RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 CD163L1Q9NR16 1453 aa21.28■■□□□ 1
SEC13-215ENST00000477547 PMFBP1Q8TBY8 1022 aa21.28■■□□□ 1
SEC13-215ENST00000477547 TMC1Q8TDI8 760 aa21.28■■□□□ 1
SEC13-215ENST00000477547 PNPLA6Q8IY17 1366 aa21.27■■□□□ 1
SEC13-215ENST00000477547 KIF20BQ96Q89 1820 aa21.27■■□□□ 1
SEC13-215ENST00000477547 WASHC2AQ641Q2 1341 aa21.27■■□□□ 1
SEC13-215ENST00000477547 ADAMTS2O95450 1211 aa21.26■□□□□ 0.99
SEC13-215ENST00000477547 CABP1Q9NZU7 370 aa21.26■□□□□ 0.99
SEC13-215ENST00000477547 ALS2Q96Q42 1657 aa21.26■□□□□ 0.99
SEC13-215ENST00000477547 NPHP3Q7Z494 1330 aa21.25■□□□□ 0.99
SEC13-215ENST00000477547 A0A1W2PP64 1363 aa21.25■□□□□ 0.99
SEC13-215ENST00000477547 CPSF1Q10570 1443 aaKnown RBP21.24■□□□□ 0.99
SEC13-215ENST00000477547 PLEKHG3A1L390 1219 aa21.24■□□□□ 0.99
SEC13-215ENST00000477547 NGDNQ8NEJ9 315 aaKnown RBP21.24■□□□□ 0.99
SEC13-215ENST00000477547 NGLY1Q96IV0 654 aa21.24■□□□□ 0.99
SEC13-215ENST00000477547 ANKRD36BQ8N2N9 1353 aa21.24■□□□□ 0.99
SEC13-215ENST00000477547 ACEP12821 1306 aa21.23■□□□□ 0.99
SEC13-215ENST00000477547 USP6P35125 1406 aa21.23■□□□□ 0.99
SEC13-215ENST00000477547 PIK3C2AO00443 1686 aa21.22■□□□□ 0.99
SEC13-215ENST00000477547 FOXO3O43524 673 aa21.22■□□□□ 0.99
SEC13-215ENST00000477547 SLC12A5Q9H2X9 1139 aa21.22■□□□□ 0.99
SEC13-215ENST00000477547 ABCA3Q99758 1704 aa21.2■□□□□ 0.98
SEC13-215ENST00000477547 KTN1Q86UP2 1357 aaKnown RBP21.2■□□□□ 0.98
SEC13-215ENST00000477547 XPCQ01831 940 aaPredicted RBP21.2■□□□□ 0.98
SEC13-215ENST00000477547 TERF2IPQ9NYB0 399 aa21.2■□□□□ 0.98
SEC13-215ENST00000477547 ANKRD26Q9UPS8 1709 aa21.19■□□□□ 0.98
SEC13-215ENST00000477547 HDGFL2Q7Z4V5 671 aaPredicted RBP21.19■□□□□ 0.98
SEC13-215ENST00000477547 MARF1Q9Y4F3 1742 aaKnown RBP21.19■□□□□ 0.98
SEC13-215ENST00000477547 USP54Q70EL1 1684 aa21.18■□□□□ 0.98
SEC13-215ENST00000477547 CRYBG1Q9Y4K1 1723 aa21.18■□□□□ 0.98
SEC13-215ENST00000477547 TNS3Q68CZ2 1445 aa21.18■□□□□ 0.98
SEC13-215ENST00000477547 EDC4Q6P2E9 1401 aaKnown RBP21.18■□□□□ 0.98
SEC13-215ENST00000477547 ZRANB1Q9UGI0 708 aa21.18■□□□□ 0.98
SEC13-215ENST00000477547 COL22A1Q8NFW1 1626 aaPredicted RBP21.17■□□□□ 0.98
SEC13-215ENST00000477547 ZNF316A6NFI3 1004 aaPredicted RBP21.17■□□□□ 0.98
SEC13-215ENST00000477547 PSME1Q06323 249 aa21.17■□□□□ 0.98
SEC13-215ENST00000477547 USP21Q9UK80 565 aa21.17■□□□□ 0.98
SEC13-215ENST00000477547 SOS2Q07890 1332 aaPredicted RBP21.17■□□□□ 0.98
SEC13-215ENST00000477547 NSD3Q9BZ95 1437 aa21.16■□□□□ 0.98
SEC13-215ENST00000477547 BRD4O60885 1362 aaPredicted RBP21.16■□□□□ 0.98
SEC13-215ENST00000477547 PHRF1Q9P1Y6 1649 aaKnown RBP21.16■□□□□ 0.98
SEC13-215ENST00000477547 KRT28Q7Z3Y7 464 aa21.15■□□□□ 0.98
SEC13-215ENST00000477547 SBNO1A3KN83 1393 aa21.15■□□□□ 0.98
SEC13-215ENST00000477547 SSH2Q76I76 1423 aa21.15■□□□□ 0.98
SEC13-215ENST00000477547 ZNF692Q9BU19 519 aaPredicted RBP21.13■□□□□ 0.97
SEC13-215ENST00000477547 TRPC5Q9UL62 973 aaPredicted RBP21.13■□□□□ 0.97
SEC13-215ENST00000477547 EP400Q96L91 3159 aa21.13■□□□□ 0.97
SEC13-215ENST00000477547 ARHGEF10O15013 1369 aa21.1■□□□□ 0.97
SEC13-215ENST00000477547 PAK3O75914 559 aaPredicted RBP21.1■□□□□ 0.97
SEC13-215ENST00000477547 PANK3Q9H999 370 aa21.1■□□□□ 0.97
SEC13-215ENST00000477547 ATRNO75882 1429 aa21.09■□□□□ 0.97
SEC13-215ENST00000477547 SPATA31A3Q5VYP0 1347 aa21.09■□□□□ 0.97
SEC13-215ENST00000477547 TTC21AQ8NDW8 1320 aa21.09■□□□□ 0.97
SEC13-215ENST00000477547 FNBP4Q8N3X1 1017 aaPredicted RBP21.09■□□□□ 0.97
SEC13-215ENST00000477547 TTC21BQ7Z4L5 1316 aa21.08■□□□□ 0.97
SEC13-215ENST00000477547 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.07■□□□□ 0.96
SEC13-215ENST00000477547 CARD14Q9BXL6 1004 aa21.06■□□□□ 0.96
SEC13-215ENST00000477547 LMOD2Q6P5Q4 547 aa21.05■□□□□ 0.96
SEC13-215ENST00000477547 OVOS2A0A0J9YW53 1432 aa21.05■□□□□ 0.96
SEC13-215ENST00000477547 OVOS2Q6IE36 1432 aa21.05■□□□□ 0.96
SEC13-215ENST00000477547 SLIT3O75094 1523 aa21.05■□□□□ 0.96
SEC13-215ENST00000477547 LTN1O94822 1766 aa21.03■□□□□ 0.96
SEC13-215ENST00000477547 CGNL1Q0VF96 1302 aa21.03■□□□□ 0.96
SEC13-215ENST00000477547 DDX10Q13206 875 aaKnown RBP21.03■□□□□ 0.96
SEC13-215ENST00000477547 NME9Q86XW9 330 aa21.03■□□□□ 0.96
SEC13-215ENST00000477547 ABTB2Q8N961 1025 aa21.03■□□□□ 0.96
SEC13-215ENST00000477547 CCDC125Q86Z20 511 aa21.02■□□□□ 0.95
SEC13-215ENST00000477547 NSD2O96028 1365 aa21.01■□□□□ 0.95
SEC13-215ENST00000477547 BCL9LQ86UU0 1499 aa21.01■□□□□ 0.95
SEC13-215ENST00000477547 NUTM2GQ5VZR2 741 aa21.01■□□□□ 0.95
SEC13-215ENST00000477547 KNSTRNQ9Y448 316 aa21.01■□□□□ 0.95
SEC13-215ENST00000477547 USP31Q70CQ4 1352 aa21■□□□□ 0.95
SEC13-215ENST00000477547 USP19O94966 1318 aa20.99■□□□□ 0.95
SEC13-215ENST00000477547 NFAT5O94916 1531 aa20.99■□□□□ 0.95
SEC13-215ENST00000477547 PLEKHG5O94827 1062 aa20.98■□□□□ 0.95
SEC13-215ENST00000477547 NLRP6P59044 892 aa20.98■□□□□ 0.95
SEC13-215ENST00000477547 GJD4Q96KN9 370 aaPredicted RBP20.98■□□□□ 0.95
SEC13-215ENST00000477547 PLCH1Q4KWH8 1693 aa20.97■□□□□ 0.95
SEC13-215ENST00000477547 PER1O15534 1290 aaPredicted RBP20.97■□□□□ 0.95
SEC13-215ENST00000477547 NLRP13Q86W25 1043 aa20.97■□□□□ 0.95
SEC13-215ENST00000477547 GGNBP2Q9H3C7 697 aa20.97■□□□□ 0.95
SEC13-215ENST00000477547 FYB1O15117 783 aa20.96■□□□□ 0.95
SEC13-215ENST00000477547 DEFB132Q7Z7B7 95 aa20.96■□□□□ 0.95
SEC13-215ENST00000477547 MAP2P11137 1827 aaKnown RBP20.95■□□□□ 0.95
SEC13-215ENST00000477547 AMER1Q5JTC6 1135 aaPredicted RBP20.95■□□□□ 0.94
SEC13-215ENST00000477547 COG3Q96JB2 828 aa20.95■□□□□ 0.94
SEC13-215ENST00000477547 NPC1L1Q9UHC9 1359 aa20.94■□□□□ 0.94
SEC13-215ENST00000477547 COL14A1Q05707 1796 aaKnown RBP20.93■□□□□ 0.94
SEC13-215ENST00000477547 HAP1P54257 671 aaPredicted RBP20.93■□□□□ 0.94
SEC13-215ENST00000477547 CABLES1Q8TDN4 633 aa20.93■□□□□ 0.94
SEC13-215ENST00000477547 BLMP54132 1417 aaPredicted RBP20.92■□□□□ 0.94
SEC13-215ENST00000477547 RGPD5Q99666 1765 aa20.92■□□□□ 0.94
SEC13-215ENST00000477547 CC2D1BQ5T0F9 858 aaKnown RBP20.91■□□□□ 0.94
SEC13-215ENST00000477547 GLI3P10071 1580 aa20.91■□□□□ 0.94
SEC13-215ENST00000477547 SOX12O15370 315 aa20.9■□□□□ 0.94
SEC13-215ENST00000477547 CNGB1Q14028 1251 aaPredicted RBP20.9■□□□□ 0.94
SEC13-215ENST00000477547 LMO7Q8WWI1 1683 aa20.9■□□□□ 0.94
SEC13-215ENST00000477547 PEAK1Q9H792 1746 aa20.9■□□□□ 0.94
SEC13-215ENST00000477547 NWD2Q9ULI1 1742 aa20.9■□□□□ 0.94
SEC13-215ENST00000477547 BRWD3Q6RI45 1802 aa20.89■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms