RNA–Protein interactions for RNA: ENST00000490692.1

PCSK9-202, Transcript of proprotein convertase subtilisin/kexin type 9, humanhuman

TSL 2

Gene PCSK9, Length 3,891 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9-202ENST00000490692 GGT6Q6P531 493 aa14.03□□□□□ -0.16
PCSK9-202ENST00000490692 RILPL2Q969X0 211 aa14.03□□□□□ -0.16
PCSK9-202ENST00000490692 USP25Q9UHP3 1055 aa14.03□□□□□ -0.16
PCSK9-202ENST00000490692 GOLGA6L6A8MZA4 724 aa14.03□□□□□ -0.16
PCSK9-202ENST00000490692 SRPK2P78362 688 aaKnown RBP14.03□□□□□ -0.16
PCSK9-202ENST00000490692 NUTM2DQ5VT03 806 aaPredicted RBP14.03□□□□□ -0.16
PCSK9-202ENST00000490692 ZFP91Q96JP5 570 aaPredicted RBP14.02□□□□□ -0.16
PCSK9-202ENST00000490692 RIPK4P57078 832 aa14.02□□□□□ -0.17
PCSK9-202ENST00000490692 DIAPH3Q9NSV4 1193 aa14.02□□□□□ -0.17
PCSK9-202ENST00000490692 RAB3GAP1Q15042 981 aa14.02□□□□□ -0.17
PCSK9-202ENST00000490692 RSPH4AQ5TD94 716 aa14.02□□□□□ -0.17
PCSK9-202ENST00000490692 ATF7IPQ6VMQ6 1270 aa14.02□□□□□ -0.17
PCSK9-202ENST00000490692 C17orf53Q8N3J3 647 aaPredicted RBP14.02□□□□□ -0.17
PCSK9-202ENST00000490692 STK26Q9P289 416 aa14.02□□□□□ -0.17
PCSK9-202ENST00000490692 CCDC27Q2M243 656 aa14.01□□□□□ -0.17
PCSK9-202ENST00000490692 SLC4A10Q6U841 1118 aa14.01□□□□□ -0.17
PCSK9-202ENST00000490692 SMAP1Q8IYB5 467 aaPredicted RBP14.01□□□□□ -0.17
PCSK9-202ENST00000490692 TTC12Q9H892 705 aaPredicted RBP14.01□□□□□ -0.17
PCSK9-202ENST00000490692 SPAG9O60271 1321 aaKnown RBP14.01□□□□□ -0.17
PCSK9-202ENST00000490692 ITSN2Q9NZM3 1697 aa14.01□□□□□ -0.17
PCSK9-202ENST00000490692 GTF2E1P29083 439 aaPredicted RBP14.01□□□□□ -0.17
PCSK9-202ENST00000490692 PLEKHH2Q8IVE3 1493 aa14□□□□□ -0.17
PCSK9-202ENST00000490692 KCNJ4P48050 445 aa14□□□□□ -0.17
PCSK9-202ENST00000490692 RABEP1Q15276 862 aa14□□□□□ -0.17
PCSK9-202ENST00000490692 KDM5BQ9UGL1 1544 aa14□□□□□ -0.17
PCSK9-202ENST00000490692 TEX14Q8IWB6 1497 aa14□□□□□ -0.17
PCSK9-202ENST00000490692 NGEFQ8N5V2 710 aa14□□□□□ -0.17
PCSK9-202ENST00000490692 CCDC94Q9BW85 323 aaPredicted RBP14□□□□□ -0.17
PCSK9-202ENST00000490692 ANO2Q9NQ90 1003 aa14□□□□□ -0.17
PCSK9-202ENST00000490692 KIF3BO15066 747 aa14□□□□□ -0.17
PCSK9-202ENST00000490692 MBD3O95983 291 aa14□□□□□ -0.17
PCSK9-202ENST00000490692 MLECQ14165 292 aa14□□□□□ -0.17
PCSK9-202ENST00000490692 SSH1Q8WYL5 1049 aa14□□□□□ -0.17
PCSK9-202ENST00000490692 CHAMP1Q96JM3 812 aa14□□□□□ -0.17
PCSK9-202ENST00000490692 FIBPO43427 364 aa13.99□□□□□ -0.17
PCSK9-202ENST00000490692 TRIM27P14373 513 aa13.99□□□□□ -0.17
PCSK9-202ENST00000490692 TBC1D9Q6ZT07 1266 aa13.99□□□□□ -0.17
PCSK9-202ENST00000490692 ZRSR1Q15695 479 aaKnown RBP13.98□□□□□ -0.17
PCSK9-202ENST00000490692 ERCC6L2Q5T890 1561 aa13.98□□□□□ -0.17
PCSK9-202ENST00000490692 INTS3Q68E01 1043 aaKnown RBP13.98□□□□□ -0.17
PCSK9-202ENST00000490692 ABCA8O94911 1581 aa13.98□□□□□ -0.17
PCSK9-202ENST00000490692 CCDC141Q6ZP82 1450 aa13.98□□□□□ -0.17
PCSK9-202ENST00000490692 NOL7Q9UMY1 257 aaKnown RBP13.98□□□□□ -0.17
PCSK9-202ENST00000490692 REC8O95072 547 aa13.97□□□□□ -0.17
PCSK9-202ENST00000490692 JARID2Q92833 1246 aaPredicted RBP13.97□□□□□ -0.17
PCSK9-202ENST00000490692 STAC3Q96MF2 364 aa13.97□□□□□ -0.17
PCSK9-202ENST00000490692 CFAP44Q96MT7 982 aa13.97□□□□□ -0.17
PCSK9-202ENST00000490692 SLC12A5Q9H2X9 1139 aa13.97□□□□□ -0.17
PCSK9-202ENST00000490692 ABCC10Q5T3U5 1492 aa13.97□□□□□ -0.17
PCSK9-202ENST00000490692 NINLQ9Y2I6 1382 aa13.97□□□□□ -0.17
PCSK9-202ENST00000490692 AEBP1Q8IUX7 1158 aa13.97□□□□□ -0.17
PCSK9-202ENST00000490692 SMC5Q8IY18 1101 aa13.97□□□□□ -0.17
PCSK9-202ENST00000490692 SYCP2Q9BX26 1530 aa13.96□□□□□ -0.17
PCSK9-202ENST00000490692 CFAP70Q5T0N1 1121 aa13.96□□□□□ -0.17
PCSK9-202ENST00000490692 SOX12O15370 315 aa13.96□□□□□ -0.18
PCSK9-202ENST00000490692 ZGPATQ8N5A5 531 aaKnown RBP13.95□□□□□ -0.18
PCSK9-202ENST00000490692 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.95□□□□□ -0.18
PCSK9-202ENST00000490692 CHD1O14646 1710 aa13.95□□□□□ -0.18
PCSK9-202ENST00000490692 VPS37CA5D8V6 355 aaPredicted RBP13.94□□□□□ -0.18
PCSK9-202ENST00000490692 APPP05067 770 aa13.94□□□□□ -0.18
PCSK9-202ENST00000490692 FBXW7Q969H0 707 aa13.94□□□□□ -0.18
PCSK9-202ENST00000490692 TESK2Q96S53 571 aa13.94□□□□□ -0.18
PCSK9-202ENST00000490692 NOLC1Q14978 699 aaKnown RBP eCLIP13.94□□□□□ -0.181e-6■□□□□ 9.6
PCSK9-202ENST00000490692 GGNBP2Q9H3C7 697 aa13.94□□□□□ -0.18
PCSK9-202ENST00000490692 C14orf37Q86TY3 774 aa13.93□□□□□ -0.18
PCSK9-202ENST00000490692 CD2BP2O95400 341 aaKnown RBP13.93□□□□□ -0.18
PCSK9-202ENST00000490692 TPD52L1Q16890 204 aaPredicted RBP13.93□□□□□ -0.18
PCSK9-202ENST00000490692 CDC42BPAQ5VT25 1732 aa13.93□□□□□ -0.18
PCSK9-202ENST00000490692 WDR63Q8IWG1 891 aa13.93□□□□□ -0.18
PCSK9-202ENST00000490692 LRSAM1Q6UWE0 723 aa13.92□□□□□ -0.18
PCSK9-202ENST00000490692 PPP1R9BQ96SB3 815 aa13.92□□□□□ -0.18
PCSK9-202ENST00000490692 UPF3BQ9BZI7 483 aaKnown RBP13.92□□□□□ -0.18
PCSK9-202ENST00000490692 ADCY5O95622 1261 aa13.92□□□□□ -0.18
PCSK9-202ENST00000490692 HCLS1P14317 486 aaPredicted RBP13.92□□□□□ -0.18
PCSK9-202ENST00000490692 U2AF2P26368 475 aaKnown RBP eCLIP13.92□□□□□ -0.18
PCSK9-202ENST00000490692 SNX21Q969T3 373 aa13.92□□□□□ -0.18
PCSK9-202ENST00000490692 OS9Q13438 667 aaPredicted RBP13.92□□□□□ -0.18
PCSK9-202ENST00000490692 PKP1Q13835 747 aa13.92□□□□□ -0.18
PCSK9-202ENST00000490692 C16orf45Q96MC5 204 aaPredicted RBP13.92□□□□□ -0.18
PCSK9-202ENST00000490692 ADGRL2O95490 1459 aa13.92□□□□□ -0.18
PCSK9-202ENST00000490692 CCDC66A2RUB6 948 aa13.91□□□□□ -0.18
PCSK9-202ENST00000490692 HMOX1P09601 288 aa13.91□□□□□ -0.18
PCSK9-202ENST00000490692 CWC22Q9HCG8 908 aaKnown RBP13.91□□□□□ -0.18
PCSK9-202ENST00000490692 TRIM5Q9C035 493 aa13.91□□□□□ -0.18
PCSK9-202ENST00000490692 RALGAPBQ86X10 1494 aa13.91□□□□□ -0.18
PCSK9-202ENST00000490692 MCM5P33992 734 aa13.91□□□□□ -0.18
PCSK9-202ENST00000490692 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.91□□□□□ -0.18
PCSK9-202ENST00000490692 PRDM4Q9UKN5 801 aa13.91□□□□□ -0.18
PCSK9-202ENST00000490692 ZMYM4Q5VZL5 1548 aa13.9□□□□□ -0.18
PCSK9-202ENST00000490692 MBD5Q9P267 1494 aa13.9□□□□□ -0.18
PCSK9-202ENST00000490692 SMARCA5O60264 1052 aaPredicted RBP13.9□□□□□ -0.18
PCSK9-202ENST00000490692 RAPGEF3O95398 923 aa13.9□□□□□ -0.18
PCSK9-202ENST00000490692 LARP6Q9BRS8 491 aaKnown RBP13.9□□□□□ -0.18
PCSK9-202ENST00000490692 THUMPD2Q9BTF0 503 aaKnown RBP13.9□□□□□ -0.18
PCSK9-202ENST00000490692 TRHP20396 242 aaPredicted RBP13.9□□□□□ -0.19
PCSK9-202ENST00000490692 GCC1Q96CN9 775 aa13.9□□□□□ -0.19
PCSK9-202ENST00000490692 TMEM132EQ6IEE7 984 aa13.89□□□□□ -0.19
PCSK9-202ENST00000490692 CCDC112Q8NEF3 446 aa13.89□□□□□ -0.19
PCSK9-202ENST00000490692 BMP2KLQ5H9B9 411 aa13.89□□□□□ -0.19
PCSK9-202ENST00000490692 BLMP54132 1417 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms