RNA–Protein interactions for RNA: ENST00000487704.5

RTCB-205, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 767 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-205ENST00000487704 C11orf95C9JLR9 678 aaPredicted RBP12□□□□□ -0.49
RTCB-205ENST00000487704 LMOD2Q6P5Q4 547 aa12□□□□□ -0.49
RTCB-205ENST00000487704 PHF8Q9UPP1 1060 aa12□□□□□ -0.49
RTCB-205ENST00000487704 GPR162Q16538 588 aa11.99□□□□□ -0.49
RTCB-205ENST00000487704 BARGINQ6ZT62 677 aa11.99□□□□□ -0.49
RTCB-205ENST00000487704 MTFR1LQ9H019 292 aa11.98□□□□□ -0.49
RTCB-205ENST00000487704 GOLGB1Q14789 3259 aaKnown RBP11.98□□□□□ -0.49
RTCB-205ENST00000487704 SHANK3Q9BYB0 1731 aa11.97□□□□□ -0.49
RTCB-205ENST00000487704 WAPLQ7Z5K2 1190 aa11.97□□□□□ -0.49
RTCB-205ENST00000487704 PRELPP51888 382 aa11.96□□□□□ -0.49
RTCB-205ENST00000487704 ARXQ96QS3 562 aa11.96□□□□□ -0.49
RTCB-205ENST00000487704 NUP155O75694 1391 aa11.95□□□□□ -0.5
RTCB-205ENST00000487704 PCDH10Q9P2E7 1040 aa11.95□□□□□ -0.5
RTCB-205ENST00000487704 NRXN1Q9ULB1 1477 aa11.95□□□□□ -0.5
RTCB-205ENST00000487704 RGPD3A6NKT7 1758 aaPredicted RBP11.95□□□□□ -0.5
RTCB-205ENST00000487704 RGPD4Q7Z3J3 1758 aa11.95□□□□□ -0.5
RTCB-205ENST00000487704 TECPR2O15040 1411 aa11.94□□□□□ -0.5
RTCB-205ENST00000487704 VPS8Q8N3P4 1428 aa11.94□□□□□ -0.5
RTCB-205ENST00000487704 FMN2Q9NZ56 1722 aa11.94□□□□□ -0.5
RTCB-205ENST00000487704 PROM2Q8N271 834 aa11.94□□□□□ -0.5
RTCB-205ENST00000487704 BCL11BQ9C0K0 894 aaPredicted RBP11.94□□□□□ -0.5
RTCB-205ENST00000487704 RPGRIP1LQ68CZ1 1315 aa11.93□□□□□ -0.5
RTCB-205ENST00000487704 PRDM11Q9NQV5 511 aa11.93□□□□□ -0.5
RTCB-205ENST00000487704 COL13A1Q5TAT6 717 aaPredicted RBP11.92□□□□□ -0.5
RTCB-205ENST00000487704 DNAJC5GQ8N7S2 189 aa11.92□□□□□ -0.5
RTCB-205ENST00000487704 ABCC11Q96J66 1382 aa11.92□□□□□ -0.5
RTCB-205ENST00000487704 CAPN15O75808 1086 aa11.91□□□□□ -0.5
RTCB-205ENST00000487704 SLC15A2Q16348 729 aa11.91□□□□□ -0.5
RTCB-205ENST00000487704 SIRT1Q96EB6 747 aa11.9□□□□□ -0.5
RTCB-205ENST00000487704 GPBP1L1Q9HC44 474 aaPredicted RBP11.9□□□□□ -0.5
RTCB-205ENST00000487704 STRN4Q9NRL3 753 aa11.9□□□□□ -0.5
RTCB-205ENST00000487704 STK32BQ9NY57 414 aa11.9□□□□□ -0.5
RTCB-205ENST00000487704 PLEKHH1Q9ULM0 1364 aa11.9□□□□□ -0.5
RTCB-205ENST00000487704 GRIN3BO60391 1043 aa11.89□□□□□ -0.51
RTCB-205ENST00000487704 APLP1P51693 650 aa11.89□□□□□ -0.51
RTCB-205ENST00000487704 TCP11L2Q8N4U5 519 aa11.89□□□□□ -0.51
RTCB-205ENST00000487704 STK26Q9P289 416 aa11.89□□□□□ -0.51
RTCB-205ENST00000487704 USP35Q9P2H5 1018 aa11.89□□□□□ -0.51
RTCB-205ENST00000487704 THRAP3Q9Y2W1 955 aaKnown RBP11.89□□□□□ -0.51
RTCB-205ENST00000487704 ATP10DQ9P241 1426 aa11.88□□□□□ -0.51
RTCB-205ENST00000487704 CLTCL1P53675 1640 aa11.88□□□□□ -0.51
RTCB-205ENST00000487704 TNS4Q8IZW8 715 aa11.87□□□□□ -0.51
RTCB-205ENST00000487704 KIAA0232Q92628 1395 aa11.87□□□□□ -0.51
RTCB-205ENST00000487704 RGPD8O14715 1765 aaPredicted RBP11.87□□□□□ -0.51
RTCB-205ENST00000487704 OVOS2A0A0G2JMS6 1433 aa11.86□□□□□ -0.51
RTCB-205ENST00000487704 OVOS2A0A0J9YW53 1432 aa11.86□□□□□ -0.51
RTCB-205ENST00000487704 OVOS2Q6IE36 1432 aa11.86□□□□□ -0.51
RTCB-205ENST00000487704 EVA1CP58658 441 aa11.86□□□□□ -0.51
RTCB-205ENST00000487704 CHRNA2Q15822 529 aa11.86□□□□□ -0.51
RTCB-205ENST00000487704 PMFBP1Q8TBY8 1022 aa11.86□□□□□ -0.51
RTCB-205ENST00000487704 ROCK1Q13464 1354 aa11.86□□□□□ -0.51
RTCB-205ENST00000487704 ALS2Q96Q42 1657 aa11.86□□□□□ -0.51
RTCB-205ENST00000487704 KIF1BO60333 1816 aa11.86□□□□□ -0.51
RTCB-205ENST00000487704 TRPM3Q9HCF6 1732 aaPredicted RBP11.86□□□□□ -0.51
RTCB-205ENST00000487704 SSH2Q76I76 1423 aa11.86□□□□□ -0.51
RTCB-205ENST00000487704 GPRASP1Q5JY77 1395 aa11.85□□□□□ -0.51
RTCB-205ENST00000487704 FAM50AQ14320 339 aaKnown RBP11.85□□□□□ -0.51
RTCB-205ENST00000487704 TXNRD1Q16881 649 aa11.85□□□□□ -0.51
RTCB-205ENST00000487704 DHX57Q6P158 1386 aaKnown RBP11.84□□□□□ -0.51
RTCB-205ENST00000487704 PEAK1Q9H792 1746 aa11.84□□□□□ -0.51
RTCB-205ENST00000487704 LARP1Q6PKG0 1096 aaKnown RBP11.84□□□□□ -0.51
RTCB-205ENST00000487704 PTF1AQ7RTS3 328 aa11.84□□□□□ -0.51
RTCB-205ENST00000487704 PELP1Q8IZL8 1130 aaKnown RBP11.84□□□□□ -0.51
RTCB-205ENST00000487704 CRYBG1Q9Y4K1 1723 aa11.83□□□□□ -0.52
RTCB-205ENST00000487704 ANKARQ7Z5J8 1434 aa11.83□□□□□ -0.52
RTCB-205ENST00000487704 ACIN1Q9UKV3 1341 aaKnown RBP11.83□□□□□ -0.52
RTCB-205ENST00000487704 AATKQ6ZMQ8 1374 aa11.82□□□□□ -0.52
RTCB-205ENST00000487704 SBF2Q86WG5 1849 aa11.82□□□□□ -0.52
RTCB-205ENST00000487704 YBX3P16989 372 aaKnown RBP eCLIP11.82□□□□□ -0.52
RTCB-205ENST00000487704 JMYQ8N9B5 988 aa11.82□□□□□ -0.52
RTCB-205ENST00000487704 BCL9O00512 1426 aa11.82□□□□□ -0.52
RTCB-205ENST00000487704 PARP4Q9UKK3 1724 aaKnown RBP11.82□□□□□ -0.52
RTCB-205ENST00000487704 ADCY9O60503 1353 aa11.81□□□□□ -0.52
RTCB-205ENST00000487704 KNDC1Q76NI1 1749 aa11.81□□□□□ -0.52
RTCB-205ENST00000487704 TMEM132EQ6IEE7 984 aa11.81□□□□□ -0.52
RTCB-205ENST00000487704 SLC16A10Q8TF71 515 aa11.81□□□□□ -0.52
RTCB-205ENST00000487704 IFT172Q9UG01 1749 aa11.8□□□□□ -0.52
RTCB-205ENST00000487704 KIF3CO14782 793 aa11.8□□□□□ -0.52
RTCB-205ENST00000487704 ZC3H6P61129 1189 aaKnown RBP11.8□□□□□ -0.52
RTCB-205ENST00000487704 ATP7BP35670 1465 aa11.8□□□□□ -0.52
RTCB-205ENST00000487704 ADGRF5Q8IZF2 1346 aa11.8□□□□□ -0.52
RTCB-205ENST00000487704 PPLO60437 1756 aa11.79□□□□□ -0.52
RTCB-205ENST00000487704 YTHDC2Q9H6S0 1430 aaKnown RBP11.79□□□□□ -0.52
RTCB-205ENST00000487704 NLGN2Q8NFZ4 835 aa11.79□□□□□ -0.52
RTCB-205ENST00000487704 POLD1P28340 1107 aa11.78□□□□□ -0.52
RTCB-205ENST00000487704 APLP2Q06481 763 aa11.78□□□□□ -0.52
RTCB-205ENST00000487704 PAK3O75914 559 aaPredicted RBP11.77□□□□□ -0.53
RTCB-205ENST00000487704 DDB1Q16531 1140 aa11.77□□□□□ -0.53
RTCB-205ENST00000487704 KLHL34Q8N239 644 aa11.77□□□□□ -0.53
RTCB-205ENST00000487704 ZNF526Q8TF50 670 aaPredicted RBP11.77□□□□□ -0.53
RTCB-205ENST00000487704 PCNTO95613 3336 aa11.76□□□□□ -0.53
RTCB-205ENST00000487704 KLRG1Q96E93 195 aa11.76□□□□□ -0.53
RTCB-205ENST00000487704 TOMM70O94826 608 aa11.75□□□□□ -0.53
RTCB-205ENST00000487704 MARCH10Q8NA82 808 aaPredicted RBP11.75□□□□□ -0.53
RTCB-205ENST00000487704 CPDO75976 1380 aa11.75□□□□□ -0.53
RTCB-205ENST00000487704 NGDNQ8NEJ9 315 aaKnown RBP11.74□□□□□ -0.53
RTCB-205ENST00000487704 WWC3Q9ULE0 1092 aa11.74□□□□□ -0.53
RTCB-205ENST00000487704 COL24A1Q17RW2 1714 aa11.74□□□□□ -0.53
RTCB-205ENST00000487704 CRB1P82279 1406 aa11.73□□□□□ -0.53
RTCB-205ENST00000487704 PRAM1Q96QH2 718 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms