RNA–Protein interactions for RNA: ENST00000484101.5

UFD1-208, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 751 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-208ENST00000484101 PPP4R2Q9NY27 417 aa12.74□□□□□ -0.37
UFD1-208ENST00000484101 ADAMTS8Q9UP79 889 aa12.74□□□□□ -0.37
UFD1-208ENST00000484101 SPATA31A6Q5VVP1 1343 aa12.73□□□□□ -0.37
UFD1-208ENST00000484101 COL16A1Q07092 1604 aaPredicted RBP12.73□□□□□ -0.37
UFD1-208ENST00000484101 TMEM94Q12767 1356 aa12.72□□□□□ -0.37
UFD1-208ENST00000484101 WASLO00401 505 aaPredicted RBP12.72□□□□□ -0.37
UFD1-208ENST00000484101 SAFB2Q14151 953 aaKnown RBP eCLIP12.72□□□□□ -0.37
UFD1-208ENST00000484101 TBX22Q9Y458 520 aa12.72□□□□□ -0.37
UFD1-208ENST00000484101 RGS12O14924 1447 aa12.71□□□□□ -0.37
UFD1-208ENST00000484101 CPSF1Q10570 1443 aaKnown RBP12.71□□□□□ -0.37
UFD1-208ENST00000484101 ZNF521Q96K83 1311 aa12.71□□□□□ -0.37
UFD1-208ENST00000484101 RBM33Q96EV2 1170 aaKnown RBP12.71□□□□□ -0.37
UFD1-208ENST00000484101 PPIP5K1Q6PFW1 1433 aa12.71□□□□□ -0.38
UFD1-208ENST00000484101 PLEKHH1Q9ULM0 1364 aa12.7□□□□□ -0.38
UFD1-208ENST00000484101 NRKQ7Z2Y5 1582 aa12.7□□□□□ -0.38
UFD1-208ENST00000484101 TXNDC2Q86VQ3 553 aa12.7□□□□□ -0.38
UFD1-208ENST00000484101 BCANQ96GW7 911 aa12.7□□□□□ -0.38
UFD1-208ENST00000484101 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.69□□□□□ -0.38
UFD1-208ENST00000484101 RCAN3Q9UKA8 241 aa12.69□□□□□ -0.38
UFD1-208ENST00000484101 COL3A1P02461 1466 aaPredicted RBP12.69□□□□□ -0.38
UFD1-208ENST00000484101 GOLGA2Q08379 1002 aa12.68□□□□□ -0.38
UFD1-208ENST00000484101 ZNF692Q9BU19 519 aaPredicted RBP12.68□□□□□ -0.38
UFD1-208ENST00000484101 PNNQ9H307 717 aaKnown RBP12.68□□□□□ -0.38
UFD1-208ENST00000484101 CCDC61Q9Y6R9 512 aa12.68□□□□□ -0.38
UFD1-208ENST00000484101 ROBO2Q9HCK4 1378 aa12.68□□□□□ -0.38
UFD1-208ENST00000484101 RUNDC1Q96C34 613 aa12.67□□□□□ -0.38
UFD1-208ENST00000484101 AATKQ6ZMQ8 1374 aa12.67□□□□□ -0.38
UFD1-208ENST00000484101 ANKARQ7Z5J8 1434 aa12.66□□□□□ -0.38
UFD1-208ENST00000484101 NUTM2BA6NNL0 878 aaPredicted RBP12.66□□□□□ -0.38
UFD1-208ENST00000484101 NUTM2EB1AL46 878 aaPredicted RBP12.66□□□□□ -0.38
UFD1-208ENST00000484101 E9PSI1 815 aa12.66□□□□□ -0.38
UFD1-208ENST00000484101 LTKP29376 864 aa12.66□□□□□ -0.38
UFD1-208ENST00000484101 MTHFSP49914 203 aa12.66□□□□□ -0.38
UFD1-208ENST00000484101 RRP1P56182 461 aaKnown RBP12.66□□□□□ -0.38
UFD1-208ENST00000484101 WAPLQ7Z5K2 1190 aa12.66□□□□□ -0.38
UFD1-208ENST00000484101 NUTM2AQ8IVF1 878 aaPredicted RBP12.66□□□□□ -0.38
UFD1-208ENST00000484101 CABP1Q9NZU7 370 aa12.66□□□□□ -0.38
UFD1-208ENST00000484101 SLAIN2Q9P270 581 aa12.66□□□□□ -0.38
UFD1-208ENST00000484101 PNPLA6Q8IY17 1366 aa12.66□□□□□ -0.38
UFD1-208ENST00000484101 NKTRP30414 1462 aaKnown RBP12.65□□□□□ -0.38
UFD1-208ENST00000484101 NALCNQ8IZF0 1738 aa12.65□□□□□ -0.38
UFD1-208ENST00000484101 CHD2O14647 1828 aaKnown RBP12.65□□□□□ -0.38
UFD1-208ENST00000484101 FYB1O15117 783 aa12.65□□□□□ -0.38
UFD1-208ENST00000484101 CCDC27Q2M243 656 aa12.65□□□□□ -0.38
UFD1-208ENST00000484101 NUDT16Q96DE0 195 aaKnown RBP12.65□□□□□ -0.38
UFD1-208ENST00000484101 MAP2P11137 1827 aaKnown RBP12.65□□□□□ -0.39
UFD1-208ENST00000484101 AFF2P51816 1311 aa12.64□□□□□ -0.39
UFD1-208ENST00000484101 IFFO2Q5TF58 517 aa12.64□□□□□ -0.39
UFD1-208ENST00000484101 USP54Q70EL1 1684 aa12.64□□□□□ -0.39
UFD1-208ENST00000484101 PTPRUQ92729 1446 aa12.63□□□□□ -0.39
UFD1-208ENST00000484101 FMN2Q9NZ56 1722 aa12.63□□□□□ -0.39
UFD1-208ENST00000484101 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.63□□□□□ -0.39
UFD1-208ENST00000484101 LRP5O75197 1615 aa12.62□□□□□ -0.39
UFD1-208ENST00000484101 PLEKHG3A1L390 1219 aa12.62□□□□□ -0.39
UFD1-208ENST00000484101 RBM6P78332 1123 aaKnown RBP12.62□□□□□ -0.39
UFD1-208ENST00000484101 SLFN5Q08AF3 891 aa12.62□□□□□ -0.39
UFD1-208ENST00000484101 PROSER2Q86WR7 435 aaPredicted RBP12.62□□□□□ -0.39
UFD1-208ENST00000484101 TRMT2AQ8IZ69 625 aaKnown RBP12.62□□□□□ -0.39
UFD1-208ENST00000484101 APAF1O14727 1248 aa12.61□□□□□ -0.39
UFD1-208ENST00000484101 KCNA6P17658 529 aa12.61□□□□□ -0.39
UFD1-208ENST00000484101 DUSP27Q5VZP5 1158 aa12.61□□□□□ -0.39
UFD1-208ENST00000484101 WDR63Q8IWG1 891 aa12.61□□□□□ -0.39
UFD1-208ENST00000484101 GGNBP2Q9H3C7 697 aa12.61□□□□□ -0.39
UFD1-208ENST00000484101 TNNT2P45379 298 aaPredicted RBP12.6□□□□□ -0.39
UFD1-208ENST00000484101 AMOTL2Q9Y2J4 779 aa12.6□□□□□ -0.39
UFD1-208ENST00000484101 SALL2Q9Y467 1007 aaPredicted RBP12.6□□□□□ -0.39
UFD1-208ENST00000484101 USP6P35125 1406 aa12.6□□□□□ -0.39
UFD1-208ENST00000484101 NWD1Q149M9 1564 aa12.6□□□□□ -0.39
UFD1-208ENST00000484101 TTC21AQ8NDW8 1320 aa12.6□□□□□ -0.39
UFD1-208ENST00000484101 MSH6P52701 1360 aa12.59□□□□□ -0.39
UFD1-208ENST00000484101 DIAPH1O60610 1272 aaKnown RBP12.59□□□□□ -0.39
UFD1-208ENST00000484101 IRX6P78412 446 aaPredicted RBP12.59□□□□□ -0.39
UFD1-208ENST00000484101 CCDC146Q8IYE0 955 aa12.59□□□□□ -0.39
UFD1-208ENST00000484101 CDCA7LQ96GN5 454 aa12.59□□□□□ -0.39
UFD1-208ENST00000484101 COG3Q96JB2 828 aa12.59□□□□□ -0.39
UFD1-208ENST00000484101 QTRT2Q9H974 415 aaKnown RBP12.59□□□□□ -0.39
UFD1-208ENST00000484101 MAPK8IP3Q9UPT6 1336 aa12.59□□□□□ -0.39
UFD1-208ENST00000484101 AHDC1Q5TGY3 1603 aaPredicted RBP12.59□□□□□ -0.39
UFD1-208ENST00000484101 U2AF1L5P0DN76 240 aaPredicted RBP12.58□□□□□ -0.4
UFD1-208ENST00000484101 U2AF1Q01081 240 aaKnown RBP eCLIP12.58□□□□□ -0.41e-8■■■□□ 18.7
UFD1-208ENST00000484101 OVOS2A0A0J9YW53 1432 aa12.57□□□□□ -0.4
UFD1-208ENST00000484101 OVOS2Q6IE36 1432 aa12.57□□□□□ -0.4
UFD1-208ENST00000484101 NEFMP07197 916 aa12.57□□□□□ -0.4
UFD1-208ENST00000484101 CT47B1P0C2W7 299 aaPredicted RBP12.57□□□□□ -0.4
UFD1-208ENST00000484101 WWC1Q8IX03 1113 aa12.57□□□□□ -0.4
UFD1-208ENST00000484101 PRR36Q9H6K5 1346 aa12.57□□□□□ -0.4
UFD1-208ENST00000484101 SSH2Q76I76 1423 aa12.56□□□□□ -0.4
UFD1-208ENST00000484101 FCHSD2O94868 740 aa12.56□□□□□ -0.4
UFD1-208ENST00000484101 TCP11L2Q8N4U5 519 aa12.56□□□□□ -0.4
UFD1-208ENST00000484101 SLC26A8Q96RN1 970 aa12.56□□□□□ -0.4
UFD1-208ENST00000484101 MYH16Q9H6N6 1097 aa12.56□□□□□ -0.4
UFD1-208ENST00000484101 IL16Q14005 1332 aa12.56□□□□□ -0.4
UFD1-208ENST00000484101 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.55□□□□□ -0.4
UFD1-208ENST00000484101 CCDC136Q96JN2 1154 aa12.55□□□□□ -0.4
UFD1-208ENST00000484101 USP31Q70CQ4 1352 aa12.55□□□□□ -0.4
UFD1-208ENST00000484101 RGPD8O14715 1765 aaPredicted RBP12.54□□□□□ -0.4
UFD1-208ENST00000484101 CCDC125Q86Z20 511 aa12.54□□□□□ -0.4
UFD1-208ENST00000484101 ACEP12821 1306 aa12.54□□□□□ -0.4
UFD1-208ENST00000484101 TTC21BQ7Z4L5 1316 aa12.54□□□□□ -0.4
UFD1-208ENST00000484101 KIF24Q5T7B8 1368 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms