RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 DIAPH1O60610 1272 aaKnown RBP17.42■□□□□ 0.38
HDAC7-221ENST00000477203 TNNQ9UQP3 1299 aa17.42■□□□□ 0.38
HDAC7-221ENST00000477203 AMOTL2Q9Y2J4 779 aa17.42■□□□□ 0.38
HDAC7-221ENST00000477203 PRR36Q9H6K5 1346 aa17.42■□□□□ 0.38
HDAC7-221ENST00000477203 PANK1Q8TE04 598 aa17.41■□□□□ 0.38
HDAC7-221ENST00000477203 CCDC61Q9Y6R9 512 aa17.41■□□□□ 0.38
HDAC7-221ENST00000477203 NUTM2GQ5VZR2 741 aa17.41■□□□□ 0.38
HDAC7-221ENST00000477203 PUS7Q96PZ0 661 aaKnown RBP17.4■□□□□ 0.38
HDAC7-221ENST00000477203 NPM2Q86SE8 214 aaKnown RBP17.4■□□□□ 0.38
HDAC7-221ENST00000477203 THUMPD2Q9BTF0 503 aaKnown RBP17.4■□□□□ 0.38
HDAC7-221ENST00000477203 POLKQ9UBT6 870 aa17.4■□□□□ 0.38
HDAC7-221ENST00000477203 COG6Q9Y2V7 657 aa17.38■□□□□ 0.37
HDAC7-221ENST00000477203 RIPK4P57078 832 aa17.38■□□□□ 0.37
HDAC7-221ENST00000477203 NRXN3Q9Y4C0 1643 aa17.38■□□□□ 0.37
HDAC7-221ENST00000477203 SHPRHQ149N8 1683 aa17.37■□□□□ 0.37
HDAC7-221ENST00000477203 EIF5BO60841 1220 aaKnown RBP17.37■□□□□ 0.37
HDAC7-221ENST00000477203 PRKAR2BP31323 418 aa17.37■□□□□ 0.37
HDAC7-221ENST00000477203 COG3Q96JB2 828 aa17.37■□□□□ 0.37
HDAC7-221ENST00000477203 PAK3O75914 559 aaPredicted RBP17.36■□□□□ 0.37
HDAC7-221ENST00000477203 C14orf37Q86TY3 774 aa17.36■□□□□ 0.37
HDAC7-221ENST00000477203 TMPOP42166 694 aaKnown RBP17.36■□□□□ 0.37
HDAC7-221ENST00000477203 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.36■□□□□ 0.37
HDAC7-221ENST00000477203 NKTRP30414 1462 aaKnown RBP17.36■□□□□ 0.37
HDAC7-221ENST00000477203 NSD2O96028 1365 aa17.35■□□□□ 0.37
HDAC7-221ENST00000477203 INSRP06213 1382 aa17.35■□□□□ 0.37
HDAC7-221ENST00000477203 ACEP12821 1306 aa17.35■□□□□ 0.37
HDAC7-221ENST00000477203 TRMT2AQ8IZ69 625 aaKnown RBP17.35■□□□□ 0.37
HDAC7-221ENST00000477203 TCERG1O14776 1098 aaKnown RBP17.34■□□□□ 0.37
HDAC7-221ENST00000477203 PHACTR3Q96KR7 559 aa17.34■□□□□ 0.37
HDAC7-221ENST00000477203 ELL2O00472 640 aaPredicted RBP17.34■□□□□ 0.37
HDAC7-221ENST00000477203 ADAMTS13Q76LX8 1427 aa17.34■□□□□ 0.37
HDAC7-221ENST00000477203 THEMISQ8N1K5 641 aaPredicted RBP17.34■□□□□ 0.37
HDAC7-221ENST00000477203 NINLQ9Y2I6 1382 aa17.34■□□□□ 0.37
HDAC7-221ENST00000477203 UBR1Q8IWV7 1749 aa17.34■□□□□ 0.37
HDAC7-221ENST00000477203 RGS3P49796 1198 aa17.34■□□□□ 0.37
HDAC7-221ENST00000477203 NGDNQ8NEJ9 315 aaKnown RBP17.34■□□□□ 0.37
HDAC7-221ENST00000477203 KCNA6P17658 529 aa17.33■□□□□ 0.36
HDAC7-221ENST00000477203 SETD1AO15047 1707 aaKnown RBP17.32■□□□□ 0.36
HDAC7-221ENST00000477203 EXOSC9Q06265 439 aaKnown RBP17.32■□□□□ 0.36
HDAC7-221ENST00000477203 RTL5Q5HYW3 569 aaPredicted RBP17.32■□□□□ 0.36
HDAC7-221ENST00000477203 ZBTB7CA1YPR0 619 aa17.31■□□□□ 0.36
HDAC7-221ENST00000477203 PTPRUQ92729 1446 aa17.31■□□□□ 0.36
HDAC7-221ENST00000477203 NLRP1Q9C000 1473 aa17.31■□□□□ 0.36
HDAC7-221ENST00000477203 PLEKHF1Q96S99 279 aa17.31■□□□□ 0.36
HDAC7-221ENST00000477203 TRIM35Q9UPQ4 493 aa17.31■□□□□ 0.36
HDAC7-221ENST00000477203 NEFMP07197 916 aa17.3■□□□□ 0.36
HDAC7-221ENST00000477203 DCTN1Q14203 1278 aa17.3■□□□□ 0.36
HDAC7-221ENST00000477203 NOP58Q9Y2X3 529 aaKnown RBP17.3■□□□□ 0.36
HDAC7-221ENST00000477203 MAP2P11137 1827 aaKnown RBP17.3■□□□□ 0.36
HDAC7-221ENST00000477203 CPS1P31327 1500 aa17.3■□□□□ 0.36
HDAC7-221ENST00000477203 C3P01024 1663 aa17.29■□□□□ 0.36
HDAC7-221ENST00000477203 RLBP1P12271 317 aa17.29■□□□□ 0.36
HDAC7-221ENST00000477203 RARSP54136 660 aaKnown RBP17.29■□□□□ 0.36
HDAC7-221ENST00000477203 FAM83GA6ND36 823 aa17.29■□□□□ 0.36
HDAC7-221ENST00000477203 AEBP1Q8IUX7 1158 aa17.29■□□□□ 0.36
HDAC7-221ENST00000477203 FER1L4A9Z1Z3 1794 aa17.28■□□□□ 0.36
HDAC7-221ENST00000477203 USP32Q8NFA0 1604 aa17.27■□□□□ 0.36
HDAC7-221ENST00000477203 PLEKHG1Q9ULL1 1385 aa17.27■□□□□ 0.36
HDAC7-221ENST00000477203 HSP90AB2PQ58FF8 381 aa17.27■□□□□ 0.35
HDAC7-221ENST00000477203 MYH16Q9H6N6 1097 aa17.27■□□□□ 0.35
HDAC7-221ENST00000477203 TTC21BQ7Z4L5 1316 aa17.26■□□□□ 0.35
HDAC7-221ENST00000477203 WDR63Q8IWG1 891 aa17.26■□□□□ 0.35
HDAC7-221ENST00000477203 SMC4Q9NTJ3 1288 aa17.26■□□□□ 0.35
HDAC7-221ENST00000477203 LTV1Q96GA3 475 aaPredicted RBP17.26■□□□□ 0.35
HDAC7-221ENST00000477203 DLC1Q96QB1 1528 aa17.26■□□□□ 0.35
HDAC7-221ENST00000477203 UBE2Q2Q8WVN8 375 aa17.25■□□□□ 0.35
HDAC7-221ENST00000477203 XPCQ01831 940 aaPredicted RBP17.25■□□□□ 0.35
HDAC7-221ENST00000477203 RSPH6AQ9H0K4 717 aa17.25■□□□□ 0.35
HDAC7-221ENST00000477203 EDC4Q6P2E9 1401 aaKnown RBP17.25■□□□□ 0.35
HDAC7-221ENST00000477203 SULT6B1Q6IMI4 303 aa17.24■□□□□ 0.35
HDAC7-221ENST00000477203 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.24■□□□□ 0.35
HDAC7-221ENST00000477203 KIF20BQ96Q89 1820 aa17.24■□□□□ 0.35
HDAC7-221ENST00000477203 ATP7BP35670 1465 aa17.24■□□□□ 0.35
HDAC7-221ENST00000477203 IQSEC2Q5JU85 1478 aa17.24■□□□□ 0.35
HDAC7-221ENST00000477203 CPSF1Q10570 1443 aaKnown RBP17.23■□□□□ 0.35
HDAC7-221ENST00000477203 IGHDP01880 384 aa17.23■□□□□ 0.35
HDAC7-221ENST00000477203 IL13P35225 146 aa17.23■□□□□ 0.35
HDAC7-221ENST00000477203 LMOD2Q6P5Q4 547 aa17.23■□□□□ 0.35
HDAC7-221ENST00000477203 ZNF692Q9BU19 519 aaPredicted RBP17.23■□□□□ 0.35
HDAC7-221ENST00000477203 PHF23Q9BUL5 403 aaPredicted RBP17.23■□□□□ 0.35
HDAC7-221ENST00000477203 FTSJ3Q8IY81 847 aaKnown RBP17.22■□□□□ 0.35
HDAC7-221ENST00000477203 TBX22Q9Y458 520 aa17.22■□□□□ 0.35
HDAC7-221ENST00000477203 COL3A1P02461 1466 aaPredicted RBP17.22■□□□□ 0.35
HDAC7-221ENST00000477203 FAM135BQ49AJ0 1406 aa17.22■□□□□ 0.35
HDAC7-221ENST00000477203 FCHSD2O94868 740 aa17.22■□□□□ 0.35
HDAC7-221ENST00000477203 SETD1BQ9UPS6 1966 aaKnown RBP17.22■□□□□ 0.35
HDAC7-221ENST00000477203 NLRP6P59044 892 aa17.21■□□□□ 0.35
HDAC7-221ENST00000477203 NGEFQ8N5V2 710 aa17.21■□□□□ 0.35
HDAC7-221ENST00000477203 SSH1Q8WYL5 1049 aa17.21■□□□□ 0.35
HDAC7-221ENST00000477203 PDE4AP27815 886 aa17.21■□□□□ 0.35
HDAC7-221ENST00000477203 EIF4A2Q14240 407 aaKnown RBP17.2■□□□□ 0.34
HDAC7-221ENST00000477203 ANKLE2Q86XL3 938 aa17.2■□□□□ 0.34
HDAC7-221ENST00000477203 CCDC27Q2M243 656 aa17.19■□□□□ 0.34
HDAC7-221ENST00000477203 RGPD8O14715 1765 aaPredicted RBP17.19■□□□□ 0.34
HDAC7-221ENST00000477203 RIMS1Q86UR5 1692 aaKnown RBP17.19■□□□□ 0.34
HDAC7-221ENST00000477203 TSPYL6Q8N831 410 aa17.19■□□□□ 0.34
HDAC7-221ENST00000477203 TECPR2O15040 1411 aa17.18■□□□□ 0.34
HDAC7-221ENST00000477203 AMPHP49418 695 aa17.18■□□□□ 0.34
HDAC7-221ENST00000477203 ITPRIPQ8IWB1 547 aa17.18■□□□□ 0.34
HDAC7-221ENST00000477203 LRRC7Q96NW7 1537 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms