RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 ACEP12821 1306 aa22.11■■□□□ 1.13
CTSA-207ENST00000484855 IRX6P78412 446 aaPredicted RBP22.11■■□□□ 1.13
CTSA-207ENST00000484855 CDCA7LQ96GN5 454 aa22.11■■□□□ 1.13
CTSA-207ENST00000484855 APAF1O14727 1248 aa22.1■■□□□ 1.13
CTSA-207ENST00000484855 USP6P35125 1406 aa22.09■■□□□ 1.13
CTSA-207ENST00000484855 ANKARQ7Z5J8 1434 aa22.09■■□□□ 1.13
CTSA-207ENST00000484855 ZNF521Q96K83 1311 aa22.08■■□□□ 1.13
CTSA-207ENST00000484855 NWD1Q149M9 1564 aa22.07■■□□□ 1.12
CTSA-207ENST00000484855 NGEFQ8N5V2 710 aa22.07■■□□□ 1.12
CTSA-207ENST00000484855 COG3Q96JB2 828 aa22.07■■□□□ 1.12
CTSA-207ENST00000484855 IQSEC2Q5JU85 1478 aa22.07■■□□□ 1.12
CTSA-207ENST00000484855 RUNDC1Q96C34 613 aa22.06■■□□□ 1.12
CTSA-207ENST00000484855 ZRANB1Q9UGI0 708 aa22.06■■□□□ 1.12
CTSA-207ENST00000484855 PNPLA6Q8IY17 1366 aa22.06■■□□□ 1.12
CTSA-207ENST00000484855 TTC21BQ7Z4L5 1316 aa22.06■■□□□ 1.12
CTSA-207ENST00000484855 RNF123Q5XPI4 1314 aa22.05■■□□□ 1.12
CTSA-207ENST00000484855 U2AF1L5P0DN76 240 aaPredicted RBP22.05■■□□□ 1.12
CTSA-207ENST00000484855 U2AF1Q01081 240 aaKnown RBP eCLIP22.05■■□□□ 1.12
CTSA-207ENST00000484855 AATKQ6ZMQ8 1374 aa22.04■■□□□ 1.12
CTSA-207ENST00000484855 GOLGA2Q08379 1002 aa22.04■■□□□ 1.12
CTSA-207ENST00000484855 ERICH6BQ5W0A0 696 aa22.04■■□□□ 1.12
CTSA-207ENST00000484855 PMFBP1Q8TBY8 1022 aa22.04■■□□□ 1.12
CTSA-207ENST00000484855 POLKQ9UBT6 870 aa22.04■■□□□ 1.12
CTSA-207ENST00000484855 ADGRL3Q9HAR2 1447 aa22.02■■□□□ 1.12
CTSA-207ENST00000484855 SSH2Q76I76 1423 aa22.02■■□□□ 1.12
CTSA-207ENST00000484855 U2SURPO15042 1029 aaKnown RBP22.02■■□□□ 1.12
CTSA-207ENST00000484855 DIAPH1O60610 1272 aaKnown RBP22.02■■□□□ 1.12
CTSA-207ENST00000484855 RCAN3Q9UKA8 241 aa22.02■■□□□ 1.12
CTSA-207ENST00000484855 CDK12Q9NYV4 1490 aaPredicted RBP22.02■■□□□ 1.12
CTSA-207ENST00000484855 OVOS2A0A0J9YW53 1432 aa22.01■■□□□ 1.11
CTSA-207ENST00000484855 OVOS2Q6IE36 1432 aa22.01■■□□□ 1.11
CTSA-207ENST00000484855 FBLN1P23142 703 aa22.01■■□□□ 1.11
CTSA-207ENST00000484855 NGDNQ8NEJ9 315 aaKnown RBP22.01■■□□□ 1.11
CTSA-207ENST00000484855 PPM1GO15355 546 aaPredicted RBP22■■□□□ 1.11
CTSA-207ENST00000484855 TCP11L2Q8N4U5 519 aa21.99■■□□□ 1.11
CTSA-207ENST00000484855 TTC21AQ8NDW8 1320 aa21.99■■□□□ 1.11
CTSA-207ENST00000484855 EMILIN1Q9Y6C2 1016 aa21.98■■□□□ 1.11
CTSA-207ENST00000484855 DUSP27Q5VZP5 1158 aa21.98■■□□□ 1.11
CTSA-207ENST00000484855 RBM33Q96EV2 1170 aaKnown RBP21.98■■□□□ 1.11
CTSA-207ENST00000484855 PIK3C2AO00443 1686 aa21.97■■□□□ 1.11
CTSA-207ENST00000484855 SLFN5Q08AF3 891 aa21.97■■□□□ 1.11
CTSA-207ENST00000484855 RRP7AQ9Y3A4 280 aaKnown RBP21.95■■□□□ 1.1
CTSA-207ENST00000484855 NEUROD2Q15784 382 aa21.95■■□□□ 1.1
CTSA-207ENST00000484855 WWC1Q8IX03 1113 aa21.95■■□□□ 1.1
CTSA-207ENST00000484855 LRRC7Q96NW7 1537 aa21.94■■□□□ 1.1
CTSA-207ENST00000484855 RRP1P56182 461 aaKnown RBP21.94■■□□□ 1.1
CTSA-207ENST00000484855 RRS1Q15050 365 aaKnown RBP21.94■■□□□ 1.1
CTSA-207ENST00000484855 E9PSI1 815 aa21.94■■□□□ 1.1
CTSA-207ENST00000484855 C14orf37Q86TY3 774 aa21.94■■□□□ 1.1
CTSA-207ENST00000484855 PELP1Q8IZL8 1130 aaKnown RBP21.93■■□□□ 1.1
CTSA-207ENST00000484855 PLEKHF1Q96S99 279 aa21.93■■□□□ 1.1
CTSA-207ENST00000484855 USP31Q70CQ4 1352 aa21.93■■□□□ 1.1
CTSA-207ENST00000484855 USP54Q70EL1 1684 aa21.93■■□□□ 1.1
CTSA-207ENST00000484855 MAPK8IP3Q9UPT6 1336 aa21.93■■□□□ 1.1
CTSA-207ENST00000484855 TRMT2AQ8IZ69 625 aaKnown RBP21.92■■□□□ 1.1
CTSA-207ENST00000484855 NCBP3Q53F19 620 aaKnown RBP21.92■■□□□ 1.1
CTSA-207ENST00000484855 PNNQ9H307 717 aaKnown RBP21.92■■□□□ 1.1
CTSA-207ENST00000484855 SPINK5Q9NQ38 1064 aaPredicted RBP21.92■■□□□ 1.1
CTSA-207ENST00000484855 PPP4R2Q9NY27 417 aa21.92■■□□□ 1.1
CTSA-207ENST00000484855 CCDC27Q2M243 656 aa21.91■■□□□ 1.1
CTSA-207ENST00000484855 MARF1Q9Y4F3 1742 aaKnown RBP21.91■■□□□ 1.1
CTSA-207ENST00000484855 PHF23Q9BUL5 403 aaPredicted RBP21.91■■□□□ 1.1
CTSA-207ENST00000484855 DMRT2Q9Y5R5 561 aa21.91■■□□□ 1.1
CTSA-207ENST00000484855 PEAK1Q9H792 1746 aa21.9■■□□□ 1.1
CTSA-207ENST00000484855 PHF8Q9UPP1 1060 aa21.9■■□□□ 1.1
CTSA-207ENST00000484855 STRCP1A6NGW2 1772 aa21.9■■□□□ 1.1
CTSA-207ENST00000484855 KDM4FA0A1W2PPD8 638 aa21.89■■□□□ 1.09
CTSA-207ENST00000484855 IL13P35225 146 aa21.88■■□□□ 1.09
CTSA-207ENST00000484855 PROSER2Q86WR7 435 aaPredicted RBP21.88■■□□□ 1.09
CTSA-207ENST00000484855 FCHSD2O94868 740 aa21.88■■□□□ 1.09
CTSA-207ENST00000484855 HSPA2P54652 639 aa21.87■■□□□ 1.09
CTSA-207ENST00000484855 WDR63Q8IWG1 891 aa21.87■■□□□ 1.09
CTSA-207ENST00000484855 RSPH6AQ9H0K4 717 aa21.86■■□□□ 1.09
CTSA-207ENST00000484855 TMPOP42166 694 aaKnown RBP21.85■■□□□ 1.09
CTSA-207ENST00000484855 LMTK3Q96Q04 1460 aa21.85■■□□□ 1.09
CTSA-207ENST00000484855 ESCO1Q5FWF5 840 aa21.85■■□□□ 1.09
CTSA-207ENST00000484855 SOX12O15370 315 aa21.84■■□□□ 1.09
CTSA-207ENST00000484855 NEFMP07197 916 aa21.84■■□□□ 1.09
CTSA-207ENST00000484855 PRKAR2BP31323 418 aa21.84■■□□□ 1.09
CTSA-207ENST00000484855 NLRP6P59044 892 aa21.83■■□□□ 1.09
CTSA-207ENST00000484855 PAK3O75914 559 aaPredicted RBP21.82■■□□□ 1.08
CTSA-207ENST00000484855 HMOX1P09601 288 aa21.82■■□□□ 1.08
CTSA-207ENST00000484855 KIF1AQ12756 1690 aa21.82■■□□□ 1.08
CTSA-207ENST00000484855 STRCQ7RTU9 1775 aa21.82■■□□□ 1.08
CTSA-207ENST00000484855 RGPD1P0DJD0 1748 aa21.81■■□□□ 1.08
CTSA-207ENST00000484855 ABTB2Q8N961 1025 aa21.81■■□□□ 1.08
CTSA-207ENST00000484855 MAP3K19Q56UN5 1328 aa21.8■■□□□ 1.08
CTSA-207ENST00000484855 SBNO1A3KN83 1393 aa21.8■■□□□ 1.08
CTSA-207ENST00000484855 DLG5Q8TDM6 1919 aa21.8■■□□□ 1.08
CTSA-207ENST00000484855 EIF4A2Q14240 407 aaKnown RBP21.8■■□□□ 1.08
CTSA-207ENST00000484855 RIPK4P57078 832 aa21.79■■□□□ 1.08
CTSA-207ENST00000484855 C19orf44Q9H6X5 657 aa21.79■■□□□ 1.08
CTSA-207ENST00000484855 TRIM35Q9UPQ4 493 aa21.79■■□□□ 1.08
CTSA-207ENST00000484855 FLT4P35916 1363 aa21.79■■□□□ 1.08
CTSA-207ENST00000484855 PLIN1O60240 522 aa21.78■■□□□ 1.08
CTSA-207ENST00000484855 PSME1Q06323 249 aa21.78■■□□□ 1.08
CTSA-207ENST00000484855 NUTM2GQ5VZR2 741 aa21.78■■□□□ 1.08
CTSA-207ENST00000484855 B4GALNT3Q6L9W6 998 aa21.78■■□□□ 1.08
CTSA-207ENST00000484855 TMEM94Q12767 1356 aa21.78■■□□□ 1.08
CTSA-207ENST00000484855 LTN1O94822 1766 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms