RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 ANO8Q9HCE9 1232 aaPredicted RBP25.16■■□□□ 1.62
LIMS2-215ENST00000484252 FYB1O15117 783 aa25.16■■□□□ 1.62
LIMS2-215ENST00000484252 HDGFL2Q7Z4V5 671 aaPredicted RBP25.15■■□□□ 1.62
LIMS2-215ENST00000484252 U2SURPO15042 1029 aaKnown RBP25.14■■□□□ 1.62
LIMS2-215ENST00000484252 TNNQ9UQP3 1299 aa25.14■■□□□ 1.62
LIMS2-215ENST00000484252 MINK1Q8N4C8 1332 aaPredicted RBP25.14■■□□□ 1.62
LIMS2-215ENST00000484252 DZIP1LQ8IYY4 767 aaKnown RBP25.14■■□□□ 1.61
LIMS2-215ENST00000484252 ALKQ9UM73 1620 aa25.14■■□□□ 1.61
LIMS2-215ENST00000484252 CYB5RLQ6IPT4 315 aa25.13■■□□□ 1.61
LIMS2-215ENST00000484252 FTSJ3Q8IY81 847 aaKnown RBP25.13■■□□□ 1.61
LIMS2-215ENST00000484252 PNPLA6Q8IY17 1366 aa25.12■■□□□ 1.61
LIMS2-215ENST00000484252 TRIM35Q9UPQ4 493 aa25.12■■□□□ 1.61
LIMS2-215ENST00000484252 PDZRN3Q9UPQ7 1066 aa25.12■■□□□ 1.61
LIMS2-215ENST00000484252 ARHGEF40Q8TER5 1519 aa25.12■■□□□ 1.61
LIMS2-215ENST00000484252 BECN1Q14457 450 aa25.1■■□□□ 1.61
LIMS2-215ENST00000484252 DIAPH1O60610 1272 aaKnown RBP25.09■■□□□ 1.61
LIMS2-215ENST00000484252 KIF20BQ96Q89 1820 aa25.09■■□□□ 1.61
LIMS2-215ENST00000484252 CDC42BPGQ6DT37 1551 aa25.09■■□□□ 1.61
LIMS2-215ENST00000484252 EXOSC9Q06265 439 aaKnown RBP25.09■■□□□ 1.61
LIMS2-215ENST00000484252 TSR2Q969E8 191 aaKnown RBP25.09■■□□□ 1.61
LIMS2-215ENST00000484252 UPF2Q9HAU5 1272 aaKnown RBP25.09■■□□□ 1.61
LIMS2-215ENST00000484252 SMC4Q9NTJ3 1288 aa25.09■■□□□ 1.61
LIMS2-215ENST00000484252 DLC1Q96QB1 1528 aa25.09■■□□□ 1.61
LIMS2-215ENST00000484252 GSE1Q14687 1217 aa25.08■■□□□ 1.6
LIMS2-215ENST00000484252 CDK19Q9BWU1 502 aa25.08■■□□□ 1.6
LIMS2-215ENST00000484252 PPP6R1Q9UPN7 881 aa25.08■■□□□ 1.6
LIMS2-215ENST00000484252 SEC24BO95487 1268 aa25.07■■□□□ 1.6
LIMS2-215ENST00000484252 REREQ9P2R6 1566 aa25.06■■□□□ 1.6
LIMS2-215ENST00000484252 DDX19BQ9UMR2 479 aa25.06■■□□□ 1.6
LIMS2-215ENST00000484252 DIP2BQ9P265 1576 aa25.06■■□□□ 1.6
LIMS2-215ENST00000484252 RIMBP3CA6NJZ7 1639 aa25.05■■□□□ 1.6
LIMS2-215ENST00000484252 RIMBP3BA6NNM3 1639 aa25.05■■□□□ 1.6
LIMS2-215ENST00000484252 RIMBP3Q9UFD9 1639 aa25.05■■□□□ 1.6
LIMS2-215ENST00000484252 RIPK4P57078 832 aa25.05■■□□□ 1.6
LIMS2-215ENST00000484252 HDAC1Q13547 482 aaPredicted RBP25.05■■□□□ 1.6
LIMS2-215ENST00000484252 ATP7BP35670 1465 aa25.04■■□□□ 1.6
LIMS2-215ENST00000484252 ATF7IPQ6VMQ6 1270 aa25.04■■□□□ 1.6
LIMS2-215ENST00000484252 TRIM27P14373 513 aa25.03■■□□□ 1.6
LIMS2-215ENST00000484252 FBXO31Q5XUX0 539 aaPredicted RBP25.03■■□□□ 1.6
LIMS2-215ENST00000484252 SSH1Q8WYL5 1049 aa25.03■■□□□ 1.6
LIMS2-215ENST00000484252 AGLP35573 1532 aa25.03■■□□□ 1.6
LIMS2-215ENST00000484252 FCHSD2O94868 740 aa25.03■■□□□ 1.6
LIMS2-215ENST00000484252 FAM69CQ0P6D2 419 aa25.03■■□□□ 1.6
LIMS2-215ENST00000484252 STAG3Q9UJ98 1225 aa25.03■■□□□ 1.6
LIMS2-215ENST00000484252 KIF16BQ96L93 1317 aa25.02■■□□□ 1.6
LIMS2-215ENST00000484252 TBC1D32Q96NH3 1257 aa25.01■■□□□ 1.59
LIMS2-215ENST00000484252 CABP1Q9NZU7 370 aa25.01■■□□□ 1.59
LIMS2-215ENST00000484252 IPO8O15397 1037 aaKnown RBP25.01■■□□□ 1.59
LIMS2-215ENST00000484252 ALDH1L2Q3SY69 923 aa25■■□□□ 1.59
LIMS2-215ENST00000484252 ZNF428Q96B54 188 aa24.98■■□□□ 1.59
LIMS2-215ENST00000484252 SENP3Q9H4L4 574 aaPredicted RBP24.98■■□□□ 1.59
LIMS2-215ENST00000484252 TSPOAP1O95153 1857 aa24.98■■□□□ 1.59
LIMS2-215ENST00000484252 ITPRIPQ8IWB1 547 aa24.98■■□□□ 1.59
LIMS2-215ENST00000484252 NOB1Q9ULX3 412 aaKnown RBP24.98■■□□□ 1.59
LIMS2-215ENST00000484252 A2ML1A8K2U0 1454 aa24.97■■□□□ 1.59
LIMS2-215ENST00000484252 LRRC7Q96NW7 1537 aa24.97■■□□□ 1.59
LIMS2-215ENST00000484252 IL27Q8NEV9 243 aa24.97■■□□□ 1.59
LIMS2-215ENST00000484252 FAM135BQ49AJ0 1406 aa24.97■■□□□ 1.59
LIMS2-215ENST00000484252 SPATA31D1Q6ZQQ2 1576 aa24.97■■□□□ 1.59
LIMS2-215ENST00000484252 FRAT2O75474 233 aaPredicted RBP24.97■■□□□ 1.59
LIMS2-215ENST00000484252 PPIP5K1Q6PFW1 1433 aa24.95■■□□□ 1.59
LIMS2-215ENST00000484252 RSPH6AQ9H0K4 717 aa24.95■■□□□ 1.58
LIMS2-215ENST00000484252 RIMS2Q9UQ26 1411 aa24.94■■□□□ 1.58
LIMS2-215ENST00000484252 SETD1AO15047 1707 aaKnown RBP24.94■■□□□ 1.58
LIMS2-215ENST00000484252 BRPF1P55201 1214 aaPredicted RBP24.94■■□□□ 1.58
LIMS2-215ENST00000484252 SMC5Q8IY18 1101 aa24.93■■□□□ 1.58
LIMS2-215ENST00000484252 POLKQ9UBT6 870 aa24.93■■□□□ 1.58
LIMS2-215ENST00000484252 CALD1Q05682 793 aaKnown RBP24.93■■□□□ 1.58
LIMS2-215ENST00000484252 ZBTB40Q9NUA8 1239 aa24.93■■□□□ 1.58
LIMS2-215ENST00000484252 TMEM57Q8N5G2 664 aa24.92■■□□□ 1.58
LIMS2-215ENST00000484252 EDC4Q6P2E9 1401 aaKnown RBP24.91■■□□□ 1.58
LIMS2-215ENST00000484252 PRKAR2BP31323 418 aa24.91■■□□□ 1.58
LIMS2-215ENST00000484252 CPSF1Q10570 1443 aaKnown RBP24.89■■□□□ 1.58
LIMS2-215ENST00000484252 NFE2L2Q16236 605 aa24.89■■□□□ 1.58
LIMS2-215ENST00000484252 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.89■■□□□ 1.58
LIMS2-215ENST00000484252 CHMP4BQ9H444 224 aaKnown RBP24.89■■□□□ 1.57
LIMS2-215ENST00000484252 WAPLQ7Z5K2 1190 aa24.88■■□□□ 1.57
LIMS2-215ENST00000484252 CDK12Q9NYV4 1490 aaPredicted RBP24.87■■□□□ 1.57
LIMS2-215ENST00000484252 ANTXR1Q9H6X2 564 aa24.87■■□□□ 1.57
LIMS2-215ENST00000484252 AATKQ6ZMQ8 1374 aa24.86■■□□□ 1.57
LIMS2-215ENST00000484252 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.85■■□□□ 1.57
LIMS2-215ENST00000484252 TBC1D2Q9BYX2 928 aa24.85■■□□□ 1.57
LIMS2-215ENST00000484252 ARHGAP45Q92619 1136 aa24.85■■□□□ 1.57
LIMS2-215ENST00000484252 WASLO00401 505 aaPredicted RBP24.84■■□□□ 1.57
LIMS2-215ENST00000484252 MAP2P11137 1827 aaKnown RBP24.84■■□□□ 1.57
LIMS2-215ENST00000484252 C22orf23Q9BZE7 217 aa24.84■■□□□ 1.57
LIMS2-215ENST00000484252 GNAI1P63096 354 aa24.83■■□□□ 1.57
LIMS2-215ENST00000484252 IFT57Q9NWB7 429 aa24.83■■□□□ 1.57
LIMS2-215ENST00000484252 IL13P35225 146 aa24.82■■□□□ 1.56
LIMS2-215ENST00000484252 NUCB1Q02818 461 aa24.82■■□□□ 1.56
LIMS2-215ENST00000484252 SIRT1Q96EB6 747 aa24.82■■□□□ 1.56
LIMS2-215ENST00000484252 NRXN3Q9Y4C0 1643 aa24.82■■□□□ 1.56
LIMS2-215ENST00000484252 PIK3R4Q99570 1358 aa24.82■■□□□ 1.56
LIMS2-215ENST00000484252 SLKQ9H2G2 1235 aaPredicted RBP24.82■■□□□ 1.56
LIMS2-215ENST00000484252 LMOD3Q0VAK6 560 aa24.81■■□□□ 1.56
LIMS2-215ENST00000484252 PTCH1Q13635 1447 aa24.81■■□□□ 1.56
LIMS2-215ENST00000484252 KNDC1Q76NI1 1749 aa24.81■■□□□ 1.56
LIMS2-215ENST00000484252 VAMP4O75379 141 aa24.8■■□□□ 1.56
LIMS2-215ENST00000484252 PHACTR3Q96KR7 559 aa24.8■■□□□ 1.56
LIMS2-215ENST00000484252 MRPL50Q8N5N7 158 aaKnown RBP24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms