RNA–Protein interactions for RNA: ENST00000491680.6

LCLAT1-211, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 2

Gene LCLAT1, Length 1,610 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-211ENST00000491680 CDK19Q9BWU1 502 aa15.56■□□□□ 0.08
LCLAT1-211ENST00000491680 PRR36Q9H6K5 1346 aa15.55■□□□□ 0.08
LCLAT1-211ENST00000491680 PSME1Q06323 249 aa15.55■□□□□ 0.08
LCLAT1-211ENST00000491680 COL22A1Q8NFW1 1626 aaPredicted RBP15.55■□□□□ 0.08
LCLAT1-211ENST00000491680 ATP7BP35670 1465 aa15.54■□□□□ 0.08
LCLAT1-211ENST00000491680 SRPK2P78362 688 aaKnown RBP15.54■□□□□ 0.08
LCLAT1-211ENST00000491680 NUDT16Q96DE0 195 aaKnown RBP15.54■□□□□ 0.08
LCLAT1-211ENST00000491680 NGDNQ8NEJ9 315 aaKnown RBP15.53■□□□□ 0.08
LCLAT1-211ENST00000491680 TOPAZ1Q8N9V7 1692 aa15.52■□□□□ 0.08
LCLAT1-211ENST00000491680 SLC24A1O60721 1099 aa15.52■□□□□ 0.08
LCLAT1-211ENST00000491680 CDCA8Q53HL2 280 aa15.51■□□□□ 0.07
LCLAT1-211ENST00000491680 LMOD2Q6P5Q4 547 aa15.51■□□□□ 0.07
LCLAT1-211ENST00000491680 SPATA31A3Q5VYP0 1347 aa15.51■□□□□ 0.07
LCLAT1-211ENST00000491680 TNS3Q68CZ2 1445 aa15.51■□□□□ 0.07
LCLAT1-211ENST00000491680 ADAMTS2O95450 1211 aa15.5■□□□□ 0.07
LCLAT1-211ENST00000491680 PRKRIP1Q9H875 184 aaPredicted RBP15.5■□□□□ 0.07
LCLAT1-211ENST00000491680 HNRNPUQ00839 825 aaKnown RBP eCLIP15.5■□□□□ 0.07
LCLAT1-211ENST00000491680 CABP2Q9NPB3 220 aa15.5■□□□□ 0.07
LCLAT1-211ENST00000491680 EVC2Q86UK5 1308 aa15.49■□□□□ 0.07
LCLAT1-211ENST00000491680 TRPM3Q9HCF6 1732 aaPredicted RBP15.49■□□□□ 0.07
LCLAT1-211ENST00000491680 MARF1Q9Y4F3 1742 aaKnown RBP15.49■□□□□ 0.07
LCLAT1-211ENST00000491680 SBNO1A3KN83 1393 aa15.49■□□□□ 0.07
LCLAT1-211ENST00000491680 C8orf37Q96NL8 207 aa15.49■□□□□ 0.07
LCLAT1-211ENST00000491680 CCDC61Q9Y6R9 512 aa15.49■□□□□ 0.07
LCLAT1-211ENST00000491680 HAP1P54257 671 aaPredicted RBP15.48■□□□□ 0.07
LCLAT1-211ENST00000491680 ZNF772Q68DY9 489 aaPredicted RBP15.48■□□□□ 0.07
LCLAT1-211ENST00000491680 PER1O15534 1290 aaPredicted RBP15.47■□□□□ 0.07
LCLAT1-211ENST00000491680 PLEKHG5O94827 1062 aa15.47■□□□□ 0.07
LCLAT1-211ENST00000491680 PPIP5K1Q6PFW1 1433 aa15.47■□□□□ 0.07
LCLAT1-211ENST00000491680 ARHGEF10O15013 1369 aa15.47■□□□□ 0.07
LCLAT1-211ENST00000491680 PAK3O75914 559 aaPredicted RBP15.46■□□□□ 0.07
LCLAT1-211ENST00000491680 POTEAQ6S8J7 498 aa15.46■□□□□ 0.07
LCLAT1-211ENST00000491680 MYOM1P52179 1685 aa15.46■□□□□ 0.07
LCLAT1-211ENST00000491680 AFF2P51816 1311 aa15.46■□□□□ 0.07
LCLAT1-211ENST00000491680 NGLY1Q96IV0 654 aa15.46■□□□□ 0.06
LCLAT1-211ENST00000491680 PUS7Q96PZ0 661 aaKnown RBP15.46■□□□□ 0.06
LCLAT1-211ENST00000491680 PANK3Q9H999 370 aa15.46■□□□□ 0.06
LCLAT1-211ENST00000491680 ALS2Q96Q42 1657 aa15.46■□□□□ 0.06
LCLAT1-211ENST00000491680 ACEP12821 1306 aa15.46■□□□□ 0.06
LCLAT1-211ENST00000491680 ABCA3Q99758 1704 aa15.45■□□□□ 0.06
LCLAT1-211ENST00000491680 ANP32EQ9BTT0 268 aa15.45■□□□□ 0.06
LCLAT1-211ENST00000491680 ZBED9Q6R2W3 1325 aa15.45■□□□□ 0.06
LCLAT1-211ENST00000491680 PLEKHG3A1L390 1219 aa15.44■□□□□ 0.06
LCLAT1-211ENST00000491680 POLR3AO14802 1390 aaPredicted RBP15.44■□□□□ 0.06
LCLAT1-211ENST00000491680 CABLES1Q8TDN4 633 aa15.42■□□□□ 0.06
LCLAT1-211ENST00000491680 CABP1Q9NZU7 370 aa15.42■□□□□ 0.06
LCLAT1-211ENST00000491680 RBM19Q9Y4C8 960 aaKnown RBP15.41■□□□□ 0.06
LCLAT1-211ENST00000491680 ATAD2Q6PL18 1390 aa15.41■□□□□ 0.06
LCLAT1-211ENST00000491680 PPP4R2Q9NY27 417 aa15.4■□□□□ 0.06
LCLAT1-211ENST00000491680 USP21Q9UK80 565 aa15.39■□□□□ 0.05
LCLAT1-211ENST00000491680 KTN1Q86UP2 1357 aaKnown RBP15.39■□□□□ 0.05
LCLAT1-211ENST00000491680 MRS2Q9HD23 443 aa15.39■□□□□ 0.05
LCLAT1-211ENST00000491680 AKAP12Q02952 1782 aa15.39■□□□□ 0.05
LCLAT1-211ENST00000491680 CRYBG1Q9Y4K1 1723 aa15.38■□□□□ 0.05
LCLAT1-211ENST00000491680 RXRBP28702 533 aa15.38■□□□□ 0.05
LCLAT1-211ENST00000491680 CARD14Q9BXL6 1004 aa15.38■□□□□ 0.05
LCLAT1-211ENST00000491680 SLC12A5Q9H2X9 1139 aa15.38■□□□□ 0.05
LCLAT1-211ENST00000491680 QTRT2Q9H974 415 aaKnown RBP15.38■□□□□ 0.05
LCLAT1-211ENST00000491680 PHRF1Q9P1Y6 1649 aaKnown RBP15.37■□□□□ 0.05
LCLAT1-211ENST00000491680 NUTM2GQ5VZR2 741 aa15.37■□□□□ 0.05
LCLAT1-211ENST00000491680 PLCH1Q4KWH8 1693 aa15.37■□□□□ 0.05
LCLAT1-211ENST00000491680 PARD3Q8TEW0 1356 aa15.37■□□□□ 0.05
LCLAT1-211ENST00000491680 CCDC184Q52MB2 194 aa15.36■□□□□ 0.05
LCLAT1-211ENST00000491680 AMER1Q5JTC6 1135 aaPredicted RBP15.36■□□□□ 0.05
LCLAT1-211ENST00000491680 FNBP4Q8N3X1 1017 aaPredicted RBP15.36■□□□□ 0.05
LCLAT1-211ENST00000491680 ABTB2Q8N961 1025 aa15.36■□□□□ 0.05
LCLAT1-211ENST00000491680 USP6P35125 1406 aa15.36■□□□□ 0.05
LCLAT1-211ENST00000491680 BRD4O60885 1362 aaPredicted RBP15.36■□□□□ 0.05
LCLAT1-211ENST00000491680 MAPK8IP2Q13387 824 aaPredicted RBP15.35■□□□□ 0.05
LCLAT1-211ENST00000491680 TMC1Q8TDI8 760 aa15.35■□□□□ 0.05
LCLAT1-211ENST00000491680 UPF1Q92900 1129 aaKnown RBP eCLIP15.35■□□□□ 0.054e-6■■■■□ 21.7
LCLAT1-211ENST00000491680 TRPC5Q9UL62 973 aaPredicted RBP15.35■□□□□ 0.05
LCLAT1-211ENST00000491680 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.35■□□□□ 0.05
LCLAT1-211ENST00000491680 FANCIQ9NVI1 1328 aa15.35■□□□□ 0.05
LCLAT1-211ENST00000491680 ZNF692Q9BU19 519 aaPredicted RBP15.35■□□□□ 0.05
LCLAT1-211ENST00000491680 NPC1L1Q9UHC9 1359 aa15.34■□□□□ 0.05
LCLAT1-211ENST00000491680 NINLQ9Y2I6 1382 aa15.34■□□□□ 0.05
LCLAT1-211ENST00000491680 CNGB1Q14028 1251 aaPredicted RBP15.34■□□□□ 0.05
LCLAT1-211ENST00000491680 RALBP1Q15311 655 aa15.34■□□□□ 0.05
LCLAT1-211ENST00000491680 NWD2Q9ULI1 1742 aa15.34■□□□□ 0.05
LCLAT1-211ENST00000491680 MON2Q7Z3U7 1717 aa15.33■□□□□ 0.05
LCLAT1-211ENST00000491680 RBM6P78332 1123 aaKnown RBP15.33■□□□□ 0.04
LCLAT1-211ENST00000491680 KNSTRNQ9Y448 316 aa15.33■□□□□ 0.04
LCLAT1-211ENST00000491680 SLIT2O94813 1529 aa15.33■□□□□ 0.04
LCLAT1-211ENST00000491680 COL14A1Q05707 1796 aaKnown RBP15.33■□□□□ 0.04
LCLAT1-211ENST00000491680 NLRP13Q86W25 1043 aa15.32■□□□□ 0.04
LCLAT1-211ENST00000491680 ANKRD36BQ8N2N9 1353 aa15.32■□□□□ 0.04
LCLAT1-211ENST00000491680 BCL9LQ86UU0 1499 aa15.32■□□□□ 0.04
LCLAT1-211ENST00000491680 CD163L1Q9NR16 1453 aa15.32■□□□□ 0.04
LCLAT1-211ENST00000491680 ATRNO75882 1429 aa15.32■□□□□ 0.04
LCLAT1-211ENST00000491680 SMG6Q86US8 1419 aaKnown RBP15.32■□□□□ 0.04
LCLAT1-211ENST00000491680 CC2D1BQ5T0F9 858 aaKnown RBP15.32■□□□□ 0.04
LCLAT1-211ENST00000491680 HDGFL2Q7Z4V5 671 aaPredicted RBP15.32■□□□□ 0.04
LCLAT1-211ENST00000491680 UNC5CLQ8IV45 518 aa15.32■□□□□ 0.04
LCLAT1-211ENST00000491680 NRKQ7Z2Y5 1582 aa15.31■□□□□ 0.04
LCLAT1-211ENST00000491680 CDK12Q9NYV4 1490 aaPredicted RBP15.31■□□□□ 0.04
LCLAT1-211ENST00000491680 PIK3C2AO00443 1686 aa15.31■□□□□ 0.04
LCLAT1-211ENST00000491680 CPSF1Q10570 1443 aaKnown RBP15.3■□□□□ 0.04
LCLAT1-211ENST00000491680 NSD3Q9BZ95 1437 aa15.3■□□□□ 0.04
LCLAT1-211ENST00000491680 MYBBP1AQ9BQG0 1328 aaKnown RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms