000493518 CHAMP1Q96JM3 812 aa19.47■□□□□ 0.71
CACUL1-206ENST00000493518 GRPEL1Q9HAV7 217 aa19.47■□□□□ 0.71
CACUL1-206ENST00000493518 CD109Q6YHK3 1445 aa19.47■□□□□ 0.71
CACUL1-206ENST00000493518 CEP152O94986 1710 aa19.46■□□□□ 0.71
CACUL1-206ENST00000493518 GAS2L3Q86XJ1 694 aa19.46■□□□□ 0.71
CACUL1-206ENST00000493518 SMC5Q8IY18 1101 aa19.46■□□□□ 0.71
CACUL1-206ENST00000493518 ZNF518AQ6AHZ1 1483 aa19.46■□□□□ 0.71
CACUL1-206ENST00000493518 HDAC1Q13547 482 aaPredicted RBP19.46■□□□□ 0.7
CACUL1-206ENST00000493518 TBC1D9Q6ZT07 1266 aa19.45■□□□□ 0.7
CACUL1-206ENST00000493518 NPATQ14207 1427 aa19.44■□□□□ 0.7
CACUL1-206ENST00000493518 SMARCA5O60264 1052 aaPredicted RBP19.44■□□□□ 0.7
CACUL1-206ENST00000493518 NUCB1Q02818 461 aa19.44■□□□□ 0.7
CACUL1-206ENST00000493518 ANKRD36BQ8N2N9 1353 aa19.44■□□□□ 0.7
CACUL1-206ENST00000493518 KIF16BQ96L93 1317 aa19.44■□□□□ 0.7
CACUL1-206ENST00000493518 ARID3AQ99856 593 aa19.44■□□□□ 0.7
CACUL1-206ENST00000493518 RTEL1-TNFRSF6BF6WH68 1400 aa19.43■□□□□ 0.7
CACUL1-206ENST00000493518 MAP3K4Q9Y6R4 1608 aa19.43■□□□□ 0.7
CACUL1-206ENST00000493518 OTUD7AQ8TE49 926 aaPredicted RBP19.43■□□□□ 0.7
CACUL1-206ENST00000493518 PLEKHG5O94827 1062 aa19.42■□□□□ 0.7
CACUL1-206ENST00000493518 NME9Q86XW9 330 aa19.42■□□□□ 0.7
CACUL1-206ENST00000493518 GAS2L2Q8NHY3 880 aa19.42■□□□□ 0.7
CACUL1-206ENST00000493518 MIS18AQ9NYP9 233 aa19.42■□□□□ 0.7
CACUL1-206ENST00000493518 C8orf58Q8NAV2 365 aa19.42■□□□□ 0.7
CACUL1-206ENST00000493518 DDX49Q9Y6V7 483 aaKnown RBP19.42■□□□□ 0.7
CACUL1-206ENST00000493518 DDX11L8A8MPP1 907 aa19.41■□□□□ 0.7
CACUL1-206ENST00000493518 AAMPQ13685 434 aa19.41■□□□□ 0.7
CACUL1-206ENST00000493518 TWISTNBQ3B726 338 aaPredicted RBP19.4■□□□□ 0.7
CACUL1-206ENST00000493518 SLC4A10Q6U841 1118 aa19.4■□□□□ 0.7
CACUL1-206ENST00000493518 GBP4Q96PP9 640 aa19.4■□□□□ 0.7
CACUL1-206ENST00000493518 MRE11P49959 708 aa19.4■□□□□ 0.7
CACUL1-206ENST00000493518 MCTP1Q6DN14 999 aa19.4■□□□□ 0.7
CACUL1-206ENST00000493518 NECTIN2Q92692 538 aa19.4■□□□□ 0.7
CACUL1-206ENST00000493518 TSHZ3Q63HK5 1081 aa19.39■□□□□ 0.69
CACUL1-206ENST00000493518 MBIPQ9NS73 344 aa19.39■□□□□ 0.69
CACUL1-206ENST00000493518 SIRT2Q8IXJ6 389 aa19.38■□□□□ 0.69
CACUL1-206ENST00000493518 POLKQ9UBT6 870 aa19.38■□□□□ 0.69
CACUL1-206ENST00000493518 ASXL2Q76L83 1435 aa19.38■□□□□ 0.69
CACUL1-206ENST00000493518 ZBTB7BO15156 539 aaPredicted RBP19.38■□□□□ 0.69
CACUL1-206ENST00000493518 ERBB4Q15303 1308 aa19.38■□□□□ 0.69
CACUL1-206ENST00000493518 VAMP4O75379 141 aa19.37■□□□□ 0.69
CACUL1-206ENST00000493518 PKP1Q13835 747 aa19.37■□□□□ 0.69
CACUL1-206ENST00000493518 IQSEC2Q5JU85 1478 aa19.37■□□□□ 0.69
CACUL1-206ENST00000493518 TET3O43151 1660 aa19.37■□□□□ 0.69
CACUL1-206ENST00000493518 FSD2A1L4K1 749 aa19.36■□□□□ 0.69
CACUL1-206ENST00000493518 MPNDQ8N594 471 aa19.36■□□□□ 0.69
CACUL1-206ENST00000493518 ZNF692Q9BU19 519 aaPredicted RBP19.36■□□□□ 0.69
CACUL1-206ENST00000493518 ESPNB1AK53 854 aa19.35■□□□□ 0.69
CACUL1-206ENST00000493518 K7ELQ4 463 aaPredicted RBP19.35■□□□□ 0.69
CACUL1-206ENST00000493518 CAVIN1Q6NZI2 390 aaKnown RBP19.35■□□□□ 0.69
CACUL1-206ENST00000493518 MCM10Q7L590 875 aa19.35■□□□□ 0.69
CACUL1-206ENST00000493518 MROH2AA6NES4 1674 aa19.35■□□□□ 0.69
CACUL1-206ENST00000493518 SBNO2Q9Y2G9 1366 aa19.35■□□□□ 0.69
CACUL1-206ENST00000493518 TXNDC2Q86VQ3 553 aa19.34■□□□□ 0.69
CACUL1-206ENST00000493518 AEBP1Q8IUX7 1158 aa19.34■□□□□ 0.69
CACUL1-206ENST00000493518 MYOM2P54296 1465 aa19.34■□□□□ 0.69
CACUL1-206ENST00000493518 DTNBO60941 627 aa19.34■□□□□ 0.69
CACUL1-206ENST00000493518 MRPL50Q8N5N7 158 aaKnown RBP19.34■□□□□ 0.69
CACUL1-206ENST00000493518 KIF2CQ99661 725 aa19.33■□□□□ 0.69
CACUL1-206ENST00000493518 KIF1BO60333 1816 aa19.33■□□□□ 0.68
CACUL1-206ENST00000493518 GOLGA6L22H0YM25 854 aa19.33■□□□□ 0.68
CACUL1-206ENST00000493518 FCHSD2O94868 740 aa19.32■□□□□ 0.68
CACUL1-206ENST00000493518 NFE2L2Q16236 605 aa19.32■□□□□ 0.68
CACUL1-206ENST00000493518 BMP2KLQ5H9B9 411 aa19.32■□□□□ 0.68
CACUL1-206ENST00000493518 CT47B1P0C2W7 299 aaPredicted RBP19.32■□□□□ 0.68
CACUL1-206ENST00000493518 SHPRHQ149N8 1683 aa19.32■□□□□ 0.68
CACUL1-206ENST00000493518 PPIP5K1Q6PFW1 1433 aa19.32■□□□□ 0.68
CACUL1-206ENST00000493518 GSPT1P15170 499 aaKnown RBP19.32■□□□□ 0.68
CACUL1-206ENST00000493518 RBM25P49756 843 aaKnown RBP19.31■□□□□ 0.68
CACUL1-206ENST00000493518 RBM27Q9P2N5 1060 aaKnown RBP19.31■□□□□ 0.68
CACUL1-206ENST00000493518 ZGPATQ8N5A5 531 aaKnown RBP19.3■□□□□ 0.68
CACUL1-206ENST00000493518 F6X3S4 739 aa19.3■□□□□ 0.68
CACUL1-206ENST00000493518 ANP32BQ92688 251 aaKnown RBP19.3■□□□□ 0.68
CACUL1-206ENST00000493518 CDC45O75419 566 aa19.3■□□□□ 0.68
CACUL1-206ENST00000493518 PPRC1Q5VV67 1664 aaKnown RBP19.3■□□□□ 0.68
CACUL1-206ENST00000493518 GNAI1P63096 354 aa19.29■□□□□ 0.68
CACUL1-206ENST00000493518 RNF214Q8ND24 703 aa19.29■□□□□ 0.68
CACUL1-206ENST00000493518 PRPF40AO75400 957 aaKnown RBP19.29■□□□□ 0.68
CACUL1-206ENST00000493518 NASPP49321 788 aaPredicted RBP19.29■□□□□ 0.68
CACUL1-206ENST00000493518 SULT6B1Q6IMI4 303 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms