RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 NGLY1Q96IV0 654 aa17.29■□□□□ 0.36
NELFE-209ENST00000488426 SPATA31A3Q5VYP0 1347 aa17.29■□□□□ 0.36
NELFE-209ENST00000488426 NPC1L1Q9UHC9 1359 aa17.28■□□□□ 0.36
NELFE-209ENST00000488426 KNSTRNQ9Y448 316 aa17.28■□□□□ 0.36
NELFE-209ENST00000488426 NINLQ9Y2I6 1382 aa17.28■□□□□ 0.36
NELFE-209ENST00000488426 MYBBP1AQ9BQG0 1328 aaKnown RBP17.27■□□□□ 0.36
NELFE-209ENST00000488426 CABLES1Q8TDN4 633 aa17.27■□□□□ 0.36
NELFE-209ENST00000488426 MRS2Q9HD23 443 aa17.27■□□□□ 0.36
NELFE-209ENST00000488426 QTRT2Q9H974 415 aaKnown RBP17.27■□□□□ 0.35
NELFE-209ENST00000488426 ADGRB2O60241 1585 aa17.26■□□□□ 0.35
NELFE-209ENST00000488426 PSME1Q06323 249 aa17.26■□□□□ 0.35
NELFE-209ENST00000488426 ATAD2Q6PL18 1390 aa17.25■□□□□ 0.35
NELFE-209ENST00000488426 CDK19Q9BWU1 502 aa17.25■□□□□ 0.35
NELFE-209ENST00000488426 COL22A1Q8NFW1 1626 aaPredicted RBP17.25■□□□□ 0.35
NELFE-209ENST00000488426 BRD4O60885 1362 aaPredicted RBP17.25■□□□□ 0.35
NELFE-209ENST00000488426 RXRBP28702 533 aa17.24■□□□□ 0.35
NELFE-209ENST00000488426 CCDC184Q52MB2 194 aa17.24■□□□□ 0.35
NELFE-209ENST00000488426 NUDT16Q96DE0 195 aaKnown RBP17.24■□□□□ 0.35
NELFE-209ENST00000488426 ANKARQ7Z5J8 1434 aa17.24■□□□□ 0.35
NELFE-209ENST00000488426 KIF1AQ12756 1690 aa17.24■□□□□ 0.35
NELFE-209ENST00000488426 AMER1Q5JTC6 1135 aaPredicted RBP17.23■□□□□ 0.35
NELFE-209ENST00000488426 LMOD2Q6P5Q4 547 aa17.23■□□□□ 0.35
NELFE-209ENST00000488426 FNBP4Q8N3X1 1017 aaPredicted RBP17.23■□□□□ 0.35
NELFE-209ENST00000488426 CNGB1Q14028 1251 aaPredicted RBP17.22■□□□□ 0.35
NELFE-209ENST00000488426 USP21Q9UK80 565 aa17.22■□□□□ 0.35
NELFE-209ENST00000488426 ANKRD36BQ8N2N9 1353 aa17.21■□□□□ 0.35
NELFE-209ENST00000488426 SRPK2P78362 688 aaKnown RBP17.21■□□□□ 0.35
NELFE-209ENST00000488426 CC2D1BQ5T0F9 858 aaKnown RBP17.21■□□□□ 0.35
NELFE-209ENST00000488426 NLRP13Q86W25 1043 aa17.21■□□□□ 0.35
NELFE-209ENST00000488426 TMC1Q8TDI8 760 aa17.2■□□□□ 0.34
NELFE-209ENST00000488426 CABP2Q9NPB3 220 aa17.2■□□□□ 0.34
NELFE-209ENST00000488426 TNS3Q68CZ2 1445 aa17.2■□□□□ 0.34
NELFE-209ENST00000488426 SLC12A5Q9H2X9 1139 aa17.2■□□□□ 0.34
NELFE-209ENST00000488426 ATP7BP35670 1465 aa17.19■□□□□ 0.34
NELFE-209ENST00000488426 NGDNQ8NEJ9 315 aaKnown RBP17.19■□□□□ 0.34
NELFE-209ENST00000488426 CARD14Q9BXL6 1004 aa17.19■□□□□ 0.34
NELFE-209ENST00000488426 SBNO1A3KN83 1393 aa17.19■□□□□ 0.34
NELFE-209ENST00000488426 BCL9LQ86UU0 1499 aa17.19■□□□□ 0.34
NELFE-209ENST00000488426 NSD3Q9BZ95 1437 aa17.18■□□□□ 0.34
NELFE-209ENST00000488426 RBM6P78332 1123 aaKnown RBP17.18■□□□□ 0.34
NELFE-209ENST00000488426 TRPM3Q9HCF6 1732 aaPredicted RBP17.16■□□□□ 0.34
NELFE-209ENST00000488426 RGS12O14924 1447 aa17.15■□□□□ 0.34
NELFE-209ENST00000488426 PAK3O75914 559 aaPredicted RBP17.15■□□□□ 0.34
NELFE-209ENST00000488426 CCDC61Q9Y6R9 512 aa17.15■□□□□ 0.34
NELFE-209ENST00000488426 ACEP12821 1306 aa17.14■□□□□ 0.33
NELFE-209ENST00000488426 FAM9BQ8IZU0 186 aa17.14■□□□□ 0.33
NELFE-209ENST00000488426 TRPC5Q9UL62 973 aaPredicted RBP17.14■□□□□ 0.33
NELFE-209ENST00000488426 MARF1Q9Y4F3 1742 aaKnown RBP17.14■□□□□ 0.33
NELFE-209ENST00000488426 NSD2O96028 1365 aa17.14■□□□□ 0.33
NELFE-209ENST00000488426 FAM83GA6ND36 823 aa17.14■□□□□ 0.33
NELFE-209ENST00000488426 NUTM2GQ5VZR2 741 aa17.14■□□□□ 0.33
NELFE-209ENST00000488426 PNISRQ8TF01 805 aaKnown RBP17.14■□□□□ 0.33
NELFE-209ENST00000488426 TERF2IPQ9NYB0 399 aa17.14■□□□□ 0.33
NELFE-209ENST00000488426 EP400Q96L91 3159 aa17.14■□□□□ 0.33
NELFE-209ENST00000488426 ATRNO75882 1429 aa17.13■□□□□ 0.33
NELFE-209ENST00000488426 HAP1P54257 671 aaPredicted RBP17.13■□□□□ 0.33
NELFE-209ENST00000488426 UPF1Q92900 1129 aaKnown RBP eCLIP17.13■□□□□ 0.33
NELFE-209ENST00000488426 CD163L1Q9NR16 1453 aa17.13■□□□□ 0.33
NELFE-209ENST00000488426 A0A1W2PP64 1363 aa17.13■□□□□ 0.33
NELFE-209ENST00000488426 CGNL1Q0VF96 1302 aa17.12■□□□□ 0.33
NELFE-209ENST00000488426 PLEKHG3A1L390 1219 aa17.12■□□□□ 0.33
NELFE-209ENST00000488426 ARHGEF10O15013 1369 aa17.12■□□□□ 0.33
NELFE-209ENST00000488426 SLIT2O94813 1529 aa17.12■□□□□ 0.33
NELFE-209ENST00000488426 ALS2Q96Q42 1657 aa17.11■□□□□ 0.33
NELFE-209ENST00000488426 PPP2R1AP30153 589 aa17.11■□□□□ 0.33
NELFE-209ENST00000488426 HNRNPUQ00839 825 aaKnown RBP eCLIP17.11■□□□□ 0.33
NELFE-209ENST00000488426 UNC5CLQ8IV45 518 aa17.11■□□□□ 0.33
NELFE-209ENST00000488426 CDK12Q9NYV4 1490 aaPredicted RBP17.1■□□□□ 0.33
NELFE-209ENST00000488426 GJD4Q96KN9 370 aaPredicted RBP17.1■□□□□ 0.33
NELFE-209ENST00000488426 CABP1Q9NZU7 370 aa17.1■□□□□ 0.33
NELFE-209ENST00000488426 POLR3AO14802 1390 aaPredicted RBP17.1■□□□□ 0.33
NELFE-209ENST00000488426 HDGFL2Q7Z4V5 671 aaPredicted RBP17.1■□□□□ 0.33
NELFE-209ENST00000488426 ABCA3Q99758 1704 aa17.09■□□□□ 0.33
NELFE-209ENST00000488426 ANKRD26Q9UPS8 1709 aa17.09■□□□□ 0.33
NELFE-209ENST00000488426 INSRP06213 1382 aa17.09■□□□□ 0.33
NELFE-209ENST00000488426 TOPAZ1Q8N9V7 1692 aa17.09■□□□□ 0.33
NELFE-209ENST00000488426 PPIP5K1Q6PFW1 1433 aa17.08■□□□□ 0.32
NELFE-209ENST00000488426 ITSN1Q15811 1721 aa17.07■□□□□ 0.32
NELFE-209ENST00000488426 KIF20BQ96Q89 1820 aa17.07■□□□□ 0.32
NELFE-209ENST00000488426 AKAP12Q02952 1782 aa17.06■□□□□ 0.32
NELFE-209ENST00000488426 CPSF1Q10570 1443 aaKnown RBP17.06■□□□□ 0.32
NELFE-209ENST00000488426 MON2Q7Z3U7 1717 aa17.06■□□□□ 0.32
NELFE-209ENST00000488426 BTG4Q9NY30 223 aa17.05■□□□□ 0.32
NELFE-209ENST00000488426 GLI3P10071 1580 aa17.05■□□□□ 0.32
NELFE-209ENST00000488426 MORC1Q86VD1 984 aa17.05■□□□□ 0.32
NELFE-209ENST00000488426 ZC3H6P61129 1189 aaKnown RBP17.04■□□□□ 0.32
NELFE-209ENST00000488426 CHRNA2Q15822 529 aa17.04■□□□□ 0.32
NELFE-209ENST00000488426 ABTB2Q8N961 1025 aa17.04■□□□□ 0.32
NELFE-209ENST00000488426 ZBED9Q6R2W3 1325 aa17.04■□□□□ 0.32
NELFE-209ENST00000488426 CRYBG1Q9Y4K1 1723 aa17.04■□□□□ 0.32
NELFE-209ENST00000488426 PLCH1Q4KWH8 1693 aa17.03■□□□□ 0.32
NELFE-209ENST00000488426 VPS72Q15906 364 aa17.03■□□□□ 0.32
NELFE-209ENST00000488426 EDC4Q6P2E9 1401 aaKnown RBP17.02■□□□□ 0.32
NELFE-209ENST00000488426 CCDC9Q9Y3X0 531 aaKnown RBP17.01■□□□□ 0.31
NELFE-209ENST00000488426 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.01■□□□□ 0.31
NELFE-209ENST00000488426 KIAA0232Q92628 1395 aa17.01■□□□□ 0.31
NELFE-209ENST00000488426 PRDM11Q9NQV5 511 aa17■□□□□ 0.31
NELFE-209ENST00000488426 BLMP54132 1417 aaPredicted RBP17■□□□□ 0.31
NELFE-209ENST00000488426 ZNF692Q9BU19 519 aaPredicted RBP16.99■□□□□ 0.31
NELFE-209ENST00000488426 FYB1O15117 783 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms