RNA–Protein interactions for RNA: ENST00000489907.2

SMG5-205, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG5, Length 535 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-205ENST00000489907 SPATA31A7Q8IWB4 1347 aa12.04□□□□□ -0.48
SMG5-205ENST00000489907 TNS1Q9HBL0 1735 aaKnown RBP12.03□□□□□ -0.48
SMG5-205ENST00000489907 STAC3Q96MF2 364 aa12.03□□□□□ -0.48
SMG5-205ENST00000489907 KDM2AQ9Y2K7 1162 aa12.03□□□□□ -0.48
SMG5-205ENST00000489907 CCDC9Q9Y3X0 531 aaKnown RBP12.03□□□□□ -0.48
SMG5-205ENST00000489907 PHRF1Q9P1Y6 1649 aaKnown RBP12.03□□□□□ -0.48
SMG5-205ENST00000489907 ITSN1Q15811 1721 aa12.03□□□□□ -0.48
SMG5-205ENST00000489907 ATP7BP35670 1465 aa12.02□□□□□ -0.48
SMG5-205ENST00000489907 RGPD1P0DJD0 1748 aa12.02□□□□□ -0.49
SMG5-205ENST00000489907 GPRASP1Q5JY77 1395 aa12.02□□□□□ -0.49
SMG5-205ENST00000489907 TOPAZ1Q8N9V7 1692 aa12.01□□□□□ -0.49
SMG5-205ENST00000489907 HRCP23327 699 aa12.01□□□□□ -0.49
SMG5-205ENST00000489907 FAM182BQ5T319 152 aa12.01□□□□□ -0.49
SMG5-205ENST00000489907 NUDT16Q96DE0 195 aaKnown RBP12□□□□□ -0.49
SMG5-205ENST00000489907 EIF3AQ14152 1382 aaKnown RBP12□□□□□ -0.49
SMG5-205ENST00000489907 EN1Q05925 392 aaPredicted RBP11.99□□□□□ -0.49
SMG5-205ENST00000489907 SF3B2Q13435 895 aaKnown RBP11.99□□□□□ -0.49
SMG5-205ENST00000489907 NGDNQ8NEJ9 315 aaKnown RBP11.99□□□□□ -0.49
SMG5-205ENST00000489907 POLR3AO14802 1390 aaPredicted RBP11.99□□□□□ -0.49
SMG5-205ENST00000489907 DISP2A7MBM2 1401 aa11.99□□□□□ -0.49
SMG5-205ENST00000489907 KIAA1210Q9ULL0 1709 aa11.99□□□□□ -0.49
SMG5-205ENST00000489907 KIAA0232Q92628 1395 aa11.98□□□□□ -0.49
SMG5-205ENST00000489907 SPATA31A1Q5TZJ5 1347 aa11.98□□□□□ -0.49
SMG5-205ENST00000489907 BAG6P46379 1132 aa11.98□□□□□ -0.49
SMG5-205ENST00000489907 LMO7Q8WWI1 1683 aa11.97□□□□□ -0.49
SMG5-205ENST00000489907 PLEKHG3A1L390 1219 aa11.97□□□□□ -0.49
SMG5-205ENST00000489907 PSDA5PKW4 1024 aaPredicted RBP11.97□□□□□ -0.49
SMG5-205ENST00000489907 CDK19Q9BWU1 502 aa11.97□□□□□ -0.49
SMG5-205ENST00000489907 CAMTA1Q9Y6Y1 1673 aa11.97□□□□□ -0.49
SMG5-205ENST00000489907 ACEP12821 1306 aa11.96□□□□□ -0.49
SMG5-205ENST00000489907 PAK3O75914 559 aaPredicted RBP11.96□□□□□ -0.49
SMG5-205ENST00000489907 CHRNA2Q15822 529 aa11.96□□□□□ -0.49
SMG5-205ENST00000489907 NBPF8Q3BBV2 869 aa11.96□□□□□ -0.49
SMG5-205ENST00000489907 CAMKK2Q96RR4 588 aa11.96□□□□□ -0.49
SMG5-205ENST00000489907 PRDM11Q9NQV5 511 aa11.96□□□□□ -0.49
SMG5-205ENST00000489907 NRKQ7Z2Y5 1582 aa11.96□□□□□ -0.5
SMG5-205ENST00000489907 EZH2Q15910 746 aaKnown RBP11.95□□□□□ -0.5
SMG5-205ENST00000489907 NBPF1Q3BBV0 1214 aa11.95□□□□□ -0.5
SMG5-205ENST00000489907 CCDC61Q9Y6R9 512 aa11.95□□□□□ -0.5
SMG5-205ENST00000489907 ZC3H6P61129 1189 aaKnown RBP11.94□□□□□ -0.5
SMG5-205ENST00000489907 RREB1Q92766 1687 aa11.94□□□□□ -0.5
SMG5-205ENST00000489907 USP19O94966 1318 aa11.93□□□□□ -0.5
SMG5-205ENST00000489907 A0A0G2JS52 829 aa11.93□□□□□ -0.5
SMG5-205ENST00000489907 MYT1Q01538 1121 aa11.93□□□□□ -0.5
SMG5-205ENST00000489907 NUTM2GQ5VZR2 741 aa11.93□□□□□ -0.5
SMG5-205ENST00000489907 BARGINQ6ZT62 677 aa11.93□□□□□ -0.5
SMG5-205ENST00000489907 SSH2Q76I76 1423 aa11.93□□□□□ -0.5
SMG5-205ENST00000489907 R3HDM1Q15032 1099 aaKnown RBP11.92□□□□□ -0.5
SMG5-205ENST00000489907 CPDO75976 1380 aa11.92□□□□□ -0.5
SMG5-205ENST00000489907 NUP188Q5SRE5 1749 aa11.91□□□□□ -0.5
SMG5-205ENST00000489907 TRIM37O94972 964 aa11.91□□□□□ -0.5
SMG5-205ENST00000489907 LARP1Q6PKG0 1096 aaKnown RBP11.91□□□□□ -0.5
SMG5-205ENST00000489907 FAM196AQ6ZSG2 479 aa11.91□□□□□ -0.5
SMG5-205ENST00000489907 STRN4Q9NRL3 753 aa11.91□□□□□ -0.5
SMG5-205ENST00000489907 COL18A1P39060 1754 aa11.91□□□□□ -0.5
SMG5-205ENST00000489907 PARP4Q9UKK3 1724 aaKnown RBP11.91□□□□□ -0.5
SMG5-205ENST00000489907 PEAK1Q9H792 1746 aa11.9□□□□□ -0.5
SMG5-205ENST00000489907 SBF2Q86WG5 1849 aa11.9□□□□□ -0.5
SMG5-205ENST00000489907 GCP02774 474 aa11.89□□□□□ -0.51
SMG5-205ENST00000489907 ABTB2Q8N961 1025 aa11.89□□□□□ -0.51
SMG5-205ENST00000489907 PPIP5K1Q6PFW1 1433 aa11.88□□□□□ -0.51
SMG5-205ENST00000489907 USP35Q9P2H5 1018 aa11.88□□□□□ -0.51
SMG5-205ENST00000489907 PARD3Q8TEW0 1356 aa11.88□□□□□ -0.51
SMG5-205ENST00000489907 COL5A2P05997 1499 aaPredicted RBP11.88□□□□□ -0.51
SMG5-205ENST00000489907 QRICH2Q9H0J4 1663 aa11.87□□□□□ -0.51
SMG5-205ENST00000489907 SLIT3O75094 1523 aa11.87□□□□□ -0.51
SMG5-205ENST00000489907 APBA3O96018 575 aa11.87□□□□□ -0.51
SMG5-205ENST00000489907 TCP11L2Q8N4U5 519 aa11.87□□□□□ -0.51
SMG5-205ENST00000489907 CABP2Q9NPB3 220 aa11.87□□□□□ -0.51
SMG5-205ENST00000489907 EVA1CP58658 441 aa11.86□□□□□ -0.51
SMG5-205ENST00000489907 NLRP13Q86W25 1043 aa11.86□□□□□ -0.51
SMG5-205ENST00000489907 THRAP3Q9Y2W1 955 aaKnown RBP11.86□□□□□ -0.51
SMG5-205ENST00000489907 BRD4O60885 1362 aaPredicted RBP11.86□□□□□ -0.51
SMG5-205ENST00000489907 PIK3C2AO00443 1686 aa11.86□□□□□ -0.51
SMG5-205ENST00000489907 RGPD5Q99666 1765 aa11.86□□□□□ -0.51
SMG5-205ENST00000489907 CABP1Q9NZU7 370 aa11.85□□□□□ -0.51
SMG5-205ENST00000489907 USP6P35125 1406 aa11.85□□□□□ -0.51
SMG5-205ENST00000489907 CENPJQ9HC77 1338 aaPredicted RBP11.85□□□□□ -0.51
SMG5-205ENST00000489907 WNK3Q9BYP7 1800 aa11.84□□□□□ -0.51
SMG5-205ENST00000489907 AATKQ6ZMQ8 1374 aa11.84□□□□□ -0.51
SMG5-205ENST00000489907 PDE3BQ13370 1112 aa11.84□□□□□ -0.51
SMG5-205ENST00000489907 AXIN2Q9Y2T1 843 aa11.84□□□□□ -0.51
SMG5-205ENST00000489907 LRRC37A3O60309 1634 aa11.84□□□□□ -0.51
SMG5-205ENST00000489907 RGPD3A6NKT7 1758 aaPredicted RBP11.84□□□□□ -0.51
SMG5-205ENST00000489907 AKAP12Q02952 1782 aa11.84□□□□□ -0.51
SMG5-205ENST00000489907 RGPD4Q7Z3J3 1758 aa11.84□□□□□ -0.51
SMG5-205ENST00000489907 CRB1P82279 1406 aa11.84□□□□□ -0.51
SMG5-205ENST00000489907 TRPM1Q7Z4N2 1603 aa11.83□□□□□ -0.52
SMG5-205ENST00000489907 SRPK2P78362 688 aaKnown RBP11.83□□□□□ -0.52
SMG5-205ENST00000489907 PTF1AQ7RTS3 328 aa11.82□□□□□ -0.52
SMG5-205ENST00000489907 L3MBTL2Q969R5 705 aa11.82□□□□□ -0.52
SMG5-205ENST00000489907 PLSCR1O15162 318 aa11.81□□□□□ -0.52
SMG5-205ENST00000489907 NLRP6P59044 892 aa11.81□□□□□ -0.52
SMG5-205ENST00000489907 PROM2Q8N271 834 aa11.81□□□□□ -0.52
SMG5-205ENST00000489907 CASZ1Q86V15 1759 aa11.8□□□□□ -0.52
SMG5-205ENST00000489907 ARHGEF25Q86VW2 580 aa11.8□□□□□ -0.52
SMG5-205ENST00000489907 BCL9O00512 1426 aa11.79□□□□□ -0.52
SMG5-205ENST00000489907 CPSF1Q10570 1443 aaKnown RBP11.79□□□□□ -0.52
SMG5-205ENST00000489907 MARCH10Q8NA82 808 aaPredicted RBP11.79□□□□□ -0.52
SMG5-205ENST00000489907 OVOS2A0A0G2JMS6 1433 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms