RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 CLUAP1Q96AJ1 413 aa12.97□□□□□ -0.33
COMMD4-203ENST00000480484 WDR70Q9NW82 654 aa12.96□□□□□ -0.33
COMMD4-203ENST00000480484 ARHGAP31Q2M1Z3 1444 aa12.96□□□□□ -0.34
COMMD4-203ENST00000480484 TNNT2P45379 298 aaPredicted RBP12.96□□□□□ -0.34
COMMD4-203ENST00000480484 SPOCK2Q92563 424 aa12.96□□□□□ -0.34
COMMD4-203ENST00000480484 TRAIPQ9BWF2 469 aa12.96□□□□□ -0.34
COMMD4-203ENST00000480484 MYO3AQ8NEV4 1616 aa12.95□□□□□ -0.34
COMMD4-203ENST00000480484 IQGAP1P46940 1657 aa12.95□□□□□ -0.34
COMMD4-203ENST00000480484 BCL2L13Q9BXK5 485 aa12.95□□□□□ -0.34
COMMD4-203ENST00000480484 CFAP70Q5T0N1 1121 aa12.95□□□□□ -0.34
COMMD4-203ENST00000480484 KANK1Q14678 1352 aa12.94□□□□□ -0.34
COMMD4-203ENST00000480484 PANK1Q8TE04 598 aa12.94□□□□□ -0.34
COMMD4-203ENST00000480484 RRP7AQ9Y3A4 280 aaKnown RBP12.94□□□□□ -0.34
COMMD4-203ENST00000480484 ADGRF5Q8IZF2 1346 aa12.94□□□□□ -0.34
COMMD4-203ENST00000480484 APAF1O14727 1248 aa12.94□□□□□ -0.34
COMMD4-203ENST00000480484 L1TD1Q5T7N2 865 aaKnown RBP12.94□□□□□ -0.34
COMMD4-203ENST00000480484 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.94□□□□□ -0.34
COMMD4-203ENST00000480484 GTPBP6O43824 516 aaPredicted RBP12.94□□□□□ -0.34
COMMD4-203ENST00000480484 IRF5Q13568 498 aa12.94□□□□□ -0.34
COMMD4-203ENST00000480484 CLTCQ00610 1675 aaKnown RBP12.93□□□□□ -0.34
COMMD4-203ENST00000480484 NPATQ14207 1427 aa12.93□□□□□ -0.34
COMMD4-203ENST00000480484 PPP2R1AP30153 589 aa12.93□□□□□ -0.34
COMMD4-203ENST00000480484 BECN1Q14457 450 aa12.93□□□□□ -0.34
COMMD4-203ENST00000480484 TICAM2Q86XR7 235 aa12.93□□□□□ -0.34
COMMD4-203ENST00000480484 PNNQ9H307 717 aaKnown RBP12.93□□□□□ -0.34
COMMD4-203ENST00000480484 KDM4AO75164 1064 aa12.92□□□□□ -0.34
COMMD4-203ENST00000480484 SCAF11Q99590 1463 aaKnown RBP12.92□□□□□ -0.34
COMMD4-203ENST00000480484 USP19O94966 1318 aa12.92□□□□□ -0.34
COMMD4-203ENST00000480484 RIMS1Q86UR5 1692 aaKnown RBP12.91□□□□□ -0.34
COMMD4-203ENST00000480484 PSMD1Q99460 953 aa12.91□□□□□ -0.34
COMMD4-203ENST00000480484 WDR43Q15061 677 aaKnown RBP eCLIP12.91□□□□□ -0.34
COMMD4-203ENST00000480484 COG6Q9Y2V7 657 aa12.91□□□□□ -0.34
COMMD4-203ENST00000480484 EFCAB6Q5THR3 1501 aa12.91□□□□□ -0.34
COMMD4-203ENST00000480484 RETREG2Q8NC44 543 aa12.9□□□□□ -0.34
COMMD4-203ENST00000480484 HSP90AA2PQ14568 343 aaPredicted RBP12.9□□□□□ -0.34
COMMD4-203ENST00000480484 CFAP65Q6ZU64 1925 aaKnown RBP12.9□□□□□ -0.34
COMMD4-203ENST00000480484 KNSTRNQ9Y448 316 aa12.9□□□□□ -0.34
COMMD4-203ENST00000480484 GGT6Q6P531 493 aa12.89□□□□□ -0.35
COMMD4-203ENST00000480484 BLMP54132 1417 aaPredicted RBP12.89□□□□□ -0.35
COMMD4-203ENST00000480484 HSP90AA1P07900 732 aaKnown RBP12.89□□□□□ -0.35
COMMD4-203ENST00000480484 GOLGA2Q08379 1002 aa12.89□□□□□ -0.35
COMMD4-203ENST00000480484 PANK2Q9BZ23 570 aa12.89□□□□□ -0.35
COMMD4-203ENST00000480484 GOLGA6L3A6NEY3 463 aa12.88□□□□□ -0.35
COMMD4-203ENST00000480484 UBR1Q8IWV7 1749 aa12.88□□□□□ -0.35
COMMD4-203ENST00000480484 ABCC3O15438 1527 aa12.88□□□□□ -0.35
COMMD4-203ENST00000480484 PRDM16Q9HAZ2 1276 aa12.88□□□□□ -0.35
COMMD4-203ENST00000480484 MYOM1P52179 1685 aa12.88□□□□□ -0.35
COMMD4-203ENST00000480484 XRCC6P12956 609 aaKnown RBP eCLIP12.88□□□□□ -0.35
COMMD4-203ENST00000480484 HS6ST3Q8IZP7 471 aa12.87□□□□□ -0.35
COMMD4-203ENST00000480484 FBXW7Q969H0 707 aa12.87□□□□□ -0.35
COMMD4-203ENST00000480484 RAPGEF3O95398 923 aa12.86□□□□□ -0.35
COMMD4-203ENST00000480484 NUTM2DQ5VT03 806 aaPredicted RBP12.86□□□□□ -0.35
COMMD4-203ENST00000480484 SETD1AO15047 1707 aaKnown RBP12.86□□□□□ -0.35
COMMD4-203ENST00000480484 NOS1P29475 1434 aa12.85□□□□□ -0.35
COMMD4-203ENST00000480484 RLBP1P12271 317 aa12.85□□□□□ -0.35
COMMD4-203ENST00000480484 CANXP27824 592 aaKnown RBP12.85□□□□□ -0.35
COMMD4-203ENST00000480484 ZNF521Q96K83 1311 aa12.85□□□□□ -0.35
COMMD4-203ENST00000480484 SYNMO15061 1565 aa12.85□□□□□ -0.35
COMMD4-203ENST00000480484 SLFN5Q08AF3 891 aa12.84□□□□□ -0.35
COMMD4-203ENST00000480484 KIF1BO60333 1816 aa12.84□□□□□ -0.35
COMMD4-203ENST00000480484 UPF2Q9HAU5 1272 aaKnown RBP12.84□□□□□ -0.35
COMMD4-203ENST00000480484 ERVK-7P63135 1459 aa12.84□□□□□ -0.35
COMMD4-203ENST00000480484 LMTK3Q96Q04 1460 aa12.84□□□□□ -0.35
COMMD4-203ENST00000480484 STRCQ7RTU9 1775 aa12.83□□□□□ -0.36
COMMD4-203ENST00000480484 FAM69CQ0P6D2 419 aa12.83□□□□□ -0.36
COMMD4-203ENST00000480484 TMEM132EQ6IEE7 984 aa12.83□□□□□ -0.36
COMMD4-203ENST00000480484 CARD14Q9BXL6 1004 aa12.83□□□□□ -0.36
COMMD4-203ENST00000480484 ASXL1Q8IXJ9 1541 aa12.83□□□□□ -0.36
COMMD4-203ENST00000480484 EIF3AQ14152 1382 aaKnown RBP12.83□□□□□ -0.36
COMMD4-203ENST00000480484 TRAK1Q9UPV9 953 aa12.83□□□□□ -0.36
COMMD4-203ENST00000480484 MYOM2P54296 1465 aa12.82□□□□□ -0.36
COMMD4-203ENST00000480484 PRDM10Q9NQV6 1147 aa12.82□□□□□ -0.36
COMMD4-203ENST00000480484 CLCN1P35523 988 aa12.82□□□□□ -0.36
COMMD4-203ENST00000480484 CDCA8Q53HL2 280 aa12.82□□□□□ -0.36
COMMD4-203ENST00000480484 SETD1BQ9UPS6 1966 aaKnown RBP12.81□□□□□ -0.36
COMMD4-203ENST00000480484 PCDHB15Q9Y5E8 787 aa12.81□□□□□ -0.36
COMMD4-203ENST00000480484 TBC1D2Q9BYX2 928 aa12.81□□□□□ -0.36
COMMD4-203ENST00000480484 KIAA1210Q9ULL0 1709 aa12.81□□□□□ -0.36
COMMD4-203ENST00000480484 STAC3Q96MF2 364 aa12.81□□□□□ -0.36
COMMD4-203ENST00000480484 ANTXR1Q9H6X2 564 aa12.81□□□□□ -0.36
COMMD4-203ENST00000480484 RRP9O43818 475 aaKnown RBP12.8□□□□□ -0.36
COMMD4-203ENST00000480484 CCDC27Q2M243 656 aa12.8□□□□□ -0.36
COMMD4-203ENST00000480484 ADGRB3O60242 1522 aa12.8□□□□□ -0.36
COMMD4-203ENST00000480484 KNDC1Q76NI1 1749 aa12.8□□□□□ -0.36
COMMD4-203ENST00000480484 SLIT1O75093 1534 aa12.79□□□□□ -0.36
COMMD4-203ENST00000480484 YEATS2Q9ULM3 1422 aa12.79□□□□□ -0.36
COMMD4-203ENST00000480484 MAPK8IP3Q9UPT6 1336 aa12.79□□□□□ -0.36
COMMD4-203ENST00000480484 MCM4P33991 863 aa12.79□□□□□ -0.36
COMMD4-203ENST00000480484 DIP2AQ14689 1571 aa12.79□□□□□ -0.36
COMMD4-203ENST00000480484 NWD1Q149M9 1564 aa12.78□□□□□ -0.36
COMMD4-203ENST00000480484 RNF25Q96BH1 459 aaPredicted RBP12.78□□□□□ -0.36
COMMD4-203ENST00000480484 NRXN1Q9ULB1 1477 aa12.78□□□□□ -0.36
COMMD4-203ENST00000480484 PPLO60437 1756 aa12.78□□□□□ -0.36
COMMD4-203ENST00000480484 SMARCA5O60264 1052 aaPredicted RBP12.77□□□□□ -0.36
COMMD4-203ENST00000480484 TRAK2O60296 914 aa12.77□□□□□ -0.36
COMMD4-203ENST00000480484 KDM4CQ9H3R0 1056 aa12.77□□□□□ -0.36
COMMD4-203ENST00000480484 MYH16Q9H6N6 1097 aa12.77□□□□□ -0.36
COMMD4-203ENST00000480484 CLSTN1O94985 981 aa12.77□□□□□ -0.37
COMMD4-203ENST00000480484 TMEM131LA2VDJ0 1609 aa12.77□□□□□ -0.37
COMMD4-203ENST00000480484 IQSEC2Q5JU85 1478 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms