RNA–Protein interactions for RNA: ENST00000478717.5

PDE8A-204, Transcript of phosphodiesterase 8A, humanhuman

TSL 1 (best)

Gene PDE8A, Length 2,722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-204ENST00000478717 CABP1Q9NZU7 370 aa23.15■■□□□ 1.3
PDE8A-204ENST00000478717 CLUAP1Q96AJ1 413 aa23.14■■□□□ 1.3
PDE8A-204ENST00000478717 TERF2IPQ9NYB0 399 aa23.14■■□□□ 1.3
PDE8A-204ENST00000478717 RLBP1P12271 317 aa23.14■■□□□ 1.29
PDE8A-204ENST00000478717 CCDC27Q2M243 656 aa23.13■■□□□ 1.29
PDE8A-204ENST00000478717 WAPLQ7Z5K2 1190 aa23.13■■□□□ 1.29
PDE8A-204ENST00000478717 FBLN1P23142 703 aa23.12■■□□□ 1.29
PDE8A-204ENST00000478717 TSR2Q969E8 191 aaKnown RBP23.11■■□□□ 1.29
PDE8A-204ENST00000478717 ATAD2Q6PL18 1390 aa23.1■■□□□ 1.29
PDE8A-204ENST00000478717 HSP90AA2PQ14568 343 aaPredicted RBP23.1■■□□□ 1.29
PDE8A-204ENST00000478717 PLEKHF1Q96S99 279 aa23.1■■□□□ 1.29
PDE8A-204ENST00000478717 SEC24BO95487 1268 aa23.09■■□□□ 1.29
PDE8A-204ENST00000478717 PANK2Q9BZ23 570 aa23.09■■□□□ 1.29
PDE8A-204ENST00000478717 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.09■■□□□ 1.299e-7■■■□□ 14.8
PDE8A-204ENST00000478717 GZF1Q9H116 711 aaPredicted RBP23.08■■□□□ 1.29
PDE8A-204ENST00000478717 MYH16Q9H6N6 1097 aa23.08■■□□□ 1.29
PDE8A-204ENST00000478717 CD163L1Q9NR16 1453 aa23.08■■□□□ 1.28
PDE8A-204ENST00000478717 NINLQ9Y2I6 1382 aa23.08■■□□□ 1.28
PDE8A-204ENST00000478717 TSPOAP1O95153 1857 aa23.08■■□□□ 1.28
PDE8A-204ENST00000478717 HDGFL2Q7Z4V5 671 aaPredicted RBP23.08■■□□□ 1.28
PDE8A-204ENST00000478717 PNNQ9H307 717 aaKnown RBP23.07■■□□□ 1.28
PDE8A-204ENST00000478717 TMPOP42166 694 aaKnown RBP23.07■■□□□ 1.28
PDE8A-204ENST00000478717 ALKQ9UM73 1620 aa23.07■■□□□ 1.28
PDE8A-204ENST00000478717 PCDHB15Q9Y5E8 787 aa23.06■■□□□ 1.28
PDE8A-204ENST00000478717 XRCC6P12956 609 aaKnown RBP eCLIP23.05■■□□□ 1.28
PDE8A-204ENST00000478717 TRIM35Q9UPQ4 493 aa23.05■■□□□ 1.28
PDE8A-204ENST00000478717 USP19O94966 1318 aa23.04■■□□□ 1.28
PDE8A-204ENST00000478717 MAPK8IP3Q9UPT6 1336 aa23.03■■□□□ 1.28
PDE8A-204ENST00000478717 HSP90AA1P07900 732 aaKnown RBP23.03■■□□□ 1.28
PDE8A-204ENST00000478717 EXOSC9Q06265 439 aaKnown RBP23.03■■□□□ 1.28
PDE8A-204ENST00000478717 SPRYD3Q8NCJ5 442 aa23.03■■□□□ 1.28
PDE8A-204ENST00000478717 DIAPH1O60610 1272 aaKnown RBP23.02■■□□□ 1.28
PDE8A-204ENST00000478717 L1TD1Q5T7N2 865 aaKnown RBP23.02■■□□□ 1.28
PDE8A-204ENST00000478717 NLRP1Q9C000 1473 aa23.01■■□□□ 1.27
PDE8A-204ENST00000478717 RIPK4P57078 832 aa23.01■■□□□ 1.27
PDE8A-204ENST00000478717 ARHGEF40Q8TER5 1519 aa23.01■■□□□ 1.27
PDE8A-204ENST00000478717 A2ML1A8K2U0 1454 aa22.98■■□□□ 1.27
PDE8A-204ENST00000478717 COL3A1P02461 1466 aaPredicted RBP22.98■■□□□ 1.27
PDE8A-204ENST00000478717 DIP2BQ9P265 1576 aa22.98■■□□□ 1.27
PDE8A-204ENST00000478717 NCBP3Q53F19 620 aaKnown RBP22.98■■□□□ 1.27
PDE8A-204ENST00000478717 SMC4Q9NTJ3 1288 aa22.97■■□□□ 1.27
PDE8A-204ENST00000478717 RIMS2Q9UQ26 1411 aa22.97■■□□□ 1.27
PDE8A-204ENST00000478717 TXNDC2Q86VQ3 553 aa22.96■■□□□ 1.27
PDE8A-204ENST00000478717 PPP6R1Q9UPN7 881 aa22.96■■□□□ 1.27
PDE8A-204ENST00000478717 ZKSCAN2Q63HK3 967 aa22.96■■□□□ 1.27
PDE8A-204ENST00000478717 FTSJ3Q8IY81 847 aaKnown RBP22.96■■□□□ 1.27
PDE8A-204ENST00000478717 POLKQ9UBT6 870 aa22.96■■□□□ 1.27
PDE8A-204ENST00000478717 RIMBP3CA6NJZ7 1639 aa22.96■■□□□ 1.27
PDE8A-204ENST00000478717 RIMBP3BA6NNM3 1639 aa22.96■■□□□ 1.27
PDE8A-204ENST00000478717 RIMBP3Q9UFD9 1639 aa22.96■■□□□ 1.27
PDE8A-204ENST00000478717 NCKAP5LQ9HCH0 1330 aa22.96■■□□□ 1.27
PDE8A-204ENST00000478717 PMFBP1Q8TBY8 1022 aa22.95■■□□□ 1.27
PDE8A-204ENST00000478717 SSH1Q8WYL5 1049 aa22.95■■□□□ 1.27
PDE8A-204ENST00000478717 CLTCQ00610 1675 aaKnown RBP22.95■■□□□ 1.27
PDE8A-204ENST00000478717 ADGRB2O60241 1585 aa22.95■■□□□ 1.26
PDE8A-204ENST00000478717 GOLGA6L3A6NEY3 463 aa22.95■■□□□ 1.26
PDE8A-204ENST00000478717 DZIP1LQ8IYY4 767 aaKnown RBP22.95■■□□□ 1.26
PDE8A-204ENST00000478717 MVPQ14764 893 aaKnown RBP22.94■■□□□ 1.26
PDE8A-204ENST00000478717 ZRANB1Q9UGI0 708 aa22.94■■□□□ 1.26
PDE8A-204ENST00000478717 PNPLA6Q8IY17 1366 aa22.93■■□□□ 1.26
PDE8A-204ENST00000478717 HMOX1P09601 288 aa22.93■■□□□ 1.26
PDE8A-204ENST00000478717 CLCN1P35523 988 aa22.93■■□□□ 1.26
PDE8A-204ENST00000478717 RRP9O43818 475 aaKnown RBP22.93■■□□□ 1.26
PDE8A-204ENST00000478717 TRIM27P14373 513 aa22.92■■□□□ 1.26
PDE8A-204ENST00000478717 PRKAR2BP31323 418 aa22.92■■□□□ 1.26
PDE8A-204ENST00000478717 MED14O60244 1454 aa22.92■■□□□ 1.26
PDE8A-204ENST00000478717 ESF1Q9H501 851 aaKnown RBP22.92■■□□□ 1.26
PDE8A-204ENST00000478717 PDZRN3Q9UPQ7 1066 aa22.92■■□□□ 1.26
PDE8A-204ENST00000478717 METP08581 1390 aa22.92■■□□□ 1.26
PDE8A-204ENST00000478717 EMILIN1Q9Y6C2 1016 aa22.91■■□□□ 1.26
PDE8A-204ENST00000478717 BECN1Q14457 450 aa22.91■■□□□ 1.26
PDE8A-204ENST00000478717 NME9Q86XW9 330 aa22.91■■□□□ 1.26
PDE8A-204ENST00000478717 ANTXR1Q9H6X2 564 aa22.91■■□□□ 1.26
PDE8A-204ENST00000478717 NOB1Q9ULX3 412 aaKnown RBP22.9■■□□□ 1.26
PDE8A-204ENST00000478717 WASLO00401 505 aaPredicted RBP22.9■■□□□ 1.26
PDE8A-204ENST00000478717 FCHSD2O94868 740 aa22.9■■□□□ 1.26
PDE8A-204ENST00000478717 PHACTR3Q96KR7 559 aa22.9■■□□□ 1.26
PDE8A-204ENST00000478717 RWDD1Q9H446 243 aaPredicted RBP22.89■■□□□ 1.26
PDE8A-204ENST00000478717 AGLP35573 1532 aa22.89■■□□□ 1.26
PDE8A-204ENST00000478717 AAMPQ13685 434 aa22.89■■□□□ 1.25
PDE8A-204ENST00000478717 CT47B1P0C2W7 299 aaPredicted RBP22.88■■□□□ 1.25
PDE8A-204ENST00000478717 ITPRIPQ8IWB1 547 aa22.88■■□□□ 1.25
PDE8A-204ENST00000478717 THUMPD2Q9BTF0 503 aaKnown RBP22.88■■□□□ 1.25
PDE8A-204ENST00000478717 ZMYM3Q14202 1370 aa22.87■■□□□ 1.25
PDE8A-204ENST00000478717 SPATA31D1Q6ZQQ2 1576 aa22.87■■□□□ 1.25
PDE8A-204ENST00000478717 ATF7IPQ6VMQ6 1270 aa22.87■■□□□ 1.25
PDE8A-204ENST00000478717 NUDT16Q96DE0 195 aaKnown RBP22.86■■□□□ 1.25
PDE8A-204ENST00000478717 IL16Q14005 1332 aa22.85■■□□□ 1.25
PDE8A-204ENST00000478717 FSD2A1L4K1 749 aa22.85■■□□□ 1.25
PDE8A-204ENST00000478717 ANKRD26Q9UPS8 1709 aa22.85■■□□□ 1.25
PDE8A-204ENST00000478717 PPIP5K1Q6PFW1 1433 aa22.85■■□□□ 1.25
PDE8A-204ENST00000478717 RRS1Q15050 365 aaKnown RBP22.84■■□□□ 1.25
PDE8A-204ENST00000478717 ERBB4Q15303 1308 aa22.84■■□□□ 1.25
PDE8A-204ENST00000478717 TBC1D2Q9BYX2 928 aa22.84■■□□□ 1.25
PDE8A-204ENST00000478717 TMEM57Q8N5G2 664 aa22.83■■□□□ 1.25
PDE8A-204ENST00000478717 REREQ9P2R6 1566 aa22.83■■□□□ 1.25
PDE8A-204ENST00000478717 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.83■■□□□ 1.24
PDE8A-204ENST00000478717 DLC1Q96QB1 1528 aa22.82■■□□□ 1.24
PDE8A-204ENST00000478717 ATP7BP35670 1465 aa22.81■■□□□ 1.24
PDE8A-204ENST00000478717 CCDC61Q9Y6R9 512 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms