RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 ORAI2Q96SN7 254 aa15.03■□□□□ -0
HDLBP-242ENST00000488013 FMN2Q9NZ56 1722 aa15.03■□□□□ -0
HDLBP-242ENST00000488013 NSD3Q9BZ95 1437 aa15.02■□□□□ -0
HDLBP-242ENST00000488013 SOCS7O14512 581 aa15.02■□□□□ -0
HDLBP-242ENST00000488013 CD163L1Q9NR16 1453 aa15.01□□□□□ -0.01
HDLBP-242ENST00000488013 USP6P35125 1406 aa15.01□□□□□ -0.01
HDLBP-242ENST00000488013 FOXO3O43524 673 aa15.01□□□□□ -0.01
HDLBP-242ENST00000488013 BRINP3Q76B58 766 aa15.01□□□□□ -0.01
HDLBP-242ENST00000488013 TTC21BQ7Z4L5 1316 aa15□□□□□ -0.01
HDLBP-242ENST00000488013 UBAP1LF5GYI3 381 aa14.99□□□□□ -0.01
HDLBP-242ENST00000488013 KRT28Q7Z3Y7 464 aa14.99□□□□□ -0.01
HDLBP-242ENST00000488013 FYB1O15117 783 aa14.98□□□□□ -0.01
HDLBP-242ENST00000488013 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.98□□□□□ -0.01
HDLBP-242ENST00000488013 PRKRIP1Q9H875 184 aaPredicted RBP14.98□□□□□ -0.01
HDLBP-242ENST00000488013 SSH2Q76I76 1423 aa14.98□□□□□ -0.01
HDLBP-242ENST00000488013 SBNO1A3KN83 1393 aa14.98□□□□□ -0.01
HDLBP-242ENST00000488013 USP32Q8NFA0 1604 aa14.97□□□□□ -0.01
HDLBP-242ENST00000488013 CC2D1BQ5T0F9 858 aaKnown RBP14.97□□□□□ -0.01
HDLBP-242ENST00000488013 MORC1Q86VD1 984 aa14.97□□□□□ -0.01
HDLBP-242ENST00000488013 COG3Q96JB2 828 aa14.97□□□□□ -0.01
HDLBP-242ENST00000488013 ITSN1Q15811 1721 aa14.97□□□□□ -0.01
HDLBP-242ENST00000488013 PAK3O75914 559 aaPredicted RBP14.96□□□□□ -0.01
HDLBP-242ENST00000488013 KIF1AQ12756 1690 aa14.96□□□□□ -0.01
HDLBP-242ENST00000488013 TOPAZ1Q8N9V7 1692 aa14.96□□□□□ -0.01
HDLBP-242ENST00000488013 SOS2Q07890 1332 aaPredicted RBP14.95□□□□□ -0.02
HDLBP-242ENST00000488013 NLRP13Q86W25 1043 aa14.95□□□□□ -0.02
HDLBP-242ENST00000488013 ABTB2Q8N961 1025 aa14.95□□□□□ -0.02
HDLBP-242ENST00000488013 MYOM1P52179 1685 aa14.95□□□□□ -0.02
HDLBP-242ENST00000488013 USP31Q70CQ4 1352 aa14.95□□□□□ -0.02
HDLBP-242ENST00000488013 PARD3Q8TEW0 1356 aa14.95□□□□□ -0.02
HDLBP-242ENST00000488013 ILDR2Q71H61 639 aa14.94□□□□□ -0.02
HDLBP-242ENST00000488013 ARHGEF10O15013 1369 aa14.94□□□□□ -0.02
HDLBP-242ENST00000488013 CCER2I3L3R5 266 aa14.93□□□□□ -0.02
HDLBP-242ENST00000488013 NLRP6P59044 892 aa14.93□□□□□ -0.02
HDLBP-242ENST00000488013 LRRC59Q96AG4 307 aaKnown RBP14.93□□□□□ -0.02
HDLBP-242ENST00000488013 MYBBP1AQ9BQG0 1328 aaKnown RBP14.92□□□□□ -0.02
HDLBP-242ENST00000488013 NME9Q86XW9 330 aa14.92□□□□□ -0.02
HDLBP-242ENST00000488013 KCNH5Q8NCM2 988 aa14.92□□□□□ -0.02
HDLBP-242ENST00000488013 GGNBP2Q9H3C7 697 aa14.92□□□□□ -0.02
HDLBP-242ENST00000488013 U3KPZ7 1027 aaPredicted RBP14.92□□□□□ -0.02
HDLBP-242ENST00000488013 FOXD4L1Q9NU39 408 aa14.91□□□□□ -0.02
HDLBP-242ENST00000488013 XIRP1Q702N8 1843 aaKnown RBP14.91□□□□□ -0.02
HDLBP-242ENST00000488013 SPATA31A3Q5VYP0 1347 aa14.91□□□□□ -0.02
HDLBP-242ENST00000488013 PIP4K2BP78356 416 aa14.9□□□□□ -0.02
HDLBP-242ENST00000488013 AATKQ6ZMQ8 1374 aa14.89□□□□□ -0.03
HDLBP-242ENST00000488013 XPCQ01831 940 aaPredicted RBP14.89□□□□□ -0.03
HDLBP-242ENST00000488013 LMOD2Q6P5Q4 547 aa14.89□□□□□ -0.03
HDLBP-242ENST00000488013 TNS3Q68CZ2 1445 aa14.89□□□□□ -0.03
HDLBP-242ENST00000488013 MIER1Q8N108 512 aa14.88□□□□□ -0.03
HDLBP-242ENST00000488013 PXDNQ92626 1479 aa14.88□□□□□ -0.03
HDLBP-242ENST00000488013 OVOS2A0A0J9YW53 1432 aa14.87□□□□□ -0.03
HDLBP-242ENST00000488013 OVOS2Q6IE36 1432 aa14.87□□□□□ -0.03
HDLBP-242ENST00000488013 PPP2R1AP30153 589 aa14.87□□□□□ -0.03
HDLBP-242ENST00000488013 CNGB1Q14028 1251 aaPredicted RBP14.87□□□□□ -0.03
HDLBP-242ENST00000488013 CFAP53Q96M91 514 aa14.87□□□□□ -0.03
HDLBP-242ENST00000488013 C1QBPQ07021 282 aaKnown RBP14.86□□□□□ -0.03
HDLBP-242ENST00000488013 MON2Q7Z3U7 1717 aa14.86□□□□□ -0.03
HDLBP-242ENST00000488013 KIF24Q5T7B8 1368 aa14.85□□□□□ -0.03
HDLBP-242ENST00000488013 ZBTB22O15209 634 aa14.85□□□□□ -0.03
HDLBP-242ENST00000488013 DDX17Q92841 729 aaKnown RBP14.85□□□□□ -0.03
HDLBP-242ENST00000488013 USP19O94966 1318 aa14.85□□□□□ -0.03
HDLBP-242ENST00000488013 AKAP12Q02952 1782 aa14.85□□□□□ -0.03
HDLBP-242ENST00000488013 AHDC1Q5TGY3 1603 aaPredicted RBP14.84□□□□□ -0.03
HDLBP-242ENST00000488013 GCP02774 474 aa14.84□□□□□ -0.03
HDLBP-242ENST00000488013 TNNT2P45379 298 aaPredicted RBP14.83□□□□□ -0.04
HDLBP-242ENST00000488013 NRKQ7Z2Y5 1582 aa14.82□□□□□ -0.04
HDLBP-242ENST00000488013 MTHFSP49914 203 aa14.82□□□□□ -0.04
HDLBP-242ENST00000488013 NUTM2GQ5VZR2 741 aa14.82□□□□□ -0.04
HDLBP-242ENST00000488013 MRS2Q9HD23 443 aa14.82□□□□□ -0.04
HDLBP-242ENST00000488013 POLKQ9UBT6 870 aa14.82□□□□□ -0.04
HDLBP-242ENST00000488013 ZRANB1Q9UGI0 708 aa14.82□□□□□ -0.04
HDLBP-242ENST00000488013 HAP1P54257 671 aaPredicted RBP14.81□□□□□ -0.04
HDLBP-242ENST00000488013 NUDCQ9Y266 331 aa14.81□□□□□ -0.04
HDLBP-242ENST00000488013 INSRP06213 1382 aa14.81□□□□□ -0.04
HDLBP-242ENST00000488013 ROBO1Q9Y6N7 1651 aa14.81□□□□□ -0.04
HDLBP-242ENST00000488013 RGPD8O14715 1765 aaPredicted RBP14.8□□□□□ -0.04
HDLBP-242ENST00000488013 AMPHP49418 695 aa14.8□□□□□ -0.04
HDLBP-242ENST00000488013 RTL1A6NKG5 1358 aa14.79□□□□□ -0.04
HDLBP-242ENST00000488013 CACNB1Q02641 598 aaPredicted RBP14.79□□□□□ -0.04
HDLBP-242ENST00000488013 NHSL1Q5SYE7 1610 aa14.78□□□□□ -0.04
HDLBP-242ENST00000488013 CPDO75976 1380 aa14.78□□□□□ -0.04
HDLBP-242ENST00000488013 PNPLA6Q8IY17 1366 aa14.78□□□□□ -0.04
HDLBP-242ENST00000488013 JCADQ9P266 1359 aa14.78□□□□□ -0.04
HDLBP-242ENST00000488013 PPM1GO15355 546 aaPredicted RBP14.78□□□□□ -0.04
HDLBP-242ENST00000488013 ARHGEF25Q86VW2 580 aa14.78□□□□□ -0.04
HDLBP-242ENST00000488013 SMG6Q86US8 1419 aaKnown RBP14.77□□□□□ -0.04
HDLBP-242ENST00000488013 FLT4P35916 1363 aa14.77□□□□□ -0.04
HDLBP-242ENST00000488013 MAP3K19Q56UN5 1328 aa14.77□□□□□ -0.04
HDLBP-242ENST00000488013 SOX12O15370 315 aa14.77□□□□□ -0.05
HDLBP-242ENST00000488013 MYCNP04198 464 aaPredicted RBP14.77□□□□□ -0.05
HDLBP-242ENST00000488013 SPATA31A6Q5VVP1 1343 aa14.76□□□□□ -0.05
HDLBP-242ENST00000488013 TRPM3Q9HCF6 1732 aaPredicted RBP14.76□□□□□ -0.05
HDLBP-242ENST00000488013 RRS1Q15050 365 aaKnown RBP14.76□□□□□ -0.05
HDLBP-242ENST00000488013 WDR43Q15061 677 aaKnown RBP eCLIP14.76□□□□□ -0.05
HDLBP-242ENST00000488013 IP6K1Q92551 441 aa14.76□□□□□ -0.05
HDLBP-242ENST00000488013 MED1Q15648 1581 aaPredicted RBP14.76□□□□□ -0.05
HDLBP-242ENST00000488013 SLIT3O75094 1523 aa14.76□□□□□ -0.05
HDLBP-242ENST00000488013 PIK3C2AO00443 1686 aa14.75□□□□□ -0.05
HDLBP-242ENST00000488013 DIAPH1O60610 1272 aaKnown RBP14.75□□□□□ -0.05
HDLBP-242ENST00000488013 PNNQ9H307 717 aaKnown RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms