RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 SERPINA10Q9UK55 444 aa9.91□□□□□ -0.82
UPF3A-207ENST00000481131 RNF223E7ERA6 249 aa9.9□□□□□ -0.82
UPF3A-207ENST00000481131 LCE2BO14633 110 aa9.9□□□□□ -0.82
UPF3A-207ENST00000481131 CCDC97Q96F63 343 aaPredicted RBP9.9□□□□□ -0.82
UPF3A-207ENST00000481131 ADH1BP00325 375 aa9.89□□□□□ -0.83
UPF3A-207ENST00000481131 F12P00748 615 aaPredicted RBP9.89□□□□□ -0.83
UPF3A-207ENST00000481131 VAC14Q08AM6 782 aa9.89□□□□□ -0.83
UPF3A-207ENST00000481131 PRKD2Q9BZL6 878 aa9.89□□□□□ -0.83
UPF3A-207ENST00000481131 WASHC4Q2M389 1173 aa9.88□□□□□ -0.83
UPF3A-207ENST00000481131 MSS51Q4VC12 460 aa9.88□□□□□ -0.83
UPF3A-207ENST00000481131 CALR3Q96L12 384 aaKnown RBP9.88□□□□□ -0.83
UPF3A-207ENST00000481131 PRDM9Q9NQV7 894 aa9.88□□□□□ -0.83
UPF3A-207ENST00000481131 MAP10Q9P2G4 905 aa9.88□□□□□ -0.83
UPF3A-207ENST00000481131 V9GY48 417 aaPredicted RBP9.88□□□□□ -0.83
UPF3A-207ENST00000481131 SPSB2Q99619 263 aa9.87□□□□□ -0.83
UPF3A-207ENST00000481131 DXOO77932 396 aaKnown RBP9.86□□□□□ -0.83
UPF3A-207ENST00000481131 LAPTM4AQ15012 233 aa9.86□□□□□ -0.83
UPF3A-207ENST00000481131 PTPRNQ16849 979 aa9.86□□□□□ -0.83
UPF3A-207ENST00000481131 PLA2G2CQ5R387 149 aa9.86□□□□□ -0.83
UPF3A-207ENST00000481131 HDGFL1Q5TGJ6 251 aa9.86□□□□□ -0.83
UPF3A-207ENST00000481131 MMP16P51512 607 aa9.84□□□□□ -0.83
UPF3A-207ENST00000481131 Q6ZNB5 142 aa9.84□□□□□ -0.83
UPF3A-207ENST00000481131 ALG2Q9H553 416 aa9.84□□□□□ -0.83
UPF3A-207ENST00000481131 GFRA3O60609 400 aa9.83□□□□□ -0.84
UPF3A-207ENST00000481131 SLC6A16Q9GZN6 736 aa9.83□□□□□ -0.84
UPF3A-207ENST00000481131 FKBPLQ9UIM3 349 aa9.83□□□□□ -0.84
UPF3A-207ENST00000481131 CCNYL3P0C7X3 344 aa9.81□□□□□ -0.84
UPF3A-207ENST00000481131 LIAT1Q6ZQX7 453 aa9.81□□□□□ -0.84
UPF3A-207ENST00000481131 EVA1BQ9NVM1 165 aa9.81□□□□□ -0.84
UPF3A-207ENST00000481131 FBXO45P0C2W1 286 aa9.8□□□□□ -0.84
UPF3A-207ENST00000481131 CTHP32929 405 aa9.8□□□□□ -0.84
UPF3A-207ENST00000481131 GGCXP38435 758 aa9.8□□□□□ -0.84
UPF3A-207ENST00000481131 NUDT12Q9BQG2 462 aa9.8□□□□□ -0.84
UPF3A-207ENST00000481131 NRG2O14511 850 aaPredicted RBP9.79□□□□□ -0.84
UPF3A-207ENST00000481131 ANKLE1Q8NAG6 615 aa9.79□□□□□ -0.84
UPF3A-207ENST00000481131 PNMA1Q8ND90 353 aa9.79□□□□□ -0.84
UPF3A-207ENST00000481131 UCN2Q96RP3 112 aa9.79□□□□□ -0.84
UPF3A-207ENST00000481131 KCNH2Q12809 1159 aa9.78□□□□□ -0.84
UPF3A-207ENST00000481131 NR1H3Q13133 447 aa9.78□□□□□ -0.84
UPF3A-207ENST00000481131 ZBBXA8MT70 800 aa9.77□□□□□ -0.85
UPF3A-207ENST00000481131 CFAP70Q5T0N1 1121 aa9.77□□□□□ -0.85
UPF3A-207ENST00000481131 ZC3H4Q9UPT8 1303 aaKnown RBP9.77□□□□□ -0.85
UPF3A-207ENST00000481131 SOX11P35716 441 aa9.76□□□□□ -0.85
UPF3A-207ENST00000481131 SLC19A1P41440 591 aa9.76□□□□□ -0.85
UPF3A-207ENST00000481131 PTCRAQ6ISU1 281 aaPredicted RBP9.76□□□□□ -0.85
UPF3A-207ENST00000481131 TRAF7Q6Q0C0 670 aa9.76□□□□□ -0.85
UPF3A-207ENST00000481131 TRIM67Q6ZTA4 783 aa9.76□□□□□ -0.85
UPF3A-207ENST00000481131 OCSTAMPQ9BR26 566 aa9.76□□□□□ -0.85
UPF3A-207ENST00000481131 PPP1R12CQ9BZL4 782 aa9.75□□□□□ -0.85
UPF3A-207ENST00000481131 FCF1Q9Y324 198 aaKnown RBP9.75□□□□□ -0.85
UPF3A-207ENST00000481131 EIF4G2P78344 907 aaKnown RBP eCLIP9.73□□□□□ -0.85
UPF3A-207ENST00000481131 SEMA3FQ13275 785 aa9.73□□□□□ -0.85
UPF3A-207ENST00000481131 SPRYD7Q5W111 196 aa9.73□□□□□ -0.85
UPF3A-207ENST00000481131 PALM3A6NDB9 673 aaPredicted RBP9.72□□□□□ -0.85
UPF3A-207ENST00000481131 SRPK2P78362 688 aaKnown RBP9.72□□□□□ -0.85
UPF3A-207ENST00000481131 UNC93B1Q9H1C4 597 aa9.72□□□□□ -0.85
UPF3A-207ENST00000481131 RFX1P22670 979 aa9.71□□□□□ -0.86
UPF3A-207ENST00000481131 PDXDC2PQ6P474 469 aa9.71□□□□□ -0.86
UPF3A-207ENST00000481131 CCDC24Q8N4L8 307 aa9.71□□□□□ -0.86
UPF3A-207ENST00000481131 ARMC2Q8NEN0 867 aa9.71□□□□□ -0.86
UPF3A-207ENST00000481131 TFIP11Q9UBB9 837 aaKnown RBP9.71□□□□□ -0.86
UPF3A-207ENST00000481131 PDZRN3Q9UPQ7 1066 aa9.71□□□□□ -0.86
UPF3A-207ENST00000481131 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.7□□□□□ -0.86
UPF3A-207ENST00000481131 PPP1R15AO75807 674 aaPredicted RBP9.7□□□□□ -0.86
UPF3A-207ENST00000481131 TBC1D9Q6ZT07 1266 aa9.7□□□□□ -0.86
UPF3A-207ENST00000481131 GPKOWQ92917 476 aaPredicted RBP eCLIP9.7□□□□□ -0.86
UPF3A-207ENST00000481131 GPSM3Q9Y4H4 160 aa9.7□□□□□ -0.86
UPF3A-207ENST00000481131 PIK3CDO00329 1044 aa9.69□□□□□ -0.86
UPF3A-207ENST00000481131 NBPF14Q5TI25 921 aa9.69□□□□□ -0.86
UPF3A-207ENST00000481131 RETREG2Q8NC44 543 aa9.69□□□□□ -0.86
UPF3A-207ENST00000481131 PTK2Q05397 1052 aa9.68□□□□□ -0.86
UPF3A-207ENST00000481131 ZNF697Q5TEC3 545 aa9.68□□□□□ -0.86
UPF3A-207ENST00000481131 SH3BP5LQ7L8J4 393 aa9.68□□□□□ -0.86
UPF3A-207ENST00000481131 ZNF598Q86UK7 904 aaKnown RBP9.68□□□□□ -0.86
UPF3A-207ENST00000481131 PBXIP1Q96AQ6 731 aa9.68□□□□□ -0.86
UPF3A-207ENST00000481131 MAFBQ9Y5Q3 323 aaPredicted RBP9.68□□□□□ -0.86
UPF3A-207ENST00000481131 LMOD1P29536 600 aaPredicted RBP9.67□□□□□ -0.86
UPF3A-207ENST00000481131 PDIA4P13667 645 aaKnown RBP9.66□□□□□ -0.86
UPF3A-207ENST00000481131 TRIM26Q12899 539 aaPredicted RBP9.66□□□□□ -0.86
UPF3A-207ENST00000481131 ADAM32Q8TC27 787 aa9.66□□□□□ -0.86
UPF3A-207ENST00000481131 TNFRSF10AO00220 468 aa9.65□□□□□ -0.86
UPF3A-207ENST00000481131 ATP9BO43861 1147 aa9.65□□□□□ -0.86
UPF3A-207ENST00000481131 GDF9O60383 454 aa9.65□□□□□ -0.86
UPF3A-207ENST00000481131 FAM174AQ8TBP5 190 aa9.65□□□□□ -0.86
UPF3A-207ENST00000481131 BAP1Q92560 729 aa9.65□□□□□ -0.86
UPF3A-207ENST00000481131 ARHGAP9Q9BRR9 750 aa9.65□□□□□ -0.86
UPF3A-207ENST00000481131 SH3RF1Q7Z6J0 888 aa9.64□□□□□ -0.87
UPF3A-207ENST00000481131 TRAIPQ9BWF2 469 aa9.64□□□□□ -0.87
UPF3A-207ENST00000481131 PKD2L1Q9P0L9 805 aa9.64□□□□□ -0.87
UPF3A-207ENST00000481131 PCDHB9Q9Y5E1 797 aa9.64□□□□□ -0.87
UPF3A-207ENST00000481131 PRR20EP86478 221 aa9.63□□□□□ -0.87
UPF3A-207ENST00000481131 PRR20CP86479 221 aa9.63□□□□□ -0.87
UPF3A-207ENST00000481131 PRR20DP86480 221 aa9.63□□□□□ -0.87
UPF3A-207ENST00000481131 PRR20BP86481 221 aa9.63□□□□□ -0.87
UPF3A-207ENST00000481131 PRR20AP86496 221 aa9.63□□□□□ -0.87
UPF3A-207ENST00000481131 LINC01559Q495D7 138 aa9.63□□□□□ -0.87
UPF3A-207ENST00000481131 C4orf48Q5BLP8 95 aa9.63□□□□□ -0.87
UPF3A-207ENST00000481131 FOXJ1Q92949 421 aa9.63□□□□□ -0.87
UPF3A-207ENST00000481131 CEP126Q9P2H0 1117 aa9.63□□□□□ -0.87
UPF3A-207ENST00000481131 ZNF511Q8NB15 262 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms