RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 C16orf71Q8IYS4 520 aaPredicted RBP15.71■□□□□ 0.11
VPS52-218ENST00000482399 ZBTB40Q9NUA8 1239 aa15.71■□□□□ 0.11
VPS52-218ENST00000482399 DUOX2Q9NRD8 1548 aa15.71■□□□□ 0.11
VPS52-218ENST00000482399 UGGT1Q9NYU2 1555 aa15.71■□□□□ 0.11
VPS52-218ENST00000482399 TRIM35Q9UPQ4 493 aa15.71■□□□□ 0.11
VPS52-218ENST00000482399 ATAD2Q6PL18 1390 aa15.71■□□□□ 0.11
VPS52-218ENST00000482399 NUCB1Q02818 461 aa15.71■□□□□ 0.1
VPS52-218ENST00000482399 SMC5Q8IY18 1101 aa15.71■□□□□ 0.1
VPS52-218ENST00000482399 E9PCH4 1651 aa15.71■□□□□ 0.1
VPS52-218ENST00000482399 NECTIN2Q92692 538 aa15.7■□□□□ 0.1
VPS52-218ENST00000482399 NPC1L1Q9UHC9 1359 aa15.7■□□□□ 0.1
VPS52-218ENST00000482399 FSD2A1L4K1 749 aa15.7■□□□□ 0.1
VPS52-218ENST00000482399 FAM83GA6ND36 823 aa15.7■□□□□ 0.1
VPS52-218ENST00000482399 CDC45O75419 566 aa15.7■□□□□ 0.1
VPS52-218ENST00000482399 ERBB4Q15303 1308 aa15.69■□□□□ 0.1
VPS52-218ENST00000482399 ABCA8O94911 1581 aa15.69■□□□□ 0.1
VPS52-218ENST00000482399 ERVK-7P63135 1459 aa15.69■□□□□ 0.1
VPS52-218ENST00000482399 TWISTNBQ3B726 338 aaPredicted RBP15.69■□□□□ 0.1
VPS52-218ENST00000482399 RBM27Q9P2N5 1060 aaKnown RBP15.69■□□□□ 0.1
VPS52-218ENST00000482399 ZMYND15Q9H091 742 aa15.69■□□□□ 0.1
VPS52-218ENST00000482399 CFAP65Q6ZU64 1925 aaKnown RBP15.69■□□□□ 0.1
VPS52-218ENST00000482399 CHMP4BQ9H444 224 aaKnown RBP15.68■□□□□ 0.1
VPS52-218ENST00000482399 TRIM6-TRIM34B2RNG4 842 aa15.68■□□□□ 0.1
VPS52-218ENST00000482399 C14orf93Q9H972 538 aaKnown RBP15.67■□□□□ 0.1
VPS52-218ENST00000482399 FYB1O15117 783 aa15.67■□□□□ 0.1
VPS52-218ENST00000482399 RRS1Q15050 365 aaKnown RBP15.67■□□□□ 0.1
VPS52-218ENST00000482399 RILPL2Q969X0 211 aa15.67■□□□□ 0.1
VPS52-218ENST00000482399 PHACTR3Q96KR7 559 aa15.67■□□□□ 0.1
VPS52-218ENST00000482399 ARHGEF5Q12774 1597 aa15.67■□□□□ 0.1
VPS52-218ENST00000482399 ATP10AO60312 1499 aa15.67■□□□□ 0.1
VPS52-218ENST00000482399 ST18O60284 1047 aa15.66■□□□□ 0.1
VPS52-218ENST00000482399 XPCQ01831 940 aaPredicted RBP15.66■□□□□ 0.1
VPS52-218ENST00000482399 TSHZ3Q63HK5 1081 aa15.66■□□□□ 0.1
VPS52-218ENST00000482399 PTPRTO14522 1441 aa15.66■□□□□ 0.1
VPS52-218ENST00000482399 PLCH2O75038 1416 aa15.66■□□□□ 0.1
VPS52-218ENST00000482399 RAPGEF3O95398 923 aa15.66■□□□□ 0.1
VPS52-218ENST00000482399 BAG4O95429 457 aaKnown RBP15.66■□□□□ 0.1
VPS52-218ENST00000482399 CCDC27Q2M243 656 aa15.66■□□□□ 0.1
VPS52-218ENST00000482399 EMILIN1Q9Y6C2 1016 aa15.66■□□□□ 0.1
VPS52-218ENST00000482399 BMP2KLQ5H9B9 411 aa15.65■□□□□ 0.1
VPS52-218ENST00000482399 TTC37Q6PGP7 1564 aa15.65■□□□□ 0.1
VPS52-218ENST00000482399 PKP1Q13835 747 aa15.65■□□□□ 0.1
VPS52-218ENST00000482399 KRT24Q2M2I5 525 aa15.65■□□□□ 0.1
VPS52-218ENST00000482399 OTUD7AQ8TE49 926 aaPredicted RBP15.65■□□□□ 0.1
VPS52-218ENST00000482399 GCC1Q96CN9 775 aa15.65■□□□□ 0.1
VPS52-218ENST00000482399 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.65■□□□□ 0.1
VPS52-218ENST00000482399 MAST1Q9Y2H9 1570 aa15.65■□□□□ 0.1
VPS52-218ENST00000482399 RAB3GAP1Q15042 981 aa15.65■□□□□ 0.1
VPS52-218ENST00000482399 ABCC2Q92887 1545 aa15.65■□□□□ 0.1
VPS52-218ENST00000482399 CT47B1P0C2W7 299 aaPredicted RBP15.64■□□□□ 0.09
VPS52-218ENST00000482399 CDK19Q9BWU1 502 aa15.64■□□□□ 0.09
VPS52-218ENST00000482399 MIS18AQ9NYP9 233 aa15.64■□□□□ 0.09
VPS52-218ENST00000482399 NEK4P51957 841 aa15.64■□□□□ 0.09
VPS52-218ENST00000482399 ZGPATQ8N5A5 531 aaKnown RBP15.64■□□□□ 0.09
VPS52-218ENST00000482399 WAPLQ7Z5K2 1190 aa15.63■□□□□ 0.09
VPS52-218ENST00000482399 CIZ1Q9ULV3 898 aaPredicted RBP15.63■□□□□ 0.09
VPS52-218ENST00000482399 SYCE3A1L190 88 aa15.63■□□□□ 0.09
VPS52-218ENST00000482399 CCDC173Q0VFZ6 552 aa15.63■□□□□ 0.09
VPS52-218ENST00000482399 RRP9O43818 475 aaKnown RBP15.63■□□□□ 0.09
VPS52-218ENST00000482399 GNAI1P63096 354 aa15.63■□□□□ 0.09
VPS52-218ENST00000482399 PTMSP20962 102 aa15.62■□□□□ 0.09
VPS52-218ENST00000482399 ZRANB1Q9UGI0 708 aa15.62■□□□□ 0.09
VPS52-218ENST00000482399 RBM25P49756 843 aaKnown RBP15.61■□□□□ 0.09
VPS52-218ENST00000482399 INTS3Q68E01 1043 aaKnown RBP15.61■□□□□ 0.09
VPS52-218ENST00000482399 ZSCAN30Q86W11 494 aa15.61■□□□□ 0.09
VPS52-218ENST00000482399 C8orf58Q8NAV2 365 aa15.61■□□□□ 0.09
VPS52-218ENST00000482399 GDPD2Q9HCC8 539 aa15.61■□□□□ 0.09
VPS52-218ENST00000482399 ANO2Q9NQ90 1003 aa15.61■□□□□ 0.09
VPS52-218ENST00000482399 SYNMO15061 1565 aa15.61■□□□□ 0.09
VPS52-218ENST00000482399 NUCB2P80303 420 aa15.61■□□□□ 0.09
VPS52-218ENST00000482399 DTNBO60941 627 aa15.61■□□□□ 0.09
VPS52-218ENST00000482399 IDI1Q13907 227 aa15.61■□□□□ 0.09
VPS52-218ENST00000482399 API5Q9BZZ5 524 aaKnown RBP15.61■□□□□ 0.09
VPS52-218ENST00000482399 MBIPQ9NS73 344 aa15.61■□□□□ 0.09
VPS52-218ENST00000482399 ZBTB7BO15156 539 aaPredicted RBP15.6■□□□□ 0.09
VPS52-218ENST00000482399 RABEP1Q15276 862 aa15.6■□□□□ 0.09
VPS52-218ENST00000482399 SNX21Q969T3 373 aa15.6■□□□□ 0.09
VPS52-218ENST00000482399 PODXL2Q9NZ53 605 aa15.6■□□□□ 0.09
VPS52-218ENST00000482399 A0A1W2PP64 1363 aa15.59■□□□□ 0.09
VPS52-218ENST00000482399 PRIM1P49642 420 aaKnown RBP15.59■□□□□ 0.09
VPS52-218ENST00000482399 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.59■□□□□ 0.09
VPS52-218ENST00000482399 BCL11BQ9C0K0 894 aaPredicted RBP15.59■□□□□ 0.09
VPS52-218ENST00000482399 VAMP4O75379 141 aa15.58■□□□□ 0.09
VPS52-218ENST00000482399 FCHSD2O94868 740 aa15.58■□□□□ 0.09
VPS52-218ENST00000482399 MCM10Q7L590 875 aa15.58■□□□□ 0.09
VPS52-218ENST00000482399 NME9Q86XW9 330 aa15.58■□□□□ 0.09
VPS52-218ENST00000482399 LARP6Q9BRS8 491 aaKnown RBP15.58■□□□□ 0.09
VPS52-218ENST00000482399 UPF3BQ9BZI7 483 aaKnown RBP15.58■□□□□ 0.09
VPS52-218ENST00000482399 CDC42BPBQ9Y5S2 1711 aa15.58■□□□□ 0.09
VPS52-218ENST00000482399 NFE2L2Q16236 605 aa15.58■□□□□ 0.08
VPS52-218ENST00000482399 EXOC6BQ9Y2D4 811 aa15.58■□□□□ 0.08
VPS52-218ENST00000482399 F6X3S4 739 aa15.58■□□□□ 0.08
VPS52-218ENST00000482399 ZSCAN23Q3MJ62 389 aa15.58■□□□□ 0.08
VPS52-218ENST00000482399 PHF23Q9BUL5 403 aaPredicted RBP15.58■□□□□ 0.08
VPS52-218ENST00000482399 CHMP3Q9Y3E7 222 aa15.58■□□□□ 0.08
VPS52-218ENST00000482399 NLRP1Q9C000 1473 aa15.58■□□□□ 0.08
VPS52-218ENST00000482399 ZNF692Q9BU19 519 aaPredicted RBP15.57■□□□□ 0.08
VPS52-218ENST00000482399 ISY1Q9ULR0 285 aaKnown RBP15.57■□□□□ 0.08
VPS52-218ENST00000482399 ANKRD36BQ8N2N9 1353 aa15.57■□□□□ 0.08
VPS52-218ENST00000482399 KLHL40Q2TBA0 621 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms